RNA–Protein interactions for RNA: ENST00000554511.1

PPP4R3A-203, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 3

Gene PPP4R3A, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-203ENST00000554511 VSIG10Q8N0Z9 540 aa23.55■■□□□ 1.36
PPP4R3A-203ENST00000554511 RBM42Q9BTD8 480 aaKnown RBP23.55■■□□□ 1.36
PPP4R3A-203ENST00000554511 TEX13AQ9BXU3 409 aaPredicted RBP23.55■■□□□ 1.36
PPP4R3A-203ENST00000554511 SOS1Q07889 1333 aaPredicted RBP23.55■■□□□ 1.36
PPP4R3A-203ENST00000554511 PTCD1O75127 700 aaKnown RBP23.54■■□□□ 1.36
PPP4R3A-203ENST00000554511 KCNQ3O43525 872 aa23.53■■□□□ 1.36
PPP4R3A-203ENST00000554511 SNRPA1P09661 255 aaKnown RBP23.53■■□□□ 1.36
PPP4R3A-203ENST00000554511 ZNF496Q96IT1 587 aaPredicted RBP23.53■■□□□ 1.36
PPP4R3A-203ENST00000554511 COL24A1Q17RW2 1714 aa23.53■■□□□ 1.36
PPP4R3A-203ENST00000554511 DUSP27Q5VZP5 1158 aa23.52■■□□□ 1.36
PPP4R3A-203ENST00000554511 LOC102724428A0A0B4J2F2 783 aa23.51■■□□□ 1.35
PPP4R3A-203ENST00000554511 HOXB7P09629 217 aa23.51■■□□□ 1.35
PPP4R3A-203ENST00000554511 SIK1P57059 783 aa23.51■■□□□ 1.35
PPP4R3A-203ENST00000554511 GPR162Q16538 588 aa23.51■■□□□ 1.35
PPP4R3A-203ENST00000554511 CT47B1P0C2W7 299 aaPredicted RBP23.5■■□□□ 1.35
PPP4R3A-203ENST00000554511 EXOSC9Q06265 439 aaKnown RBP23.5■■□□□ 1.35
PPP4R3A-203ENST00000554511 C5P01031 1676 aa23.5■■□□□ 1.35
PPP4R3A-203ENST00000554511 HEG1Q9ULI3 1381 aa23.5■■□□□ 1.35
PPP4R3A-203ENST00000554511 GIGYF1O75420 1035 aaPredicted RBP23.49■■□□□ 1.35
PPP4R3A-203ENST00000554511 ATP6V1AP38606 617 aa23.49■■□□□ 1.35
PPP4R3A-203ENST00000554511 KDM3BQ7LBC6 1761 aa23.49■■□□□ 1.35
PPP4R3A-203ENST00000554511 TWISTNBQ3B726 338 aaPredicted RBP23.48■■□□□ 1.35
PPP4R3A-203ENST00000554511 MSL1Q68DK7 614 aa23.48■■□□□ 1.35
PPP4R3A-203ENST00000554511 FLAD1Q8NFF5 587 aa23.48■■□□□ 1.35
PPP4R3A-203ENST00000554511 STARD3NLO95772 234 aa23.47■■□□□ 1.35
PPP4R3A-203ENST00000554511 C8orf58Q8NAV2 365 aa23.47■■□□□ 1.35
PPP4R3A-203ENST00000554511 ZNF784Q8NCA9 323 aaPredicted RBP23.47■■□□□ 1.35
PPP4R3A-203ENST00000554511 NLGN2Q8NFZ4 835 aa23.47■■□□□ 1.35
PPP4R3A-203ENST00000554511 ZNF428Q96B54 188 aa23.47■■□□□ 1.35
PPP4R3A-203ENST00000554511 PELP1Q8IZL8 1130 aaKnown RBP23.46■■□□□ 1.35
PPP4R3A-203ENST00000554511 AK7Q96M32 723 aa23.46■■□□□ 1.35
PPP4R3A-203ENST00000554511 ELL2O00472 640 aaPredicted RBP23.45■■□□□ 1.34
PPP4R3A-203ENST00000554511 TAF1LQ8IZX4 1826 aa23.45■■□□□ 1.34
PPP4R3A-203ENST00000554511 KCPQ6ZWJ8 1503 aa23.44■■□□□ 1.34
PPP4R3A-203ENST00000554511 C4BP0C0L5 1744 aa23.43■■□□□ 1.34
PPP4R3A-203ENST00000554511 VAMP4O75379 141 aa23.43■■□□□ 1.34
PPP4R3A-203ENST00000554511 CCDC30Q5VVM6 783 aa23.43■■□□□ 1.34
PPP4R3A-203ENST00000554511 UBR2Q8IWV8 1755 aa23.42■■□□□ 1.34
PPP4R3A-203ENST00000554511 EIF2S2P20042 333 aaKnown RBP23.42■■□□□ 1.34
PPP4R3A-203ENST00000554511 KRT24Q2M2I5 525 aa23.42■■□□□ 1.34
PPP4R3A-203ENST00000554511 AMIGO3Q86WK7 504 aa23.42■■□□□ 1.34
PPP4R3A-203ENST00000554511 DNAJC10Q8IXB1 793 aa23.42■■□□□ 1.34
PPP4R3A-203ENST00000554511 TSPYL6Q8N831 410 aa23.42■■□□□ 1.34
PPP4R3A-203ENST00000554511 CHD4Q14839 1912 aa23.41■■□□□ 1.34
PPP4R3A-203ENST00000554511 GOLGB1Q14789 3259 aaKnown RBP23.41■■□□□ 1.34
PPP4R3A-203ENST00000554511 PHF14O94880 888 aa23.41■■□□□ 1.34
PPP4R3A-203ENST00000554511 HDGFL1Q5TGJ6 251 aa23.41■■□□□ 1.34
PPP4R3A-203ENST00000554511 LINC00116Q8NCU8 138 aa23.41■■□□□ 1.34
PPP4R3A-203ENST00000554511 SMIM5Q71RC9 77 aa23.4■■□□□ 1.34
PPP4R3A-203ENST00000554511 SLC4A9Q96Q91 983 aa23.4■■□□□ 1.34
PPP4R3A-203ENST00000554511 STK31Q9BXU1 1019 aa23.4■■□□□ 1.34
PPP4R3A-203ENST00000554511 USP16Q9Y5T5 823 aa23.4■■□□□ 1.34
PPP4R3A-203ENST00000554511 ERBB4Q15303 1308 aa23.39■■□□□ 1.34
PPP4R3A-203ENST00000554511 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.39■■□□□ 1.33
PPP4R3A-203ENST00000554511 ZNF831Q5JPB2 1677 aa23.38■■□□□ 1.33
PPP4R3A-203ENST00000554511 CYP19A1P11511 503 aaPredicted RBP23.38■■□□□ 1.33
PPP4R3A-203ENST00000554511 ITPK1Q13572 414 aa23.38■■□□□ 1.33
PPP4R3A-203ENST00000554511 NPM2Q86SE8 214 aaKnown RBP23.38■■□□□ 1.33
PPP4R3A-203ENST00000554511 PRAMEF22A3QJZ6 481 aa23.37■■□□□ 1.33
PPP4R3A-203ENST00000554511 CENPBP07199 599 aaPredicted RBP23.37■■□□□ 1.33
PPP4R3A-203ENST00000554511 ALDH1L2Q3SY69 923 aa23.37■■□□□ 1.33
PPP4R3A-203ENST00000554511 RC3H1Q5TC82 1133 aaKnown RBP23.37■■□□□ 1.33
PPP4R3A-203ENST00000554511 DBF4Q9UBU7 674 aaPredicted RBP23.37■■□□□ 1.33
PPP4R3A-203ENST00000554511 SSFA2P28290 1259 aa23.36■■□□□ 1.33
PPP4R3A-203ENST00000554511 CD2APQ9Y5K6 639 aa23.36■■□□□ 1.33
PPP4R3A-203ENST00000554511 UBR3Q6ZT12 1888 aa23.35■■□□□ 1.33
PPP4R3A-203ENST00000554511 YBX3P16989 372 aaKnown RBP eCLIP23.35■■□□□ 1.33
PPP4R3A-203ENST00000554511 CCDC87Q9NVE4 849 aa23.35■■□□□ 1.33
PPP4R3A-203ENST00000554511 GNPATO15228 680 aa23.34■■□□□ 1.33
PPP4R3A-203ENST00000554511 NECTIN2Q92692 538 aa23.34■■□□□ 1.33
PPP4R3A-203ENST00000554511 DDX21Q9NR30 783 aaKnown RBP eCLIP23.34■■□□□ 1.33
PPP4R3A-203ENST00000554511 CNTNAP4Q9C0A0 1308 aa23.33■■□□□ 1.33
PPP4R3A-203ENST00000554511 GRIN3BO60391 1043 aa23.33■■□□□ 1.33
PPP4R3A-203ENST00000554511 CRKLP46109 303 aaKnown RBP23.33■■□□□ 1.33
PPP4R3A-203ENST00000554511 HYPKQ9NX55 129 aa23.33■■□□□ 1.33
PPP4R3A-203ENST00000554511 A1BGP04217 495 aa23.32■■□□□ 1.32
PPP4R3A-203ENST00000554511 CICQ96RK0 1608 aaPredicted RBP23.32■■□□□ 1.32
PPP4R3A-203ENST00000554511 SLC4A2P04920 1241 aa23.31■■□□□ 1.32
PPP4R3A-203ENST00000554511 CANXP27824 592 aaKnown RBP23.31■■□□□ 1.32
PPP4R3A-203ENST00000554511 RARSP54136 660 aaKnown RBP23.31■■□□□ 1.32
PPP4R3A-203ENST00000554511 RCAN3Q9UKA8 241 aa23.31■■□□□ 1.32
PPP4R3A-203ENST00000554511 IL6STP40189 918 aaPredicted RBP23.3■■□□□ 1.32
PPP4R3A-203ENST00000554511 INTS5Q6P9B9 1019 aaKnown RBP23.3■■□□□ 1.32
PPP4R3A-203ENST00000554511 SMC4Q9NTJ3 1288 aa23.3■■□□□ 1.32
PPP4R3A-203ENST00000554511 CHPF2Q9P2E5 772 aa23.3■■□□□ 1.32
PPP4R3A-203ENST00000554511 RTCBQ9Y3I0 505 aaKnown RBP23.3■■□□□ 1.32
PPP4R3A-203ENST00000554511 A0A087WZG4 1122 aa23.29■■□□□ 1.32
PPP4R3A-203ENST00000554511 RPS6KA4O75676 772 aa23.29■■□□□ 1.32
PPP4R3A-203ENST00000554511 SSH1Q8WYL5 1049 aa23.29■■□□□ 1.32
PPP4R3A-203ENST00000554511 TJP1Q07157 1748 aa23.28■■□□□ 1.32
PPP4R3A-203ENST00000554511 LAMB4A4D0S4 1761 aa23.28■■□□□ 1.32
PPP4R3A-203ENST00000554511 MYL6BP14649 208 aa23.28■■□□□ 1.32
PPP4R3A-203ENST00000554511 TCERG1O14776 1098 aaKnown RBP23.27■■□□□ 1.32
PPP4R3A-203ENST00000554511 ZBTB1Q9Y2K1 713 aa23.27■■□□□ 1.32
PPP4R3A-203ENST00000554511 NBPF26B4DH59 902 aa23.26■■□□□ 1.31
PPP4R3A-203ENST00000554511 ADRA2BP18089 450 aa23.26■■□□□ 1.31
PPP4R3A-203ENST00000554511 BRPF1P55201 1214 aaPredicted RBP23.26■■□□□ 1.31
PPP4R3A-203ENST00000554511 PDIA6Q15084 440 aa23.26■■□□□ 1.31
PPP4R3A-203ENST00000554511 TRAPPC3LQ5T215 181 aa23.26■■□□□ 1.31
PPP4R3A-203ENST00000554511 NBPF10Q6P3W6 841 aaKnown RBP23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms