RNA–Protein interactions for RNA: ENST00000553889.5

PRKCH-209, Transcript of protein kinase C eta, human

TSL 4

Gene PRKCH, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-209	ENST00000553889	RBM33	Q96EV2	1170 aa	Known RBP	11.35	□□□□□ -0.59
PRKCH-209	ENST00000553889	DDX21	Q9NR30	783 aa	Known RBP eCLIP	11.35	□□□□□ -0.59
PRKCH-209	ENST00000553889	CHPF2	Q9P2E5	772 aa		11.35	□□□□□ -0.59
PRKCH-209	ENST00000553889	PI4KAP2	A4QPH2	592 aa		11.34	□□□□□ -0.59
PRKCH-209	ENST00000553889	DDX11L8	A8MPP1	907 aa		11.34	□□□□□ -0.59
PRKCH-209	ENST00000553889	SMARCA5	O60264	1052 aa	Predicted RBP	11.34	□□□□□ -0.59
PRKCH-209	ENST00000553889	RAB3GAP1	Q15042	981 aa		11.34	□□□□□ -0.59
PRKCH-209	ENST00000553889	MPRIP	Q6WCQ1	1025 aa		11.34	□□□□□ -0.59
PRKCH-209	ENST00000553889	PI4KAP1	Q8N8J0	262 aa		11.34	□□□□□ -0.59
PRKCH-209	ENST00000553889	LINS1	Q8NG48	757 aa		11.34	□□□□□ -0.59
PRKCH-209	ENST00000553889	KIF1BP	Q96EK5	621 aa		11.34	□□□□□ -0.59
PRKCH-209	ENST00000553889	ISY1	Q9ULR0	285 aa	Known RBP	11.34	□□□□□ -0.59
PRKCH-209	ENST00000553889	SPG7	Q9UQ90	795 aa		11.34	□□□□□ -0.59
PRKCH-209	ENST00000553889	PARP4	Q9UKK3	1724 aa	Known RBP	11.34	□□□□□ -0.59
PRKCH-209	ENST00000553889	KCNQ3	O43525	872 aa		11.33	□□□□□ -0.6
PRKCH-209	ENST00000553889	HSP90AB1	P08238	724 aa	Known RBP	11.33	□□□□□ -0.6
PRKCH-209	ENST00000553889	TAT	P17735	454 aa	Predicted RBP	11.33	□□□□□ -0.6
PRKCH-209	ENST00000553889	PPP1R42	Q7Z4L9	355 aa		11.33	□□□□□ -0.6
PRKCH-209	ENST00000553889	RAPGEF4	Q8WZA2	1011 aa		11.33	□□□□□ -0.6
PRKCH-209	ENST00000553889	SLC52A2	Q9HAB3	445 aa		11.33	□□□□□ -0.6
PRKCH-209	ENST00000553889	CWC22	Q9HCG8	908 aa	Known RBP	11.33	□□□□□ -0.6
PRKCH-209	ENST00000553889	EXOC6B	Q9Y2D4	811 aa		11.33	□□□□□ -0.6
PRKCH-209	ENST00000553889	KDM6A	O15550	1401 aa	Predicted RBP	11.33	□□□□□ -0.6
PRKCH-209	ENST00000553889	RGPD5	Q99666	1765 aa		11.32	□□□□□ -0.6
PRKCH-209	ENST00000553889	DDX58	O95786	925 aa	Known RBP	11.32	□□□□□ -0.6
PRKCH-209	ENST00000553889	PHKG2	P15735	406 aa		11.32	□□□□□ -0.6
PRKCH-209	ENST00000553889	CHML	P26374	656 aa		11.32	□□□□□ -0.6
PRKCH-209	ENST00000553889	MCM2	P49736	904 aa		11.32	□□□□□ -0.6
PRKCH-209	ENST00000553889	PDIA6	Q15084	440 aa		11.32	□□□□□ -0.6
PRKCH-209	ENST00000553889	ZNF790	Q6PG37	636 aa		11.32	□□□□□ -0.6
PRKCH-209	ENST00000553889	IFNL2	Q8IZJ0	200 aa		11.32	□□□□□ -0.6
PRKCH-209	ENST00000553889	RHPN1	Q8TCX5	695 aa		11.32	□□□□□ -0.6
PRKCH-209	ENST00000553889	DCAF5	Q96JK2	942 aa		11.32	□□□□□ -0.6
PRKCH-209	ENST00000553889	ESYT1	Q9BSJ8	1104 aa		11.32	□□□□□ -0.6
PRKCH-209	ENST00000553889	ERBB4	Q15303	1308 aa		11.32	□□□□□ -0.6
PRKCH-209	ENST00000553889	TTC41P	Q6P2S7	1318 aa		11.32	□□□□□ -0.6
PRKCH-209	ENST00000553889	CD2BP2	O95400	341 aa	Known RBP	11.31	□□□□□ -0.6
PRKCH-209	ENST00000553889	SKOR2	Q2VWA4	1001 aa	Predicted RBP	11.31	□□□□□ -0.6
PRKCH-209	ENST00000553889	ERC1	Q8IUD2	1116 aa		11.31	□□□□□ -0.6
PRKCH-209	ENST00000553889	MEGF6	O75095	1541 aa		11.3	□□□□□ -0.6
PRKCH-209	ENST00000553889	ST18	O60284	1047 aa		11.3	□□□□□ -0.6
PRKCH-209	ENST00000553889	NBPF7	P0C2Y1	421 aa	Predicted RBP	11.3	□□□□□ -0.6
PRKCH-209	ENST00000553889	EIF2S2	P20042	333 aa	Known RBP	11.3	□□□□□ -0.6
PRKCH-209	ENST00000553889	XPC	Q01831	940 aa	Predicted RBP	11.3	□□□□□ -0.6
PRKCH-209	ENST00000553889	PI4K2B	Q8TCG2	481 aa		11.3	□□□□□ -0.6
PRKCH-209	ENST00000553889	NECTIN2	Q92692	538 aa		11.3	□□□□□ -0.6
PRKCH-209	ENST00000553889	SOS2	Q07890	1332 aa	Predicted RBP	11.3	□□□□□ -0.6
PRKCH-209	ENST00000553889	XIRP1	Q702N8	1843 aa	Known RBP	11.3	□□□□□ -0.6
PRKCH-209	ENST00000553889	CYP2E1	P05181	493 aa	Predicted RBP	11.29	□□□□□ -0.6
PRKCH-209	ENST00000553889	NUCB2	P80303	420 aa		11.29	□□□□□ -0.6
PRKCH-209	ENST00000553889	NKX1-1	Q15270	411 aa	Predicted RBP	11.29	□□□□□ -0.6
PRKCH-209	ENST00000553889	LARP1	Q6PKG0	1096 aa	Known RBP	11.29	□□□□□ -0.6
PRKCH-209	ENST00000553889	LRP10	Q7Z4F1	713 aa		11.29	□□□□□ -0.6
PRKCH-209	ENST00000553889	TICAM2	Q86XR7	235 aa		11.29	□□□□□ -0.6
PRKCH-209	ENST00000553889	GBP4	Q96PP9	640 aa		11.29	□□□□□ -0.6
PRKCH-209	ENST00000553889	MAP3K2	Q9Y2U5	619 aa		11.29	□□□□□ -0.6
PRKCH-209	ENST00000553889	FSD2	A1L4K1	749 aa		11.28	□□□□□ -0.6
PRKCH-209	ENST00000553889	SRGAP3	O43295	1099 aa		11.28	□□□□□ -0.6
PRKCH-209	ENST00000553889	SURF6	O75683	361 aa	Known RBP	11.28	□□□□□ -0.6
PRKCH-209	ENST00000553889	SNRPA1	P09661	255 aa	Known RBP	11.28	□□□□□ -0.6
PRKCH-209	ENST00000553889	MCC	P23508	829 aa		11.28	□□□□□ -0.6
PRKCH-209	ENST00000553889	RBM42	Q9BTD8	480 aa	Known RBP	11.28	□□□□□ -0.6
PRKCH-209	ENST00000553889	GRM8	O00222	908 aa		11.27	□□□□□ -0.61
PRKCH-209	ENST00000553889	CYP27B1	O15528	508 aa		11.27	□□□□□ -0.61
PRKCH-209	ENST00000553889	GLRX3	O76003	335 aa	Known RBP	11.27	□□□□□ -0.61
PRKCH-209	ENST00000553889	ZC3H6	P61129	1189 aa	Known RBP	11.27	□□□□□ -0.61
PRKCH-209	ENST00000553889	CUL4A	Q13619	759 aa		11.27	□□□□□ -0.61
PRKCH-209	ENST00000553889	L1TD1	Q5T7N2	865 aa	Known RBP	11.27	□□□□□ -0.61
PRKCH-209	ENST00000553889	LMOD2	Q6P5Q4	547 aa		11.27	□□□□□ -0.61
PRKCH-209	ENST00000553889	TNPO1	Q92973	898 aa	Known RBP	11.27	□□□□□ -0.61
PRKCH-209	ENST00000553889	INTS4	Q96HW7	963 aa	Known RBP	11.27	□□□□□ -0.61
PRKCH-209	ENST00000553889	SNRK	Q9NRH2	765 aa		11.27	□□□□□ -0.61
PRKCH-209	ENST00000553889	NLRP2	Q9NX02	1062 aa		11.27	□□□□□ -0.61
PRKCH-209	ENST00000553889	GLI3	P10071	1580 aa		11.27	□□□□□ -0.61
PRKCH-209	ENST00000553889	ERVV-2	B6SEH9	535 aa		11.26	□□□□□ -0.61
PRKCH-209	ENST00000553889	TRAK2	O60296	914 aa		11.26	□□□□□ -0.61
PRKCH-209	ENST00000553889	PROSER3	Q2NL68	480 aa		11.26	□□□□□ -0.61
PRKCH-209	ENST00000553889	BRINP3	Q76B58	766 aa		11.26	□□□□□ -0.61
PRKCH-209	ENST00000553889	METTL22	Q9BUU2	404 aa	Predicted RBP	11.26	□□□□□ -0.61
PRKCH-209	ENST00000553889	BCL11A	Q9H165	835 aa		11.26	□□□□□ -0.61
PRKCH-209	ENST00000553889	WDR17	Q8IZU2	1322 aa		11.26	□□□□□ -0.61
PRKCH-209	ENST00000553889	ZBTB7C	A1YPR0	619 aa		11.25	□□□□□ -0.61
PRKCH-209	ENST00000553889	APBB1	O00213	710 aa		11.25	□□□□□ -0.61
PRKCH-209	ENST00000553889	SGSM2	O43147	1006 aa		11.25	□□□□□ -0.61
PRKCH-209	ENST00000553889	PLEKHG5	O94827	1062 aa		11.25	□□□□□ -0.61
PRKCH-209	ENST00000553889	ADRA2B	P18089	450 aa		11.25	□□□□□ -0.61
PRKCH-209	ENST00000553889	CNTROB	Q8N137	903 aa		11.25	□□□□□ -0.61
PRKCH-209	ENST00000553889	CLASRP	Q8N2M8	674 aa	Known RBP	11.25	□□□□□ -0.61
PRKCH-209	ENST00000553889	KCNB2	Q92953	911 aa		11.25	□□□□□ -0.61
PRKCH-209	ENST00000553889	KAZALD1	Q96I82	304 aa		11.25	□□□□□ -0.61
PRKCH-209	ENST00000553889	FMNL2	Q96PY5	1086 aa		11.25	□□□□□ -0.61
PRKCH-209	ENST00000553889	C9orf78	Q9NZ63	289 aa	Predicted RBP	11.25	□□□□□ -0.61
PRKCH-209	ENST00000553889	LAMB4	A4D0S4	1761 aa		11.25	□□□□□ -0.61
PRKCH-209	ENST00000553889	C5	P01031	1676 aa		11.24	□□□□□ -0.61
PRKCH-209	ENST00000553889	IGKV5-2	P06315	115 aa		11.24	□□□□□ -0.61
PRKCH-209	ENST00000553889	HSPA4	P34932	840 aa		11.24	□□□□□ -0.61
PRKCH-209	ENST00000553889	NEXN	Q0ZGT2	675 aa		11.24	□□□□□ -0.61
PRKCH-209	ENST00000553889	RABL6	Q3YEC7	729 aa	Predicted RBP	11.24	□□□□□ -0.61
PRKCH-209	ENST00000553889	NFATC2IP	Q8NCF5	419 aa		11.24	□□□□□ -0.61
PRKCH-209	ENST00000553889	ZNF496	Q96IT1	587 aa	Predicted RBP	11.24	□□□□□ -0.61

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