RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 BCL2L12Q9HB09 334 aa12.65□□□□□ -0.38
PRKCH-208ENST00000553846 UBR2Q8IWV8 1755 aa12.64□□□□□ -0.39
PRKCH-208ENST00000553846 PTCD1O75127 700 aaKnown RBP12.64□□□□□ -0.39
PRKCH-208ENST00000553846 HSP90AB1P08238 724 aaKnown RBP12.64□□□□□ -0.39
PRKCH-208ENST00000553846 NFIXQ14938 502 aa12.64□□□□□ -0.39
PRKCH-208ENST00000553846 VIRMAQ69YN4 1812 aaKnown RBP12.64□□□□□ -0.39
PRKCH-208ENST00000553846 PIAS4Q8N2W9 510 aaPredicted RBP12.63□□□□□ -0.39
PRKCH-208ENST00000553846 SCN7AQ01118 1682 aa12.63□□□□□ -0.39
PRKCH-208ENST00000553846 ADAMTSL1Q8N6G6 1762 aa12.63□□□□□ -0.39
PRKCH-208ENST00000553846 CNTNAP1P78357 1384 aa12.62□□□□□ -0.39
PRKCH-208ENST00000553846 CABP4P57796 275 aa12.62□□□□□ -0.39
PRKCH-208ENST00000553846 USPL1Q5W0Q7 1092 aa12.62□□□□□ -0.39
PRKCH-208ENST00000553846 ZNF530Q6P9A1 599 aaPredicted RBP12.62□□□□□ -0.39
PRKCH-208ENST00000553846 CREBZFQ9NS37 354 aa12.62□□□□□ -0.39
PRKCH-208ENST00000553846 ARFGEF2Q9Y6D5 1785 aa12.61□□□□□ -0.39
PRKCH-208ENST00000553846 COL15A1P39059 1388 aa12.61□□□□□ -0.39
PRKCH-208ENST00000553846 FOXN1O15353 648 aa12.61□□□□□ -0.39
PRKCH-208ENST00000553846 CDCA8Q53HL2 280 aa12.61□□□□□ -0.39
PRKCH-208ENST00000553846 AEBP1Q8IUX7 1158 aa12.61□□□□□ -0.39
PRKCH-208ENST00000553846 NFATC2IPQ8NCF5 419 aa12.61□□□□□ -0.39
PRKCH-208ENST00000553846 PASKQ96RG2 1323 aa12.61□□□□□ -0.39
PRKCH-208ENST00000553846 POTEIP0CG38 1075 aa12.6□□□□□ -0.39
PRKCH-208ENST00000553846 POTEJP0CG39 1038 aa12.6□□□□□ -0.39
PRKCH-208ENST00000553846 CYP19A1P11511 503 aaPredicted RBP12.6□□□□□ -0.39
PRKCH-208ENST00000553846 AMOTQ4VCS5 1084 aa12.6□□□□□ -0.39
PRKCH-208ENST00000553846 PLEKHO1Q53GL0 409 aaPredicted RBP12.6□□□□□ -0.39
PRKCH-208ENST00000553846 DNAJC10Q8IXB1 793 aa12.6□□□□□ -0.39
PRKCH-208ENST00000553846 PRDM10Q9NQV6 1147 aa12.6□□□□□ -0.39
PRKCH-208ENST00000553846 NARFQ9UHQ1 456 aa12.6□□□□□ -0.39
PRKCH-208ENST00000553846 THSD7BQ9C0I4 1608 aa12.59□□□□□ -0.39
PRKCH-208ENST00000553846 TTLL6Q8N841 843 aa12.59□□□□□ -0.39
PRKCH-208ENST00000553846 LTBP3Q9NS15 1303 aa12.59□□□□□ -0.39
PRKCH-208ENST00000553846 MTHFSP49914 203 aa12.58□□□□□ -0.4
PRKCH-208ENST00000553846 MKRN1Q9UHC7 482 aaKnown RBP12.58□□□□□ -0.4
PRKCH-208ENST00000553846 ZBTB1Q9Y2K1 713 aa12.58□□□□□ -0.4
PRKCH-208ENST00000553846 SCN4AP35499 1836 aa12.58□□□□□ -0.4
PRKCH-208ENST00000553846 SLX4Q8IY92 1834 aa12.58□□□□□ -0.4
PRKCH-208ENST00000553846 SERPINB2P05120 415 aa12.57□□□□□ -0.4
PRKCH-208ENST00000553846 CHADLQ6NUI6 762 aa12.57□□□□□ -0.4
PRKCH-208ENST00000553846 C2CD5Q86YS7 1000 aa12.57□□□□□ -0.4
PRKCH-208ENST00000553846 TNRC18O15417 2968 aaPredicted RBP12.57□□□□□ -0.4
PRKCH-208ENST00000553846 ZPR1O75312 459 aa12.56□□□□□ -0.4
PRKCH-208ENST00000553846 TNNT2P45379 298 aaPredicted RBP12.55□□□□□ -0.4
PRKCH-208ENST00000553846 SLC52A2Q9HAB3 445 aa12.55□□□□□ -0.4
PRKCH-208ENST00000553846 BCORQ6W2J9 1755 aa12.55□□□□□ -0.4
PRKCH-208ENST00000553846 CACNA1SQ13698 1873 aa12.55□□□□□ -0.4
PRKCH-208ENST00000553846 SIPA1L3O60292 1781 aaPredicted RBP12.54□□□□□ -0.4
PRKCH-208ENST00000553846 ITGBL1O95965 494 aaPredicted RBP12.54□□□□□ -0.4
PRKCH-208ENST00000553846 C1orf141Q5JVX7 400 aa12.54□□□□□ -0.4
PRKCH-208ENST00000553846 L3MBTL3Q96JM7 780 aaPredicted RBP12.54□□□□□ -0.4
PRKCH-208ENST00000553846 WBP1LQ9NX94 342 aa12.54□□□□□ -0.4
PRKCH-208ENST00000553846 H0YIN7 160 aa12.53□□□□□ -0.4
PRKCH-208ENST00000553846 IL13P35225 146 aa12.53□□□□□ -0.4
PRKCH-208ENST00000553846 CTCFP49711 727 aaPredicted RBP12.53□□□□□ -0.4
PRKCH-208ENST00000553846 VEGFBP49765 207 aa12.53□□□□□ -0.4
PRKCH-208ENST00000553846 EIF5P55010 431 aaKnown RBP12.53□□□□□ -0.4
PRKCH-208ENST00000553846 ERFEQ4G0M1 354 aa12.53□□□□□ -0.4
PRKCH-208ENST00000553846 LGR6Q9HBX8 967 aa12.53□□□□□ -0.4
PRKCH-208ENST00000553846 C21orf2O43822 256 aa12.52□□□□□ -0.41
PRKCH-208ENST00000553846 DDNO94850 711 aaPredicted RBP12.52□□□□□ -0.41
PRKCH-208ENST00000553846 SLC39A6Q13433 755 aa12.52□□□□□ -0.41
PRKCH-208ENST00000553846 AKAP4Q5JQC9 854 aa12.52□□□□□ -0.41
PRKCH-208ENST00000553846 SULT6B1Q6IMI4 303 aa12.52□□□□□ -0.41
PRKCH-208ENST00000553846 PRR5LQ6MZQ0 368 aa12.52□□□□□ -0.41
PRKCH-208ENST00000553846 DPY19L2Q6NUT2 758 aa12.52□□□□□ -0.41
PRKCH-208ENST00000553846 VSIG10Q8N0Z9 540 aa12.52□□□□□ -0.41
PRKCH-208ENST00000553846 BRIP1Q9BX63 1249 aa12.52□□□□□ -0.41
PRKCH-208ENST00000553846 SNED1Q8TER0 1413 aa12.52□□□□□ -0.41
PRKCH-208ENST00000553846 TBC1D9BQ66K14 1250 aa12.51□□□□□ -0.41
PRKCH-208ENST00000553846 LDHDQ86WU2 507 aa12.51□□□□□ -0.41
PRKCH-208ENST00000553846 C7orf43Q8WVR3 580 aa12.51□□□□□ -0.41
PRKCH-208ENST00000553846 TAF1DQ9H5J8 278 aaPredicted RBP12.51□□□□□ -0.41
PRKCH-208ENST00000553846 RASSF10A6NK89 507 aa12.5□□□□□ -0.41
PRKCH-208ENST00000553846 RNMTO43148 476 aaKnown RBP12.5□□□□□ -0.41
PRKCH-208ENST00000553846 HSPA8P11142 646 aaKnown RBP12.5□□□□□ -0.41
PRKCH-208ENST00000553846 ABHD8Q96I13 439 aa12.5□□□□□ -0.41
PRKCH-208ENST00000553846 TAOK3Q9H2K8 898 aa12.5□□□□□ -0.41
PRKCH-208ENST00000553846 PDZRN3Q9UPQ7 1066 aa12.5□□□□□ -0.41
PRKCH-208ENST00000553846 LTBP1Q14766 1721 aa12.49□□□□□ -0.41
PRKCH-208ENST00000553846 LBX1P52954 281 aa12.49□□□□□ -0.41
PRKCH-208ENST00000553846 FAM161AQ3B820 660 aa12.49□□□□□ -0.41
PRKCH-208ENST00000553846 ZNF541Q9H0D2 1346 aa12.48□□□□□ -0.41
PRKCH-208ENST00000553846 TMEM88BA6NKF7 163 aa12.48□□□□□ -0.41
PRKCH-208ENST00000553846 SRGNP10124 158 aa12.48□□□□□ -0.41
PRKCH-208ENST00000553846 PDE6BP35913 854 aa12.48□□□□□ -0.41
PRKCH-208ENST00000553846 RGS19P49795 217 aa12.48□□□□□ -0.41
PRKCH-208ENST00000553846 STYK1Q6J9G0 422 aa12.48□□□□□ -0.41
PRKCH-208ENST00000553846 PRPF40BQ6NWY9 871 aaKnown RBP12.48□□□□□ -0.41
PRKCH-208ENST00000553846 COL4A5P29400 1685 aa12.48□□□□□ -0.41
PRKCH-208ENST00000553846 IQCA1LA6NCM1 817 aa12.47□□□□□ -0.41
PRKCH-208ENST00000553846 CCDC24Q8N4L8 307 aa12.47□□□□□ -0.41
PRKCH-208ENST00000553846 ZNF219Q9P2Y4 722 aaPredicted RBP12.47□□□□□ -0.41
PRKCH-208ENST00000553846 CAMTA2O94983 1202 aa12.46□□□□□ -0.41
PRKCH-208ENST00000553846 CANXP27824 592 aaKnown RBP12.46□□□□□ -0.41
PRKCH-208ENST00000553846 BICDL1Q6ZP65 573 aa12.46□□□□□ -0.41
PRKCH-208ENST00000553846 ZNF622Q969S3 477 aaKnown RBP eCLIP12.46□□□□□ -0.41
PRKCH-208ENST00000553846 HEG1Q9ULI3 1381 aa12.45□□□□□ -0.42
PRKCH-208ENST00000553846 KLRG2A4D1S0 409 aaPredicted RBP12.45□□□□□ -0.42
PRKCH-208ENST00000553846 AIDAQ96BJ3 306 aa12.45□□□□□ -0.42
PRKCH-208ENST00000553846 PANK3Q9H999 370 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms