RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 TM4SF1P30408 202 aa23.63■■□□□ 1.37
NEK9-204ENST00000554258 DDNO94850 711 aaPredicted RBP23.62■■□□□ 1.37
NEK9-204ENST00000554258 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.62■■□□□ 1.372e-6■■■□□ 14.7
NEK9-204ENST00000554258 WDR33Q9C0J8 1336 aaKnown RBP23.61■■□□□ 1.37
NEK9-204ENST00000554258 SCN4AP35499 1836 aa23.61■■□□□ 1.37
NEK9-204ENST00000554258 GGNBP2Q9H3C7 697 aa23.61■■□□□ 1.37
NEK9-204ENST00000554258 NCAPD2Q15021 1401 aa23.6■■□□□ 1.37
NEK9-204ENST00000554258 FER1L6Q2WGJ9 1857 aa23.6■■□□□ 1.37
NEK9-204ENST00000554258 IQCA1LA6NCM1 817 aa23.6■■□□□ 1.37
NEK9-204ENST00000554258 ITGBL1O95965 494 aaPredicted RBP23.6■■□□□ 1.37
NEK9-204ENST00000554258 CRKLP46109 303 aaKnown RBP23.6■■□□□ 1.37
NEK9-204ENST00000554258 PUS7Q96PZ0 661 aaKnown RBP23.6■■□□□ 1.37
NEK9-204ENST00000554258 BEGAINQ9BUH8 593 aa23.6■■□□□ 1.37
NEK9-204ENST00000554258 KIF24Q5T7B8 1368 aa23.6■■□□□ 1.37
NEK9-204ENST00000554258 C2CD5Q86YS7 1000 aa23.59■■□□□ 1.37
NEK9-204ENST00000554258 NRXN2Q9P2S2 1712 aa23.57■■□□□ 1.36
NEK9-204ENST00000554258 FYB1O15117 783 aa23.57■■□□□ 1.36
NEK9-204ENST00000554258 ZPR1O75312 459 aa23.57■■□□□ 1.36
NEK9-204ENST00000554258 H0YIN7 160 aa23.56■■□□□ 1.36
NEK9-204ENST00000554258 TAF1DQ9H5J8 278 aaPredicted RBP23.56■■□□□ 1.36
NEK9-204ENST00000554258 ABT1Q9ULW3 272 aaKnown RBP23.56■■□□□ 1.36
NEK9-204ENST00000554258 TONSLQ96HA7 1378 aa23.55■■□□□ 1.36
NEK9-204ENST00000554258 ERVV-2B6SEH9 535 aa23.55■■□□□ 1.36
NEK9-204ENST00000554258 EAPPQ56P03 285 aaPredicted RBP23.55■■□□□ 1.36
NEK9-204ENST00000554258 USPL1Q5W0Q7 1092 aa23.55■■□□□ 1.36
NEK9-204ENST00000554258 CASP8AP2Q9UKL3 1982 aa23.54■■□□□ 1.36
NEK9-204ENST00000554258 ADAMTS7Q9UKP4 1686 aa23.54■■□□□ 1.36
NEK9-204ENST00000554258 PTCD1O75127 700 aaKnown RBP23.54■■□□□ 1.36
NEK9-204ENST00000554258 CCER1Q8TC90 406 aaPredicted RBP23.54■■□□□ 1.36
NEK9-204ENST00000554258 SIN3AQ96ST3 1273 aa23.54■■□□□ 1.36
NEK9-204ENST00000554258 MCOLN1Q9GZU1 580 aa23.54■■□□□ 1.36
NEK9-204ENST00000554258 ZNF219Q9P2Y4 722 aaPredicted RBP23.54■■□□□ 1.36
NEK9-204ENST00000554258 CLEC11AQ9Y240 323 aa23.54■■□□□ 1.36
NEK9-204ENST00000554258 THSD7BQ9C0I4 1608 aa23.53■■□□□ 1.36
NEK9-204ENST00000554258 CARD11Q9BXL7 1154 aa23.53■■□□□ 1.36
NEK9-204ENST00000554258 KIF20BQ96Q89 1820 aa23.52■■□□□ 1.36
NEK9-204ENST00000554258 C21orf2O43822 256 aa23.52■■□□□ 1.36
NEK9-204ENST00000554258 NFIXQ14938 502 aa23.52■■□□□ 1.36
NEK9-204ENST00000554258 TAOK3Q9H2K8 898 aa23.51■■□□□ 1.35
NEK9-204ENST00000554258 TSKSQ9UJT2 592 aa23.51■■□□□ 1.35
NEK9-204ENST00000554258 TJP1Q07157 1748 aa23.5■■□□□ 1.35
NEK9-204ENST00000554258 SERPINB2P05120 415 aa23.5■■□□□ 1.35
NEK9-204ENST00000554258 PAXIP1Q6ZW49 1069 aaPredicted RBP23.5■■□□□ 1.35
NEK9-204ENST00000554258 L3MBTL3Q96JM7 780 aaPredicted RBP23.5■■□□□ 1.35
NEK9-204ENST00000554258 EMILIN1Q9Y6C2 1016 aa23.5■■□□□ 1.35
NEK9-204ENST00000554258 ZNF622Q969S3 477 aaKnown RBP eCLIP23.49■■□□□ 1.35
NEK9-204ENST00000554258 EYA1Q99502 592 aa23.49■■□□□ 1.35
NEK9-204ENST00000554258 LTBP3Q9NS15 1303 aa23.49■■□□□ 1.35
NEK9-204ENST00000554258 ADAMTSL1Q8N6G6 1762 aa23.48■■□□□ 1.35
NEK9-204ENST00000554258 PPM1GO15355 546 aaPredicted RBP23.48■■□□□ 1.35
NEK9-204ENST00000554258 CABP4P57796 275 aa23.48■■□□□ 1.35
NEK9-204ENST00000554258 GRM1Q13255 1194 aa23.48■■□□□ 1.35
NEK9-204ENST00000554258 CNTROBQ8N137 903 aa23.48■■□□□ 1.35
NEK9-204ENST00000554258 CAPNS2Q96L46 248 aa23.48■■□□□ 1.35
NEK9-204ENST00000554258 CARMIL3Q8ND23 1372 aa23.48■■□□□ 1.35
NEK9-204ENST00000554258 ECE1P42892 770 aa23.47■■□□□ 1.35
NEK9-204ENST00000554258 INTS5Q6P9B9 1019 aaKnown RBP23.47■■□□□ 1.35
NEK9-204ENST00000554258 HSP90AB1P08238 724 aaKnown RBP23.46■■□□□ 1.35
NEK9-204ENST00000554258 CACNA1SQ13698 1873 aa23.46■■□□□ 1.35
NEK9-204ENST00000554258 PRPF38BQ5VTL8 546 aaKnown RBP23.46■■□□□ 1.35
NEK9-204ENST00000554258 MAP1SQ66K74 1059 aaPredicted RBP23.46■■□□□ 1.35
NEK9-204ENST00000554258 GPR101Q96P66 508 aaPredicted RBP23.46■■□□□ 1.35
NEK9-204ENST00000554258 LTBP1Q14766 1721 aa23.45■■□□□ 1.34
NEK9-204ENST00000554258 HACL1Q9UJ83 578 aa23.45■■□□□ 1.34
NEK9-204ENST00000554258 ANKRD31Q8N7Z5 1873 aa23.45■■□□□ 1.34
NEK9-204ENST00000554258 DGKZQ13574 1117 aa23.44■■□□□ 1.34
NEK9-204ENST00000554258 COL11A2P13942 1736 aaPredicted RBP23.43■■□□□ 1.34
NEK9-204ENST00000554258 ANKRD26Q9UPS8 1709 aa23.43■■□□□ 1.34
NEK9-204ENST00000554258 EPHX2P34913 555 aa23.43■■□□□ 1.34
NEK9-204ENST00000554258 NEUROD1Q13562 356 aa23.43■■□□□ 1.34
NEK9-204ENST00000554258 NARFQ9UHQ1 456 aa23.43■■□□□ 1.34
NEK9-204ENST00000554258 SOS1Q07889 1333 aaPredicted RBP23.42■■□□□ 1.34
NEK9-204ENST00000554258 CYP4F22Q6NT55 531 aa23.42■■□□□ 1.34
NEK9-204ENST00000554258 PNMA8AQ86V59 439 aaPredicted RBP23.42■■□□□ 1.34
NEK9-204ENST00000554258 PDZRN3Q9UPQ7 1066 aa23.41■■□□□ 1.34
NEK9-204ENST00000554258 SLX4Q8IY92 1834 aa23.4■■□□□ 1.34
NEK9-204ENST00000554258 DDX21Q9NR30 783 aaKnown RBP eCLIP23.4■■□□□ 1.34
NEK9-204ENST00000554258 WASHC2AQ641Q2 1341 aa23.39■■□□□ 1.34
NEK9-204ENST00000554258 CA12O43570 354 aa23.39■■□□□ 1.33
NEK9-204ENST00000554258 PDE6BP35913 854 aa23.39■■□□□ 1.33
NEK9-204ENST00000554258 TIMELESSQ9UNS1 1208 aa23.39■■□□□ 1.33
NEK9-204ENST00000554258 COL15A1P39059 1388 aa23.39■■□□□ 1.33
NEK9-204ENST00000554258 TRPM7Q96QT4 1865 aa23.39■■□□□ 1.33
NEK9-204ENST00000554258 BCL2L12Q9HB09 334 aa23.38■■□□□ 1.33
NEK9-204ENST00000554258 SOX10P56693 466 aa23.37■■□□□ 1.33
NEK9-204ENST00000554258 SOGA3Q5TF21 947 aa23.37■■□□□ 1.33
NEK9-204ENST00000554258 ZNF541Q9H0D2 1346 aa23.36■■□□□ 1.33
NEK9-204ENST00000554258 MAP2K2P36507 400 aa23.36■■□□□ 1.33
NEK9-204ENST00000554258 BICDL1Q6ZP65 573 aa23.36■■□□□ 1.33
NEK9-204ENST00000554258 DNAJC10Q8IXB1 793 aa23.36■■□□□ 1.33
NEK9-204ENST00000554258 NFATC2IPQ8NCF5 419 aa23.36■■□□□ 1.33
NEK9-204ENST00000554258 BRIP1Q9BX63 1249 aa23.36■■□□□ 1.33
NEK9-204ENST00000554258 RNF123Q5XPI4 1314 aa23.35■■□□□ 1.33
NEK9-204ENST00000554258 AOC2O75106 756 aa23.35■■□□□ 1.33
NEK9-204ENST00000554258 ZNF530Q6P9A1 599 aaPredicted RBP23.35■■□□□ 1.33
NEK9-204ENST00000554258 TESK2Q96S53 571 aa23.35■■□□□ 1.33
NEK9-204ENST00000554258 ARFGEF2Q9Y6D5 1785 aa23.35■■□□□ 1.33
NEK9-204ENST00000554258 ST20-MTHFSA0A0A6YYL1 179 aa23.34■■□□□ 1.33
NEK9-204ENST00000554258 MTHFSP49914 203 aa23.34■■□□□ 1.33
NEK9-204ENST00000554258 CNKSR1Q969H4 720 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms