RNA–Protein interactions for RNA: ENST00000554546.5

NUMB-212, Transcript of NUMB, endocytic adaptor protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NUMB, Length 3,607 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-212ENST00000554546 H3BQF6 201 aa13.26□□□□□ -0.29
NUMB-212ENST00000554546 IBSPP21815 317 aaPredicted RBP13.26□□□□□ -0.29
NUMB-212ENST00000554546 VEZTQ9HBM0 779 aa13.26□□□□□ -0.29
NUMB-212ENST00000554546 CPSF2Q9P2I0 782 aaKnown RBP13.26□□□□□ -0.29
NUMB-212ENST00000554546 CLASP1Q7Z460 1538 aa13.26□□□□□ -0.29
NUMB-212ENST00000554546 CTAGE5O15320 804 aa13.25□□□□□ -0.29
NUMB-212ENST00000554546 ATP8B1O43520 1251 aa13.25□□□□□ -0.29
NUMB-212ENST00000554546 DHX8Q14562 1220 aaKnown RBP13.25□□□□□ -0.29
NUMB-212ENST00000554546 ETAA1Q9NY74 926 aa13.25□□□□□ -0.29
NUMB-212ENST00000554546 FIBPO43427 364 aa13.25□□□□□ -0.29
NUMB-212ENST00000554546 CTCFLQ8NI51 663 aaPredicted RBP13.25□□□□□ -0.29
NUMB-212ENST00000554546 CASKIN1Q8WXD9 1431 aa13.25□□□□□ -0.29
NUMB-212ENST00000554546 GCC2Q8IWJ2 1684 aa13.25□□□□□ -0.29
NUMB-212ENST00000554546 FMNL3Q8IVF7 1028 aa13.25□□□□□ -0.29
NUMB-212ENST00000554546 LRRC8AQ8IWT6 810 aa13.25□□□□□ -0.29
NUMB-212ENST00000554546 MKRN1Q9UHC7 482 aaKnown RBP13.25□□□□□ -0.29
NUMB-212ENST00000554546 C21orf2O43822 256 aa13.24□□□□□ -0.29
NUMB-212ENST00000554546 NEK4P51957 841 aa13.24□□□□□ -0.29
NUMB-212ENST00000554546 ARMC3Q5W041 872 aa13.24□□□□□ -0.29
NUMB-212ENST00000554546 KCNV1Q6PIU1 500 aa13.24□□□□□ -0.29
NUMB-212ENST00000554546 FAM210AQ96ND0 272 aa13.24□□□□□ -0.29
NUMB-212ENST00000554546 ELP1O95163 1332 aa13.24□□□□□ -0.29
NUMB-212ENST00000554546 UBE2HP62256 183 aa13.24□□□□□ -0.29
NUMB-212ENST00000554546 TBC1D8BQ0IIM8 1120 aa13.24□□□□□ -0.29
NUMB-212ENST00000554546 CC2D1AQ6P1N0 951 aaPredicted RBP13.24□□□□□ -0.29
NUMB-212ENST00000554546 LRRC31Q6UY01 552 aa13.24□□□□□ -0.29
NUMB-212ENST00000554546 TEX11Q8IYF3 940 aa13.24□□□□□ -0.29
NUMB-212ENST00000554546 TRIM6Q9C030 488 aaPredicted RBP13.24□□□□□ -0.29
NUMB-212ENST00000554546 L2HGDHQ9H9P8 463 aa13.24□□□□□ -0.29
NUMB-212ENST00000554546 PKD2Q13563 968 aa13.24□□□□□ -0.29
NUMB-212ENST00000554546 SNW1Q13573 536 aaKnown RBP13.24□□□□□ -0.29
NUMB-212ENST00000554546 NEDD9Q14511 834 aa13.24□□□□□ -0.29
NUMB-212ENST00000554546 CCDC30Q5VVM6 783 aa13.24□□□□□ -0.29
NUMB-212ENST00000554546 TRIM27P14373 513 aa13.23□□□□□ -0.29
NUMB-212ENST00000554546 CASC1Q6TDU7 716 aa13.23□□□□□ -0.29
NUMB-212ENST00000554546 CCAR2Q8N163 923 aaKnown RBP13.23□□□□□ -0.29
NUMB-212ENST00000554546 GPRASP1Q5JY77 1395 aa13.23□□□□□ -0.29
NUMB-212ENST00000554546 DISP3Q9P2K9 1392 aa13.23□□□□□ -0.29
NUMB-212ENST00000554546 SCRN1Q12765 414 aa13.23□□□□□ -0.29
NUMB-212ENST00000554546 PSMD2Q13200 908 aa13.23□□□□□ -0.29
NUMB-212ENST00000554546 TATDN2Q93075 761 aa13.23□□□□□ -0.29
NUMB-212ENST00000554546 ANKRD33BA6NCL7 494 aa13.22□□□□□ -0.29
NUMB-212ENST00000554546 ERCC3P19447 782 aa13.22□□□□□ -0.29
NUMB-212ENST00000554546 CCNHP51946 323 aaPredicted RBP13.22□□□□□ -0.29
NUMB-212ENST00000554546 ARFGAP3Q9NP61 516 aa13.22□□□□□ -0.29
NUMB-212ENST00000554546 CHMP3Q9Y3E7 222 aa13.22□□□□□ -0.29
NUMB-212ENST00000554546 NF2P35240 595 aa13.22□□□□□ -0.29
NUMB-212ENST00000554546 ERC1Q8IUD2 1116 aa13.22□□□□□ -0.29
NUMB-212ENST00000554546 GNL2Q13823 731 aaKnown RBP13.22□□□□□ -0.29
NUMB-212ENST00000554546 AP1G2O75843 785 aa13.21□□□□□ -0.29
NUMB-212ENST00000554546 ADCY2Q08462 1091 aa13.21□□□□□ -0.29
NUMB-212ENST00000554546 RPS6KA5O75582 802 aa13.21□□□□□ -0.29
NUMB-212ENST00000554546 EIF5P55010 431 aaKnown RBP13.21□□□□□ -0.29
NUMB-212ENST00000554546 PLA2G4DQ86XP0 818 aa13.21□□□□□ -0.29
NUMB-212ENST00000554546 CBX8Q9HC52 389 aa13.21□□□□□ -0.29
NUMB-212ENST00000554546 MYBL2P10244 700 aa13.21□□□□□ -0.3
NUMB-212ENST00000554546 CAMK4Q16566 473 aa13.21□□□□□ -0.3
NUMB-212ENST00000554546 SRCIN1Q9C0H9 1055 aa13.21□□□□□ -0.3
NUMB-212ENST00000554546 CARMIL1Q5VZK9 1371 aa13.21□□□□□ -0.3
NUMB-212ENST00000554546 UHRF1BP1Q6BDS2 1440 aa13.2□□□□□ -0.3
NUMB-212ENST00000554546 FRMD3A2A2Y4 597 aa13.2□□□□□ -0.3
NUMB-212ENST00000554546 EME2A4GXA9 379 aaPredicted RBP13.2□□□□□ -0.3
NUMB-212ENST00000554546 GCFC2P16383 781 aaKnown RBP13.2□□□□□ -0.3
NUMB-212ENST00000554546 RDXP35241 583 aaKnown RBP13.2□□□□□ -0.3
NUMB-212ENST00000554546 CCDC93Q567U6 631 aa13.2□□□□□ -0.3
NUMB-212ENST00000554546 ISM2Q6H9L7 571 aa13.2□□□□□ -0.3
NUMB-212ENST00000554546 TMEM57Q8N5G2 664 aa13.2□□□□□ -0.3
NUMB-212ENST00000554546 CCDC27Q2M243 656 aa13.2□□□□□ -0.3
NUMB-212ENST00000554546 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.2□□□□□ -0.3
NUMB-212ENST00000554546 WDR33Q9C0J8 1336 aaKnown RBP13.2□□□□□ -0.3
NUMB-212ENST00000554546 SHROOM2Q13796 1616 aa13.2□□□□□ -0.3
NUMB-212ENST00000554546 PDE6BP35913 854 aa13.2□□□□□ -0.3
NUMB-212ENST00000554546 ZNF483Q8TF39 744 aaPredicted RBP13.2□□□□□ -0.3
NUMB-212ENST00000554546 ZBTB40Q9NUA8 1239 aa13.2□□□□□ -0.3
NUMB-212ENST00000554546 CCDC69A6NI79 296 aa13.19□□□□□ -0.3
NUMB-212ENST00000554546 GSPT1P15170 499 aaKnown RBP13.19□□□□□ -0.3
NUMB-212ENST00000554546 ATP2B2Q01814 1243 aa13.19□□□□□ -0.3
NUMB-212ENST00000554546 TYRO3Q06418 890 aa13.19□□□□□ -0.3
NUMB-212ENST00000554546 MCM6Q14566 821 aa13.19□□□□□ -0.3
NUMB-212ENST00000554546 STAG1Q8WVM7 1258 aa13.19□□□□□ -0.3
NUMB-212ENST00000554546 FUT8Q9BYC5 575 aa13.19□□□□□ -0.3
NUMB-212ENST00000554546 ANO6Q4KMQ2 910 aa13.19□□□□□ -0.3
NUMB-212ENST00000554546 CCDC26Q8TAB7 109 aa13.19□□□□□ -0.3
NUMB-212ENST00000554546 KCNB2Q92953 911 aa13.19□□□□□ -0.3
NUMB-212ENST00000554546 TACO1Q9BSH4 297 aaKnown RBP13.19□□□□□ -0.3
NUMB-212ENST00000554546 CARD6Q9BX69 1037 aa13.19□□□□□ -0.3
NUMB-212ENST00000554546 PDE11AQ9HCR9 933 aa13.19□□□□□ -0.3
NUMB-212ENST00000554546 EVCP57679 992 aa13.19□□□□□ -0.3
NUMB-212ENST00000554546 CKAP2LQ8IYA6 745 aa13.19□□□□□ -0.3
NUMB-212ENST00000554546 AKAP2Q9Y2D5 859 aa13.19□□□□□ -0.3
NUMB-212ENST00000554546 CCDC158Q5M9N0 1113 aa13.18□□□□□ -0.3
NUMB-212ENST00000554546 HOMER1Q86YM7 354 aa13.18□□□□□ -0.3
NUMB-212ENST00000554546 ERCC4Q92889 916 aaPredicted RBP13.18□□□□□ -0.3
NUMB-212ENST00000554546 SH3GL3Q99963 347 aa13.18□□□□□ -0.3
NUMB-212ENST00000554546 SPATS2LQ9NUQ6 558 aaKnown RBP13.18□□□□□ -0.3
NUMB-212ENST00000554546 FAN1Q9Y2M0 1017 aa13.18□□□□□ -0.3
NUMB-212ENST00000554546 UHRF1BP1LA0JNW5 1464 aa13.18□□□□□ -0.3
NUMB-212ENST00000554546 SKAP2O75563 359 aaPredicted RBP13.18□□□□□ -0.3
NUMB-212ENST00000554546 WDR63Q8IWG1 891 aa13.18□□□□□ -0.3
NUMB-212ENST00000554546 TMEM87AQ8NBN3 555 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms