RNA–Protein interactions for RNA: ENST00000553851.2

PRAF2-202, Transcript of PRA1 domain family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAF2, Length 1,334 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAF2-202ENST00000553851 ZPR1O75312 459 aa26.83■■□□□ 1.89
PRAF2-202ENST00000553851 PLEKHF1Q96S99 279 aa26.83■■□□□ 1.89
PRAF2-202ENST00000553851 TEX13AQ9BXU3 409 aaPredicted RBP26.83■■□□□ 1.89
PRAF2-202ENST00000553851 CANXP27824 592 aaKnown RBP26.82■■□□□ 1.88
PRAF2-202ENST00000553851 USPL1Q5W0Q7 1092 aa26.81■■□□□ 1.88
PRAF2-202ENST00000553851 PNNQ9H307 717 aaKnown RBP26.81■■□□□ 1.88
PRAF2-202ENST00000553851 CHD4Q14839 1912 aa26.8■■□□□ 1.88
PRAF2-202ENST00000553851 COL15A1P39059 1388 aa26.8■■□□□ 1.88
PRAF2-202ENST00000553851 NARFQ9UHQ1 456 aa26.79■■□□□ 1.88
PRAF2-202ENST00000553851 WWC3Q9ULE0 1092 aa26.79■■□□□ 1.88
PRAF2-202ENST00000553851 MYBBP1AQ9BQG0 1328 aaKnown RBP26.78■■□□□ 1.88
PRAF2-202ENST00000553851 ZEB1P37275 1124 aaPredicted RBP26.77■■□□□ 1.88
PRAF2-202ENST00000553851 NFE2L2Q16236 605 aa26.77■■□□□ 1.88
PRAF2-202ENST00000553851 TM4SF1P30408 202 aa26.76■■□□□ 1.87
PRAF2-202ENST00000553851 EIF5P55010 431 aaKnown RBP26.76■■□□□ 1.87
PRAF2-202ENST00000553851 TGFB2P61812 414 aa26.76■■□□□ 1.87
PRAF2-202ENST00000553851 DDR1Q08345 913 aa26.76■■□□□ 1.87
PRAF2-202ENST00000553851 TAF7Q15545 349 aaPredicted RBP26.76■■□□□ 1.87
PRAF2-202ENST00000553851 MAPK8IP3Q9UPT6 1336 aa26.75■■□□□ 1.87
PRAF2-202ENST00000553851 C10orf71Q711Q0 1435 aa26.74■■□□□ 1.87
PRAF2-202ENST00000553851 A0A087WZG4 1122 aa26.74■■□□□ 1.87
PRAF2-202ENST00000553851 A0A0G2JLW4 131 aa26.74■■□□□ 1.87
PRAF2-202ENST00000553851 A1BGP04217 495 aa26.74■■□□□ 1.87
PRAF2-202ENST00000553851 ZNF784Q8NCA9 323 aaPredicted RBP26.74■■□□□ 1.87
PRAF2-202ENST00000553851 MIS18AQ9NYP9 233 aa26.73■■□□□ 1.87
PRAF2-202ENST00000553851 USP16Q9Y5T5 823 aa26.73■■□□□ 1.87
PRAF2-202ENST00000553851 PXDNLA1KZ92 1463 aa26.73■■□□□ 1.87
PRAF2-202ENST00000553851 POLRMTO00411 1230 aaKnown RBP26.72■■□□□ 1.87
PRAF2-202ENST00000553851 BCL2L12Q9HB09 334 aa26.72■■□□□ 1.87
PRAF2-202ENST00000553851 ZNF330Q9Y3S2 320 aaPredicted RBP26.72■■□□□ 1.87
PRAF2-202ENST00000553851 KIF13BQ9NQT8 1826 aa26.72■■□□□ 1.87
PRAF2-202ENST00000553851 SNRPA1P09661 255 aaKnown RBP26.71■■□□□ 1.87
PRAF2-202ENST00000553851 IL6STP40189 918 aaPredicted RBP26.71■■□□□ 1.87
PRAF2-202ENST00000553851 PRAMEF22A3QJZ6 481 aa26.7■■□□□ 1.87
PRAF2-202ENST00000553851 DPEP1P16444 411 aa26.7■■□□□ 1.87
PRAF2-202ENST00000553851 NFIXQ14938 502 aa26.7■■□□□ 1.87
PRAF2-202ENST00000553851 THUMPD2Q9BTF0 503 aaKnown RBP26.69■■□□□ 1.86
PRAF2-202ENST00000553851 DLG5Q8TDM6 1919 aa26.69■■□□□ 1.86
PRAF2-202ENST00000553851 NPM2Q86SE8 214 aaKnown RBP26.68■■□□□ 1.86
PRAF2-202ENST00000553851 PNISRQ8TF01 805 aaKnown RBP26.68■■□□□ 1.86
PRAF2-202ENST00000553851 PRKRIP1Q9H875 184 aaPredicted RBP26.68■■□□□ 1.86
PRAF2-202ENST00000553851 TBC1D2BQ9UPU7 963 aa26.68■■□□□ 1.86
PRAF2-202ENST00000553851 N4BP2Q86UW6 1770 aaPredicted RBP26.67■■□□□ 1.86
PRAF2-202ENST00000553851 PIP4K2AP48426 406 aaPredicted RBP26.66■■□□□ 1.86
PRAF2-202ENST00000553851 RIPK4P57078 832 aa26.65■■□□□ 1.86
PRAF2-202ENST00000553851 BCS1LQ9Y276 419 aa26.65■■□□□ 1.86
PRAF2-202ENST00000553851 KIAA1551Q9HCM1 1747 aa26.65■■□□□ 1.86
PRAF2-202ENST00000553851 SERPINB2P05120 415 aa26.65■■□□□ 1.86
PRAF2-202ENST00000553851 KCNA3P22001 575 aa26.65■■□□□ 1.86
PRAF2-202ENST00000553851 BICDL1Q6ZP65 573 aa26.65■■□□□ 1.86
PRAF2-202ENST00000553851 WDR43Q15061 677 aaKnown RBP eCLIP26.64■■□□□ 1.85
PRAF2-202ENST00000553851 TMPOP42166 694 aaKnown RBP26.63■■□□□ 1.85
PRAF2-202ENST00000553851 TBC1D9BQ66K14 1250 aa26.63■■□□□ 1.85
PRAF2-202ENST00000553851 CCDC146Q8IYE0 955 aa26.63■■□□□ 1.85
PRAF2-202ENST00000553851 DZIP3Q86Y13 1208 aaKnown RBP26.62■■□□□ 1.85
PRAF2-202ENST00000553851 PIM2Q9P1W9 311 aa26.62■■□□□ 1.85
PRAF2-202ENST00000553851 CAMTA2O94983 1202 aa26.61■■□□□ 1.85
PRAF2-202ENST00000553851 CHRNA5P30532 468 aa26.61■■□□□ 1.85
PRAF2-202ENST00000553851 EIF4A1P60842 406 aaKnown RBP26.6■■□□□ 1.85
PRAF2-202ENST00000553851 NBPF26B4DH59 902 aa26.59■■□□□ 1.85
PRAF2-202ENST00000553851 NBPF10Q6P3W6 841 aaKnown RBP26.59■■□□□ 1.85
PRAF2-202ENST00000553851 NBPF15Q8N660 670 aa26.59■■□□□ 1.85
PRAF2-202ENST00000553851 ADAMTS8Q9UP79 889 aa26.59■■□□□ 1.85
PRAF2-202ENST00000553851 RRP7AQ9Y3A4 280 aaKnown RBP26.59■■□□□ 1.85
PRAF2-202ENST00000553851 GIGYF1O75420 1035 aaPredicted RBP26.58■■□□□ 1.85
PRAF2-202ENST00000553851 LMOD3Q0VAK6 560 aa26.58■■□□□ 1.85
PRAF2-202ENST00000553851 RUNDC1Q96C34 613 aa26.58■■□□□ 1.85
PRAF2-202ENST00000553851 AFDNP55196 1824 aaKnown RBP26.57■■□□□ 1.84
PRAF2-202ENST00000553851 NEUROD2Q15784 382 aa26.57■■□□□ 1.84
PRAF2-202ENST00000553851 DALRD3Q5D0E6 543 aaKnown RBP26.57■■□□□ 1.84
PRAF2-202ENST00000553851 ARHGAP27Q6ZUM4 889 aa26.56■■□□□ 1.84
PRAF2-202ENST00000553851 TSPYL4Q9UJ04 414 aa26.56■■□□□ 1.84
PRAF2-202ENST00000553851 KDM3BQ7LBC6 1761 aa26.56■■□□□ 1.84
PRAF2-202ENST00000553851 NRXN2Q9P2S2 1712 aa26.55■■□□□ 1.84
PRAF2-202ENST00000553851 SETDB2Q96T68 719 aa26.55■■□□□ 1.84
PRAF2-202ENST00000553851 SCN7AQ01118 1682 aa26.54■■□□□ 1.84
PRAF2-202ENST00000553851 BRCA1P38398 1863 aaKnown RBP26.53■■□□□ 1.84
PRAF2-202ENST00000553851 CLEC4GQ6UXB4 293 aa26.53■■□□□ 1.84
PRAF2-202ENST00000553851 CARMIL3Q8ND23 1372 aa26.53■■□□□ 1.84
PRAF2-202ENST00000553851 ZNF316A6NFI3 1004 aaPredicted RBP26.51■■□□□ 1.83
PRAF2-202ENST00000553851 PRR5LQ6MZQ0 368 aa26.51■■□□□ 1.83
PRAF2-202ENST00000553851 C2CD5Q86YS7 1000 aa26.51■■□□□ 1.83
PRAF2-202ENST00000553851 BABAM1Q9NWV8 329 aa26.51■■□□□ 1.83
PRAF2-202ENST00000553851 ZNF652Q9Y2D9 606 aa26.51■■□□□ 1.83
PRAF2-202ENST00000553851 ATP10DQ9P241 1426 aa26.51■■□□□ 1.83
PRAF2-202ENST00000553851 CCDC24Q8N4L8 307 aa26.5■■□□□ 1.83
PRAF2-202ENST00000553851 NGEFQ8N5V2 710 aa26.5■■□□□ 1.83
PRAF2-202ENST00000553851 TRIM35Q9UPQ4 493 aa26.5■■□□□ 1.83
PRAF2-202ENST00000553851 ADCY9O60503 1353 aa26.49■■□□□ 1.83
PRAF2-202ENST00000553851 H0YIN7 160 aa26.49■■□□□ 1.83
PRAF2-202ENST00000553851 NPHP1O15259 732 aa26.48■■□□□ 1.83
PRAF2-202ENST00000553851 BRIP1Q9BX63 1249 aa26.48■■□□□ 1.83
PRAF2-202ENST00000553851 LAMB4A4D0S4 1761 aa26.47■■□□□ 1.83
PRAF2-202ENST00000553851 BCORQ6W2J9 1755 aa26.47■■□□□ 1.83
PRAF2-202ENST00000553851 MYL6BP14649 208 aa26.47■■□□□ 1.83
PRAF2-202ENST00000553851 CNBD1Q8NA66 436 aa26.47■■□□□ 1.83
PRAF2-202ENST00000553851 RGL2O15211 777 aa26.46■■□□□ 1.83
PRAF2-202ENST00000553851 PDE6BP35913 854 aa26.46■■□□□ 1.83
PRAF2-202ENST00000553851 HLFQ16534 295 aa26.46■■□□□ 1.83
PRAF2-202ENST00000553851 TTLL6Q8N841 843 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms