RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 AVPP01185 164 aa8.31□□□□□ -1.08
MTHFD1-206ENST00000554353 IGFBP4P22692 258 aa8.31□□□□□ -1.08
MTHFD1-206ENST00000554353 FKBP5Q13451 457 aaPredicted RBP8.31□□□□□ -1.08
MTHFD1-206ENST00000554353 TXNDC2Q86VQ3 553 aa8.31□□□□□ -1.08
MTHFD1-206ENST00000554353 C1orf216Q8TAB5 229 aa8.31□□□□□ -1.08
MTHFD1-206ENST00000554353 VTI1AQ96AJ9 217 aa8.31□□□□□ -1.08
MTHFD1-206ENST00000554353 INSM2Q96T92 566 aaPredicted RBP8.31□□□□□ -1.08
MTHFD1-206ENST00000554353 GNEQ9Y223 722 aaKnown RBP8.31□□□□□ -1.08
MTHFD1-206ENST00000554353 FANCD2Q9BXW9 1451 aa8.31□□□□□ -1.08
MTHFD1-206ENST00000554353 CDK2AP1O14519 115 aa8.3□□□□□ -1.08
MTHFD1-206ENST00000554353 C21orf2O43822 256 aa8.3□□□□□ -1.08
MTHFD1-206ENST00000554353 FOXK2Q01167 660 aa8.3□□□□□ -1.08
MTHFD1-206ENST00000554353 C6orf118Q5T5N4 469 aa8.3□□□□□ -1.08
MTHFD1-206ENST00000554353 TAS1R3Q7RTX0 852 aa8.3□□□□□ -1.08
MTHFD1-206ENST00000554353 LINC00528Q8N1L1 170 aa8.3□□□□□ -1.08
MTHFD1-206ENST00000554353 POLMQ9NP87 494 aaPredicted RBP8.3□□□□□ -1.08
MTHFD1-206ENST00000554353 MTMR7Q9Y216 660 aa8.3□□□□□ -1.08
MTHFD1-206ENST00000554353 HRH3Q9Y5N1 445 aa8.3□□□□□ -1.08
MTHFD1-206ENST00000554353 USP3Q9Y6I4 520 aa8.3□□□□□ -1.08
MTHFD1-206ENST00000554353 TOP2AP11388 1531 aaKnown RBP8.29□□□□□ -1.08
MTHFD1-206ENST00000554353 ABL1P00519 1130 aa8.29□□□□□ -1.08
MTHFD1-206ENST00000554353 BMP2P12643 396 aa8.29□□□□□ -1.08
MTHFD1-206ENST00000554353 GTF2E1P29083 439 aaPredicted RBP8.29□□□□□ -1.08
MTHFD1-206ENST00000554353 SERPINB4P48594 390 aa8.29□□□□□ -1.08
MTHFD1-206ENST00000554353 MTFR1Q15390 333 aa8.29□□□□□ -1.08
MTHFD1-206ENST00000554353 SLC27A3Q5K4L6 730 aa8.29□□□□□ -1.08
MTHFD1-206ENST00000554353 CAPN12Q6ZSI9 719 aa8.29□□□□□ -1.08
MTHFD1-206ENST00000554353 ZSCAN10Q96SZ4 725 aaPredicted RBP8.29□□□□□ -1.08
MTHFD1-206ENST00000554353 AAASQ9NRG9 546 aa8.29□□□□□ -1.08
MTHFD1-206ENST00000554353 CABP1Q9NZU7 370 aa8.29□□□□□ -1.08
MTHFD1-206ENST00000554353 SEPT3Q9UH03 358 aa8.29□□□□□ -1.08
MTHFD1-206ENST00000554353 CFTRP13569 1480 aa8.29□□□□□ -1.08
MTHFD1-206ENST00000554353 FOXO3O43524 673 aa8.28□□□□□ -1.08
MTHFD1-206ENST00000554353 NAA30Q147X3 362 aaPredicted RBP8.28□□□□□ -1.08
MTHFD1-206ENST00000554353 TMCO4Q5TGY1 634 aa8.28□□□□□ -1.08
MTHFD1-206ENST00000554353 TMEM214Q6NUQ4 689 aaKnown RBP8.28□□□□□ -1.08
MTHFD1-206ENST00000554353 CRIPAKQ8N1N5 446 aa8.28□□□□□ -1.08
MTHFD1-206ENST00000554353 FHDC1Q9C0D6 1143 aaPredicted RBP8.28□□□□□ -1.08
MTHFD1-206ENST00000554353 DACH1Q9UI36 760 aa8.28□□□□□ -1.08
MTHFD1-206ENST00000554353 CHMP3Q9Y3E7 222 aa8.28□□□□□ -1.08
MTHFD1-206ENST00000554353 PRDM2Q13029 1718 aa8.27□□□□□ -1.09
MTHFD1-206ENST00000554353 SPINT1O43278 529 aa8.27□□□□□ -1.09
MTHFD1-206ENST00000554353 PTCD1O75127 700 aaKnown RBP8.27□□□□□ -1.09
MTHFD1-206ENST00000554353 CTSOP43234 321 aaPredicted RBP8.27□□□□□ -1.09
MTHFD1-206ENST00000554353 PSMA6P60900 246 aaKnown RBP8.27□□□□□ -1.09
MTHFD1-206ENST00000554353 MRPL14Q6P1L8 145 aaKnown RBP8.27□□□□□ -1.09
MTHFD1-206ENST00000554353 NBPF15Q8N660 670 aa8.27□□□□□ -1.09
MTHFD1-206ENST00000554353 ZNF232Q9UNY5 417 aa8.27□□□□□ -1.09
MTHFD1-206ENST00000554353 IQSEC3Q9UPP2 1182 aaPredicted RBP8.27□□□□□ -1.09
MTHFD1-206ENST00000554353 BMP1P13497 986 aa8.26□□□□□ -1.09
MTHFD1-206ENST00000554353 ZNF211Q13398 564 aaPredicted RBP8.26□□□□□ -1.09
MTHFD1-206ENST00000554353 GTF3C2Q8WUA4 911 aaPredicted RBP8.26□□□□□ -1.09
MTHFD1-206ENST00000554353 ANO2Q9NQ90 1003 aa8.26□□□□□ -1.09
MTHFD1-206ENST00000554353 PARP3Q9Y6F1 533 aa8.26□□□□□ -1.09
MTHFD1-206ENST00000554353 SERTM1A2A2V5 107 aa8.25□□□□□ -1.09
MTHFD1-206ENST00000554353 GPC1P35052 558 aa8.25□□□□□ -1.09
MTHFD1-206ENST00000554353 SMCPP49901 116 aaPredicted RBP8.25□□□□□ -1.09
MTHFD1-206ENST00000554353 RNF144AP50876 292 aaPredicted RBP8.25□□□□□ -1.09
MTHFD1-206ENST00000554353 GNASQ5JWF2 1037 aa8.25□□□□□ -1.09
MTHFD1-206ENST00000554353 PPARGC1BQ86YN6 1023 aaKnown RBP8.25□□□□□ -1.09
MTHFD1-206ENST00000554353 NGLY1Q96IV0 654 aa8.25□□□□□ -1.09
MTHFD1-206ENST00000554353 C2orf49Q9BVC5 232 aaPredicted RBP8.25□□□□□ -1.09
MTHFD1-206ENST00000554353 NIFKQ9BYG3 293 aaKnown RBP8.25□□□□□ -1.09
MTHFD1-206ENST00000554353 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.25□□□□□ -1.09
MTHFD1-206ENST00000554353 CCDC9Q9Y3X0 531 aaKnown RBP8.25□□□□□ -1.09
MTHFD1-206ENST00000554353 URB2Q14146 1524 aaKnown RBP8.24□□□□□ -1.09
MTHFD1-206ENST00000554353 SCARF1Q14162 830 aa8.24□□□□□ -1.09
MTHFD1-206ENST00000554353 SH3PXD2AQ5TCZ1 1133 aa8.24□□□□□ -1.09
MTHFD1-206ENST00000554353 FOXD4L5Q5VV16 416 aaPredicted RBP8.24□□□□□ -1.09
MTHFD1-206ENST00000554353 RHBDD1Q8TEB9 315 aa8.24□□□□□ -1.09
MTHFD1-206ENST00000554353 GRIP2Q9C0E4 1043 aa8.24□□□□□ -1.09
MTHFD1-206ENST00000554353 SOWAHDA6NJG2 315 aa8.23□□□□□ -1.09
MTHFD1-206ENST00000554353 AXIN1O15169 862 aa8.23□□□□□ -1.09
MTHFD1-206ENST00000554353 NOS2P35228 1153 aa8.23□□□□□ -1.09
MTHFD1-206ENST00000554353 PLA2G4AP47712 749 aa8.23□□□□□ -1.09
MTHFD1-206ENST00000554353 MTMR3Q13615 1198 aa8.23□□□□□ -1.09
MTHFD1-206ENST00000554353 TEAD4Q15561 434 aa8.23□□□□□ -1.09
MTHFD1-206ENST00000554353 SND1Q7KZF4 910 aaKnown RBP eCLIP8.23□□□□□ -1.09
MTHFD1-206ENST00000554353 PRICKLE2Q7Z3G6 844 aa8.23□□□□□ -1.09
MTHFD1-206ENST00000554353 STAG2Q8N3U4 1231 aa8.23□□□□□ -1.09
MTHFD1-206ENST00000554353 ZDHHC1Q8WTX9 485 aa8.23□□□□□ -1.09
MTHFD1-206ENST00000554353 L3MBTL2Q969R5 705 aa8.23□□□□□ -1.09
MTHFD1-206ENST00000554353 COL26A1Q96A83 441 aa8.23□□□□□ -1.09
MTHFD1-206ENST00000554353 BIN2Q9UBW5 565 aaPredicted RBP8.23□□□□□ -1.09
MTHFD1-206ENST00000554353 HCN4Q9Y3Q4 1203 aa8.23□□□□□ -1.09
MTHFD1-206ENST00000554353 DNMT3AQ9Y6K1 912 aaPredicted RBP8.23□□□□□ -1.09
MTHFD1-206ENST00000554353 CCDC88BA6NC98 1476 aa8.22□□□□□ -1.09
MTHFD1-206ENST00000554353 FIGNL2A6NMB9 653 aa8.22□□□□□ -1.09
MTHFD1-206ENST00000554353 H3BRB1 525 aa8.22□□□□□ -1.09
MTHFD1-206ENST00000554353 EML1O00423 815 aa8.22□□□□□ -1.09
MTHFD1-206ENST00000554353 PHKA2P46019 1235 aa8.22□□□□□ -1.09
MTHFD1-206ENST00000554353 INSM1Q01101 510 aaPredicted RBP8.22□□□□□ -1.09
MTHFD1-206ENST00000554353 SUZ12Q15022 739 aaKnown RBP8.22□□□□□ -1.09
MTHFD1-206ENST00000554353 CTC1Q2NKJ3 1217 aa8.22□□□□□ -1.09
MTHFD1-206ENST00000554353 TRIM46Q7Z4K8 759 aa8.22□□□□□ -1.09
MTHFD1-206ENST00000554353 AIDAQ96BJ3 306 aa8.22□□□□□ -1.09
MTHFD1-206ENST00000554353 TUT1Q9H6E5 874 aaKnown RBP8.22□□□□□ -1.09
MTHFD1-206ENST00000554353 TTLL8A6PVC2 850 aa8.21□□□□□ -1.1
MTHFD1-206ENST00000554353 WIPF1O43516 503 aa8.21□□□□□ -1.1
MTHFD1-206ENST00000554353 MFAP1P55081 439 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms