RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 PIK3R2O00459 728 aa6.24□□□□□ -1.41
SRP54-204ENST00000553923 PLA2G4AP47712 749 aa6.24□□□□□ -1.41
SRP54-204ENST00000553923 AVENQ9NQS1 362 aaPredicted RBP6.24□□□□□ -1.41
SRP54-204ENST00000553923 TBC1D2BQ9UPU7 963 aa6.24□□□□□ -1.41
SRP54-204ENST00000553923 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.23□□□□□ -1.41
SRP54-204ENST00000553923 ATXN7O15265 892 aaPredicted RBP6.23□□□□□ -1.41
SRP54-204ENST00000553923 MAPTP10636 758 aaKnown RBP6.23□□□□□ -1.41
SRP54-204ENST00000553923 TBC1D9Q6ZT07 1266 aa6.23□□□□□ -1.41
SRP54-204ENST00000553923 TRIM11Q96F44 468 aa6.23□□□□□ -1.41
SRP54-204ENST00000553923 KRTAP9-2Q9BYQ4 174 aa6.23□□□□□ -1.41
SRP54-204ENST00000553923 NOP53Q9NZM5 478 aaKnown RBP6.23□□□□□ -1.41
SRP54-204ENST00000553923 IQSEC3Q9UPP2 1182 aaPredicted RBP6.23□□□□□ -1.41
SRP54-204ENST00000553923 A0A1W2PNR3 127 aa6.22□□□□□ -1.41
SRP54-204ENST00000553923 APBB1O00213 710 aa6.22□□□□□ -1.41
SRP54-204ENST00000553923 SMTNP53814 917 aa6.22□□□□□ -1.41
SRP54-204ENST00000553923 GDF10P55107 478 aa6.22□□□□□ -1.41
SRP54-204ENST00000553923 BRPF1P55201 1214 aaPredicted RBP6.22□□□□□ -1.41
SRP54-204ENST00000553923 MTFR1Q15390 333 aa6.22□□□□□ -1.41
SRP54-204ENST00000553923 SLC4A9Q96Q91 983 aa6.22□□□□□ -1.41
SRP54-204ENST00000553923 CD33P20138 364 aa6.21□□□□□ -1.42
SRP54-204ENST00000553923 ADH6P28332 368 aa6.21□□□□□ -1.42
SRP54-204ENST00000553923 EIF4G2P78344 907 aaKnown RBP eCLIP6.21□□□□□ -1.42
SRP54-204ENST00000553923 SLFNL1Q499Z3 407 aa6.21□□□□□ -1.42
SRP54-204ENST00000553923 OXLD1Q5BKU9 147 aa6.21□□□□□ -1.42
SRP54-204ENST00000553923 SIRT1Q96EB6 747 aa6.21□□□□□ -1.42
SRP54-204ENST00000553923 PSMG3-AS1Q96PY0 264 aa6.21□□□□□ -1.42
SRP54-204ENST00000553923 ZIC5Q96T25 663 aa6.21□□□□□ -1.42
SRP54-204ENST00000553923 MDFIQ99750 246 aa6.21□□□□□ -1.42
SRP54-204ENST00000553923 NIFKQ9BYG3 293 aaKnown RBP6.21□□□□□ -1.42
SRP54-204ENST00000553923 USP3Q9Y6I4 520 aa6.21□□□□□ -1.42
SRP54-204ENST00000553923 DCDC2BA2VCK2 349 aa6.2□□□□□ -1.42
SRP54-204ENST00000553923 TMEM229AB2RXF0 380 aa6.2□□□□□ -1.42
SRP54-204ENST00000553923 DOC2BQ14184 412 aa6.2□□□□□ -1.42
SRP54-204ENST00000553923 BCANQ96GW7 911 aa6.2□□□□□ -1.42
SRP54-204ENST00000553923 STRN4Q9NRL3 753 aa6.2□□□□□ -1.42
SRP54-204ENST00000553923 KRTAP9-6A0A140TA67 174 aa6.19□□□□□ -1.42
SRP54-204ENST00000553923 CDK2AP1O14519 115 aa6.19□□□□□ -1.42
SRP54-204ENST00000553923 FAM157BP0CG42 384 aa6.19□□□□□ -1.42
SRP54-204ENST00000553923 ZNF468Q5VIY5 522 aaPredicted RBP6.19□□□□□ -1.42
SRP54-204ENST00000553923 AIDAQ96BJ3 306 aa6.19□□□□□ -1.42
SRP54-204ENST00000553923 SEMA6BQ9H3T3 888 aa6.19□□□□□ -1.42
SRP54-204ENST00000553923 ZDHHC3Q9NYG2 299 aa6.19□□□□□ -1.42
SRP54-204ENST00000553923 A6NJY4 79 aa6.18□□□□□ -1.42
SRP54-204ENST00000553923 KHNYNO15037 678 aaKnown RBP6.18□□□□□ -1.42
SRP54-204ENST00000553923 EFSO43281 561 aa6.18□□□□□ -1.42
SRP54-204ENST00000553923 COL9A3Q14050 684 aaPredicted RBP6.18□□□□□ -1.42
SRP54-204ENST00000553923 SAMD5Q5TGI4 173 aa6.18□□□□□ -1.42
SRP54-204ENST00000553923 PLVAPQ9BX97 442 aa6.18□□□□□ -1.42
SRP54-204ENST00000553923 PCBP4P57723 403 aaKnown RBP6.17□□□□□ -1.42
SRP54-204ENST00000553923 VAC14Q08AM6 782 aa6.17□□□□□ -1.42
SRP54-204ENST00000553923 RSPO4Q2I0M5 234 aaPredicted RBP6.17□□□□□ -1.42
SRP54-204ENST00000553923 MAP7D1Q3KQU3 841 aa6.17□□□□□ -1.42
SRP54-204ENST00000553923 PLPP7Q8NBV4 271 aa6.17□□□□□ -1.42
SRP54-204ENST00000553923 C7orf43Q8WVR3 580 aa6.17□□□□□ -1.42
SRP54-204ENST00000553923 PCDHGA11Q9Y5H2 935 aa6.17□□□□□ -1.42
SRP54-204ENST00000553923 SPATA31C1P0DKV0 1188 aa6.16□□□□□ -1.42
SRP54-204ENST00000553923 GATA4P43694 442 aa6.16□□□□□ -1.42
SRP54-204ENST00000553923 LAMC2Q13753 1193 aa6.16□□□□□ -1.42
SRP54-204ENST00000553923 FOXD4L6Q3SYB3 417 aaPredicted RBP6.16□□□□□ -1.42
SRP54-204ENST00000553923 ARSJQ5FYB0 599 aaPredicted RBP6.16□□□□□ -1.42
SRP54-204ENST00000553923 NKAPLQ5M9Q1 402 aa6.16□□□□□ -1.42
SRP54-204ENST00000553923 FOXD4L3Q6VB84 417 aaPredicted RBP6.16□□□□□ -1.42
SRP54-204ENST00000553923 SERTAD1Q9UHV2 236 aa6.16□□□□□ -1.42
SRP54-204ENST00000553923 ELOA3CA0A087WX78 387 aaPredicted RBP6.15□□□□□ -1.42
SRP54-204ENST00000553923 ELOA3DA6NLF2 546 aaPredicted RBP6.15□□□□□ -1.42
SRP54-204ENST00000553923 NBPF1Q3BBV0 1214 aa6.15□□□□□ -1.42
SRP54-204ENST00000553923 ELOA3BQ3SY89 546 aa6.15□□□□□ -1.42
SRP54-204ENST00000553923 ELOA3Q8NG57 546 aa6.15□□□□□ -1.42
SRP54-204ENST00000553923 ZDHHC1Q8WTX9 485 aa6.15□□□□□ -1.42
SRP54-204ENST00000553923 MARK1Q9P0L2 795 aa6.15□□□□□ -1.42
SRP54-204ENST00000553923 TATP17735 454 aaPredicted RBP6.14□□□□□ -1.43
SRP54-204ENST00000553923 TXLNAP40222 546 aa6.14□□□□□ -1.43
SRP54-204ENST00000553923 ADARB2-AS1A8MUL3 147 aa6.13□□□□□ -1.43
SRP54-204ENST00000553923 ZMYM1Q5SVZ6 1142 aa6.13□□□□□ -1.43
SRP54-204ENST00000553923 SYT9Q86SS6 491 aa6.13□□□□□ -1.43
SRP54-204ENST00000553923 TPSG1Q9NRR2 321 aa6.13□□□□□ -1.43
SRP54-204ENST00000553923 CABP1Q9NZU7 370 aa6.13□□□□□ -1.43
SRP54-204ENST00000553923 STARD13Q9Y3M8 1113 aa6.13□□□□□ -1.43
SRP54-204ENST00000553923 PARP3Q9Y6F1 533 aa6.13□□□□□ -1.43
SRP54-204ENST00000553923 PIK3CDO00329 1044 aa6.12□□□□□ -1.43
SRP54-204ENST00000553923 EML1O00423 815 aa6.12□□□□□ -1.43
SRP54-204ENST00000553923 SIN3BO75182 1162 aa6.12□□□□□ -1.43
SRP54-204ENST00000553923 EPHA4P54764 986 aa6.12□□□□□ -1.43
SRP54-204ENST00000553923 GDPD2Q9HCC8 539 aa6.12□□□□□ -1.43
SRP54-204ENST00000553923 PRM3Q9NNZ6 103 aa6.12□□□□□ -1.43
SRP54-204ENST00000553923 PRDM6Q9NQX0 595 aa6.12□□□□□ -1.43
SRP54-204ENST00000553923 SCHIP1Q9P0W5 487 aaPredicted RBP6.12□□□□□ -1.43
SRP54-204ENST00000553923 PRR12Q9ULL5 1215 aa6.12□□□□□ -1.43
SRP54-204ENST00000553923 TEAD4Q15561 434 aa6.11□□□□□ -1.43
SRP54-204ENST00000553923 TNFRSF25Q93038 417 aa6.11□□□□□ -1.43
SRP54-204ENST00000553923 ALAS2P22557 587 aa6.1□□□□□ -1.43
SRP54-204ENST00000553923 SFSWAPQ12872 951 aaKnown RBP6.1□□□□□ -1.43
SRP54-204ENST00000553923 WASHC4Q2M389 1173 aa6.1□□□□□ -1.43
SRP54-204ENST00000553923 C8orf86Q6ZUL3 223 aa6.1□□□□□ -1.43
SRP54-204ENST00000553923 L3MBTL2Q969R5 705 aa6.1□□□□□ -1.43
SRP54-204ENST00000553923 SLC30A3Q99726 388 aa6.1□□□□□ -1.43
SRP54-204ENST00000553923 GJA3Q9Y6H8 435 aa6.1□□□□□ -1.43
SRP54-204ENST00000553923 DYRK3O43781 588 aa6.09□□□□□ -1.43
SRP54-204ENST00000553923 NID1P14543 1247 aa6.09□□□□□ -1.43
SRP54-204ENST00000553923 NOS2P35228 1153 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms