RNA–Protein interactions for RNA: ENST00000554035.5

RDH11-206, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-206ENST00000554035 TMEM57Q8N5G2 664 aa11.35□□□□□ -0.59
RDH11-206ENST00000554035 UBR2Q8IWV8 1755 aa11.34□□□□□ -0.59
RDH11-206ENST00000554035 GLI3P10071 1580 aa11.34□□□□□ -0.59
RDH11-206ENST00000554035 DDB1Q16531 1140 aa11.34□□□□□ -0.59
RDH11-206ENST00000554035 INTS3Q68E01 1043 aaKnown RBP11.34□□□□□ -0.59
RDH11-206ENST00000554035 TTC5Q8N0Z6 440 aa11.34□□□□□ -0.59
RDH11-206ENST00000554035 FMNL2Q96PY5 1086 aa11.34□□□□□ -0.59
RDH11-206ENST00000554035 USP21Q9UK80 565 aa11.34□□□□□ -0.59
RDH11-206ENST00000554035 SNRPA1P09661 255 aaKnown RBP11.33□□□□□ -0.6
RDH11-206ENST00000554035 SLC39A6Q13433 755 aa11.33□□□□□ -0.6
RDH11-206ENST00000554035 MEX3CQ5U5Q3 659 aaKnown RBP11.33□□□□□ -0.6
RDH11-206ENST00000554035 ZNF496Q96IT1 587 aaPredicted RBP11.33□□□□□ -0.6
RDH11-206ENST00000554035 TMOD3Q9NYL9 352 aa11.33□□□□□ -0.6
RDH11-206ENST00000554035 DBF4Q9UBU7 674 aaPredicted RBP11.33□□□□□ -0.6
RDH11-206ENST00000554035 CCDC9Q9Y3X0 531 aaKnown RBP11.33□□□□□ -0.6
RDH11-206ENST00000554035 KCPQ6ZWJ8 1503 aa11.33□□□□□ -0.6
RDH11-206ENST00000554035 ATRNO75882 1429 aa11.33□□□□□ -0.6
RDH11-206ENST00000554035 PXDNLA1KZ92 1463 aa11.32□□□□□ -0.6
RDH11-206ENST00000554035 IGHDP01880 384 aa11.32□□□□□ -0.6
RDH11-206ENST00000554035 FLIIQ13045 1269 aa11.32□□□□□ -0.6
RDH11-206ENST00000554035 HDAC1Q13547 482 aaPredicted RBP11.32□□□□□ -0.6
RDH11-206ENST00000554035 G2E3Q7L622 706 aa11.32□□□□□ -0.6
RDH11-206ENST00000554035 ITPRIPQ8IWB1 547 aa11.32□□□□□ -0.6
RDH11-206ENST00000554035 RWDD1Q9H446 243 aaPredicted RBP11.32□□□□□ -0.6
RDH11-206ENST00000554035 ZBTB40Q9NUA8 1239 aa11.32□□□□□ -0.6
RDH11-206ENST00000554035 C5P01031 1676 aa11.32□□□□□ -0.6
RDH11-206ENST00000554035 THSD7AQ9UPZ6 1657 aa11.32□□□□□ -0.6
RDH11-206ENST00000554035 BCL9O00512 1426 aa11.32□□□□□ -0.6
RDH11-206ENST00000554035 LAMB4A4D0S4 1761 aa11.31□□□□□ -0.6
RDH11-206ENST00000554035 ITGB4P16144 1822 aa11.31□□□□□ -0.6
RDH11-206ENST00000554035 ZBTB7BO15156 539 aaPredicted RBP11.31□□□□□ -0.6
RDH11-206ENST00000554035 EIF2S2P20042 333 aaKnown RBP11.31□□□□□ -0.6
RDH11-206ENST00000554035 DDX21Q9NR30 783 aaKnown RBP eCLIP11.31□□□□□ -0.6
RDH11-206ENST00000554035 HYPKQ9NX55 129 aa11.31□□□□□ -0.6
RDH11-206ENST00000554035 CHPF2Q9P2E5 772 aa11.31□□□□□ -0.6
RDH11-206ENST00000554035 PCDHB15Q9Y5E8 787 aa11.31□□□□□ -0.6
RDH11-206ENST00000554035 AFF2P51816 1311 aa11.31□□□□□ -0.6
RDH11-206ENST00000554035 ERBB4Q15303 1308 aa11.31□□□□□ -0.6
RDH11-206ENST00000554035 N4BP2Q86UW6 1770 aaPredicted RBP11.31□□□□□ -0.6
RDH11-206ENST00000554035 CCT4P50991 539 aaKnown RBP11.3□□□□□ -0.6
RDH11-206ENST00000554035 VSIG10Q8N0Z9 540 aa11.3□□□□□ -0.6
RDH11-206ENST00000554035 MARCH10Q8NA82 808 aaPredicted RBP11.3□□□□□ -0.6
RDH11-206ENST00000554035 PIGBQ92521 554 aa11.3□□□□□ -0.6
RDH11-206ENST00000554035 NECTIN2Q92692 538 aa11.3□□□□□ -0.6
RDH11-206ENST00000554035 BACH2Q9BYV9 841 aa11.3□□□□□ -0.6
RDH11-206ENST00000554035 TRPC5Q9UL62 973 aaPredicted RBP11.3□□□□□ -0.6
RDH11-206ENST00000554035 ONECUT3O60422 494 aaPredicted RBP11.29□□□□□ -0.6
RDH11-206ENST00000554035 FKBP5Q13451 457 aaPredicted RBP11.29□□□□□ -0.6
RDH11-206ENST00000554035 PDIA6Q15084 440 aa11.29□□□□□ -0.6
RDH11-206ENST00000554035 FAM98CQ17RN3 349 aaKnown RBP11.29□□□□□ -0.6
RDH11-206ENST00000554035 GJD4Q96KN9 370 aaPredicted RBP11.29□□□□□ -0.6
RDH11-206ENST00000554035 DOT1LQ8TEK3 1739 aa11.29□□□□□ -0.6
RDH11-206ENST00000554035 PRAMEF22A3QJZ6 481 aa11.28□□□□□ -0.6
RDH11-206ENST00000554035 PDE4AP27815 886 aa11.28□□□□□ -0.6
RDH11-206ENST00000554035 TEX13AQ9BXU3 409 aaPredicted RBP11.28□□□□□ -0.6
RDH11-206ENST00000554035 PHAXQ9H814 394 aaKnown RBP11.28□□□□□ -0.6
RDH11-206ENST00000554035 ATG3Q9NT62 314 aa11.28□□□□□ -0.6
RDH11-206ENST00000554035 USP16Q9Y5T5 823 aa11.28□□□□□ -0.6
RDH11-206ENST00000554035 IBTKQ9P2D0 1353 aaPredicted RBP11.28□□□□□ -0.6
RDH11-206ENST00000554035 ATP10DQ9P241 1426 aa11.27□□□□□ -0.6
RDH11-206ENST00000554035 LRP10Q7Z4F1 713 aa11.27□□□□□ -0.61
RDH11-206ENST00000554035 REM2Q8IYK8 340 aaPredicted RBP11.27□□□□□ -0.61
RDH11-206ENST00000554035 F6X3S4 739 aa11.26□□□□□ -0.61
RDH11-206ENST00000554035 DDX58O95786 925 aaKnown RBP11.26□□□□□ -0.61
RDH11-206ENST00000554035 PRIM1P49642 420 aaKnown RBP11.26□□□□□ -0.61
RDH11-206ENST00000554035 PROSER3Q2NL68 480 aa11.26□□□□□ -0.61
RDH11-206ENST00000554035 SMC5Q8IY18 1101 aa11.26□□□□□ -0.61
RDH11-206ENST00000554035 ASAP1Q9ULH1 1129 aa11.26□□□□□ -0.61
RDH11-206ENST00000554035 CICQ96RK0 1608 aaPredicted RBP11.26□□□□□ -0.61
RDH11-206ENST00000554035 ADCY9O60503 1353 aa11.26□□□□□ -0.61
RDH11-206ENST00000554035 PTCD1O75127 700 aaKnown RBP11.25□□□□□ -0.61
RDH11-206ENST00000554035 KSR2Q6VAB6 950 aa11.25□□□□□ -0.61
RDH11-206ENST00000554035 DNAAF4Q8WXU2 420 aa11.25□□□□□ -0.61
RDH11-206ENST00000554035 PI4KAP2A4QPH2 592 aa11.24□□□□□ -0.61
RDH11-206ENST00000554035 ANXA1P04083 346 aa11.24□□□□□ -0.61
RDH11-206ENST00000554035 FAM161AQ3B820 660 aa11.24□□□□□ -0.61
RDH11-206ENST00000554035 SLC4A10Q6U841 1118 aa11.24□□□□□ -0.61
RDH11-206ENST00000554035 PI4KAP1Q8N8J0 262 aa11.24□□□□□ -0.61
RDH11-206ENST00000554035 SMARCC1Q92922 1105 aaPredicted RBP11.24□□□□□ -0.61
RDH11-206ENST00000554035 ALDH1L1O75891 902 aa11.23□□□□□ -0.61
RDH11-206ENST00000554035 GNAI3P08754 354 aa11.23□□□□□ -0.61
RDH11-206ENST00000554035 BEND3Q5T5X7 828 aa11.23□□□□□ -0.61
RDH11-206ENST00000554035 SRCIN1Q9C0H9 1055 aa11.23□□□□□ -0.61
RDH11-206ENST00000554035 QTRT2Q9H974 415 aaKnown RBP11.23□□□□□ -0.61
RDH11-206ENST00000554035 ZNF831Q5JPB2 1677 aa11.23□□□□□ -0.61
RDH11-206ENST00000554035 NBPF26B4DH59 902 aa11.22□□□□□ -0.61
RDH11-206ENST00000554035 STARD3NLO95772 234 aa11.22□□□□□ -0.61
RDH11-206ENST00000554035 NBPF14Q5TI25 921 aa11.22□□□□□ -0.61
RDH11-206ENST00000554035 NBPF10Q6P3W6 841 aaKnown RBP11.22□□□□□ -0.61
RDH11-206ENST00000554035 NHSQ6T4R5 1651 aa11.22□□□□□ -0.61
RDH11-206ENST00000554035 COPS6Q7L5N1 327 aa11.22□□□□□ -0.61
RDH11-206ENST00000554035 RPAP2Q8IXW5 612 aaPredicted RBP11.22□□□□□ -0.61
RDH11-206ENST00000554035 NBPF15Q8N660 670 aa11.22□□□□□ -0.61
RDH11-206ENST00000554035 FBXO41Q8TF61 875 aa11.22□□□□□ -0.61
RDH11-206ENST00000554035 XAGE3Q8WTP9 111 aa11.22□□□□□ -0.61
RDH11-206ENST00000554035 SYTL4Q96C24 671 aaPredicted RBP11.22□□□□□ -0.61
RDH11-206ENST00000554035 MEIS3Q99687 375 aa11.22□□□□□ -0.61
RDH11-206ENST00000554035 PDZRN3Q9UPQ7 1066 aa11.22□□□□□ -0.61
RDH11-206ENST00000554035 TJP1Q07157 1748 aa11.21□□□□□ -0.61
RDH11-206ENST00000554035 CYP19A1P11511 503 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms