RNA–Protein interactions for RNA: ENST00000553925.1

SEC23A-205, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 3

Gene SEC23A, Length 484 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-205ENST00000553925 ESYT1Q9BSJ8 1104 aa7.73□□□□□ -1.17
SEC23A-205ENST00000553925 SUV39H2Q9H5I1 410 aa7.73□□□□□ -1.17
SEC23A-205ENST00000553925 USP17L5A8MUK1 530 aa7.72□□□□□ -1.17
SEC23A-205ENST00000553925 PIK3CDO00329 1044 aa7.72□□□□□ -1.17
SEC23A-205ENST00000553925 GNRH1P01148 92 aa7.72□□□□□ -1.17
SEC23A-205ENST00000553925 RFX1P22670 979 aa7.72□□□□□ -1.17
SEC23A-205ENST00000553925 MAP7D1Q3KQU3 841 aa7.72□□□□□ -1.17
SEC23A-205ENST00000553925 USP17L3A6NCW0 530 aa7.71□□□□□ -1.18
SEC23A-205ENST00000553925 USP17L4A6NCW7 530 aa7.71□□□□□ -1.18
SEC23A-205ENST00000553925 LZTS3O60299 673 aaPredicted RBP7.71□□□□□ -1.18
SEC23A-205ENST00000553925 MSX1P28360 303 aa7.71□□□□□ -1.18
SEC23A-205ENST00000553925 USP17L2Q6R6M4 530 aa7.71□□□□□ -1.18
SEC23A-205ENST00000553925 USP17L1Q7RTZ2 530 aa7.71□□□□□ -1.18
SEC23A-205ENST00000553925 PLEKHM2Q8IWE5 1019 aa7.71□□□□□ -1.18
SEC23A-205ENST00000553925 PLPP7Q8NBV4 271 aa7.71□□□□□ -1.18
SEC23A-205ENST00000553925 GGA1Q9UJY5 639 aa7.71□□□□□ -1.18
SEC23A-205ENST00000553925 FGFR3P22607 806 aa7.7□□□□□ -1.18
SEC23A-205ENST00000553925 C4orf17Q53FE4 359 aa7.7□□□□□ -1.18
SEC23A-205ENST00000553925 ALYREFQ86V81 257 aaKnown RBP7.7□□□□□ -1.18
SEC23A-205ENST00000553925 PHTF2Q8N3S3 785 aa7.7□□□□□ -1.18
SEC23A-205ENST00000553925 DOLKQ9UPQ8 538 aa7.7□□□□□ -1.18
SEC23A-205ENST00000553925 C1QTNF9BB2RNN3 333 aa7.69□□□□□ -1.18
SEC23A-205ENST00000553925 PIK3R2O00459 728 aa7.69□□□□□ -1.18
SEC23A-205ENST00000553925 EML3Q32P44 896 aa7.69□□□□□ -1.18
SEC23A-205ENST00000553925 CDCA7Q9BWT1 371 aaPredicted RBP7.69□□□□□ -1.18
SEC23A-205ENST00000553925 CHIC2Q9UKJ5 165 aa7.69□□□□□ -1.18
SEC23A-205ENST00000553925 ATXN7L1Q9ULK2 861 aaPredicted RBP7.69□□□□□ -1.18
SEC23A-205ENST00000553925 ACIN1Q9UKV3 1341 aaKnown RBP7.69□□□□□ -1.18
SEC23A-205ENST00000553925 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.68□□□□□ -1.18
SEC23A-205ENST00000553925 C2CD2LO14523 706 aa7.68□□□□□ -1.18
SEC23A-205ENST00000553925 GNB5O14775 395 aa7.68□□□□□ -1.18
SEC23A-205ENST00000553925 CTBSQ01459 385 aa7.68□□□□□ -1.18
SEC23A-205ENST00000553925 NEURL1BA8MQ27 555 aa7.67□□□□□ -1.18
SEC23A-205ENST00000553925 PLA2G4AP47712 749 aa7.67□□□□□ -1.18
SEC23A-205ENST00000553925 NCOA4Q13772 614 aa7.67□□□□□ -1.18
SEC23A-205ENST00000553925 LBRQ14739 615 aaKnown RBP7.67□□□□□ -1.18
SEC23A-205ENST00000553925 ESCO1Q5FWF5 840 aa7.67□□□□□ -1.18
SEC23A-205ENST00000553925 SLCO4C1Q6ZQN7 724 aa7.67□□□□□ -1.18
SEC23A-205ENST00000553925 SIRT1Q96EB6 747 aa7.67□□□□□ -1.18
SEC23A-205ENST00000553925 VRTNQ9H8Y1 702 aa7.67□□□□□ -1.18
SEC23A-205ENST00000553925 BNIP3LO60238 219 aa7.66□□□□□ -1.18
SEC23A-205ENST00000553925 STAU1O95793 577 aaKnown RBP7.66□□□□□ -1.18
SEC23A-205ENST00000553925 TLR1Q15399 786 aa7.66□□□□□ -1.18
SEC23A-205ENST00000553925 OXLD1Q5BKU9 147 aa7.66□□□□□ -1.18
SEC23A-205ENST00000553925 LINC00114Q6XXX2 140 aa7.66□□□□□ -1.18
SEC23A-205ENST00000553925 TRIM50Q86XT4 487 aa7.66□□□□□ -1.18
SEC23A-205ENST00000553925 DEPDC4Q8N2C3 294 aa7.66□□□□□ -1.18
SEC23A-205ENST00000553925 XAGE2Q96GT9 111 aa7.66□□□□□ -1.18
SEC23A-205ENST00000553925 BTBD6Q96KE9 485 aa7.66□□□□□ -1.18
SEC23A-205ENST00000553925 CCDC85AQ96PX6 553 aaPredicted RBP7.66□□□□□ -1.18
SEC23A-205ENST00000553925 NOD1Q9Y239 953 aa7.66□□□□□ -1.18
SEC23A-205ENST00000553925 PDE4CQ08493 712 aa7.65□□□□□ -1.18
SEC23A-205ENST00000553925 UBAP2LQ14157 1087 aaKnown RBP7.65□□□□□ -1.18
SEC23A-205ENST00000553925 DOC2BQ14184 412 aa7.65□□□□□ -1.18
SEC23A-205ENST00000553925 CD163Q86VB7 1156 aa7.65□□□□□ -1.18
SEC23A-205ENST00000553925 FHDC1Q9C0D6 1143 aaPredicted RBP7.65□□□□□ -1.18
SEC23A-205ENST00000553925 SEMA6BQ9H3T3 888 aa7.65□□□□□ -1.18
SEC23A-205ENST00000553925 NOP53Q9NZM5 478 aaKnown RBP7.65□□□□□ -1.18
SEC23A-205ENST00000553925 ATG7O95352 703 aa7.64□□□□□ -1.19
SEC23A-205ENST00000553925 EPXP11678 715 aa7.64□□□□□ -1.19
SEC23A-205ENST00000553925 CHRNA4P43681 627 aa7.64□□□□□ -1.19
SEC23A-205ENST00000553925 ATP1A2P50993 1020 aa7.64□□□□□ -1.19
SEC23A-205ENST00000553925 RHBDD1Q8TEB9 315 aa7.64□□□□□ -1.19
SEC23A-205ENST00000553925 AIDAQ96BJ3 306 aa7.64□□□□□ -1.19
SEC23A-205ENST00000553925 MKRN1Q9UHC7 482 aaKnown RBP7.64□□□□□ -1.19
SEC23A-205ENST00000553925 DCDC2BA2VCK2 349 aa7.63□□□□□ -1.19
SEC23A-205ENST00000553925 FAM196BA6NMK8 535 aa7.63□□□□□ -1.19
SEC23A-205ENST00000553925 SRPK2P78362 688 aaKnown RBP7.63□□□□□ -1.19
SEC23A-205ENST00000553925 USP4Q13107 963 aa7.63□□□□□ -1.19
SEC23A-205ENST00000553925 KANK4Q5T7N3 995 aaPredicted RBP7.63□□□□□ -1.19
SEC23A-205ENST00000553925 HOXB4P17483 251 aaPredicted RBP7.62□□□□□ -1.19
SEC23A-205ENST00000553925 CDCA8Q53HL2 280 aa7.62□□□□□ -1.19
SEC23A-205ENST00000553925 FIGNL1Q6PIW4 674 aa7.62□□□□□ -1.19
SEC23A-205ENST00000553925 LARP1Q6PKG0 1096 aaKnown RBP7.62□□□□□ -1.19
SEC23A-205ENST00000553925 RETREG2Q8NC44 543 aa7.62□□□□□ -1.19
SEC23A-205ENST00000553925 USTQ9Y2C2 406 aa7.62□□□□□ -1.19
SEC23A-205ENST00000553925 HRH3Q9Y5N1 445 aa7.62□□□□□ -1.19
SEC23A-205ENST00000553925 USP17L15C9J2P7 530 aa7.61□□□□□ -1.19
SEC23A-205ENST00000553925 USP17L10C9JJH3 530 aa7.61□□□□□ -1.19
SEC23A-205ENST00000553925 USP17L13C9JLJ4 530 aa7.61□□□□□ -1.19
SEC23A-205ENST00000553925 USP17L12C9JPN9 530 aa7.61□□□□□ -1.19
SEC23A-205ENST00000553925 USP17L11C9JVI0 530 aa7.61□□□□□ -1.19
SEC23A-205ENST00000553925 USP17L21D6R901 530 aa7.61□□□□□ -1.19
SEC23A-205ENST00000553925 USP17L18D6R9N7 530 aa7.61□□□□□ -1.19
SEC23A-205ENST00000553925 USP17L22D6RA61 530 aa7.61□□□□□ -1.19
SEC23A-205ENST00000553925 USP17L17D6RBQ6 530 aa7.61□□□□□ -1.19
SEC23A-205ENST00000553925 USP17L19D6RCP7 530 aa7.61□□□□□ -1.19
SEC23A-205ENST00000553925 USP17L20D6RJB6 530 aa7.61□□□□□ -1.19
SEC23A-205ENST00000553925 ARAFP10398 606 aa7.61□□□□□ -1.19
SEC23A-205ENST00000553925 RASA1P20936 1047 aa7.61□□□□□ -1.19
SEC23A-205ENST00000553925 DGKGP49619 791 aa7.61□□□□□ -1.19
SEC23A-205ENST00000553925 USP17L24Q0WX57 530 aa7.61□□□□□ -1.19
SEC23A-205ENST00000553925 ARSJQ5FYB0 599 aaPredicted RBP7.61□□□□□ -1.19
SEC23A-205ENST00000553925 CHSY3Q70JA7 882 aa7.61□□□□□ -1.19
SEC23A-205ENST00000553925 ZCCHC2Q9C0B9 1178 aaKnown RBP7.61□□□□□ -1.19
SEC23A-205ENST00000553925 ETNK1Q9HBU6 452 aa7.61□□□□□ -1.19
SEC23A-205ENST00000553925 RBM19Q9Y4C8 960 aaKnown RBP7.61□□□□□ -1.19
SEC23A-205ENST00000553925 KHNYNO15037 678 aaKnown RBP7.6□□□□□ -1.19
SEC23A-205ENST00000553925 ATXN7O15265 892 aaPredicted RBP7.6□□□□□ -1.19
SEC23A-205ENST00000553925 PDIA4P13667 645 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms