RNA–Protein interactions for RNA: ENST00000553718.1

TTC8-208, Transcript of tetratricopeptide repeat domain 8, humanhuman

TSL 3

Gene TTC8, Length 479 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC8-208ENST00000553718 COL18A1P39060 1754 aa13.2□□□□□ -0.3
TTC8-208ENST00000553718 PNMA6EA0A0J9YXQ4 647 aa13.2□□□□□ -0.3
TTC8-208ENST00000553718 DDX11L8A8MPP1 907 aa13.2□□□□□ -0.3
TTC8-208ENST00000553718 EIF2S2P20042 333 aaKnown RBP13.2□□□□□ -0.3
TTC8-208ENST00000553718 MCM4P33991 863 aa13.2□□□□□ -0.3
TTC8-208ENST00000553718 MCM2P49736 904 aa13.2□□□□□ -0.3
TTC8-208ENST00000553718 ANAPC15P60006 121 aa13.2□□□□□ -0.3
TTC8-208ENST00000553718 CLEC17AQ6ZS10 378 aa13.2□□□□□ -0.3
TTC8-208ENST00000553718 CHPF2Q9P2E5 772 aa13.2□□□□□ -0.3
TTC8-208ENST00000553718 USP42Q9H9J4 1324 aaKnown RBP13.19□□□□□ -0.3
TTC8-208ENST00000553718 PI4KAP2A4QPH2 592 aa13.19□□□□□ -0.3
TTC8-208ENST00000553718 SMARCA5O60264 1052 aaPredicted RBP13.19□□□□□ -0.3
TTC8-208ENST00000553718 PHKG2P15735 406 aa13.19□□□□□ -0.3
TTC8-208ENST00000553718 LMOD2Q6P5Q4 547 aa13.19□□□□□ -0.3
TTC8-208ENST00000553718 ERC1Q8IUD2 1116 aa13.19□□□□□ -0.3
TTC8-208ENST00000553718 PI4KAP1Q8N8J0 262 aa13.19□□□□□ -0.3
TTC8-208ENST00000553718 LINS1Q8NG48 757 aa13.19□□□□□ -0.3
TTC8-208ENST00000553718 DCAF5Q96JK2 942 aa13.19□□□□□ -0.3
TTC8-208ENST00000553718 SLC52A2Q9HAB3 445 aa13.19□□□□□ -0.3
TTC8-208ENST00000553718 CWC22Q9HCG8 908 aaKnown RBP13.19□□□□□ -0.3
TTC8-208ENST00000553718 MRC1P22897 1456 aa13.18□□□□□ -0.3
TTC8-208ENST00000553718 PXDNQ92626 1479 aa13.18□□□□□ -0.3
TTC8-208ENST00000553718 ZBTB7CA1YPR0 619 aa13.18□□□□□ -0.3
TTC8-208ENST00000553718 KCNQ3O43525 872 aa13.18□□□□□ -0.3
TTC8-208ENST00000553718 ST18O60284 1047 aa13.18□□□□□ -0.3
TTC8-208ENST00000553718 MCCP23508 829 aa13.18□□□□□ -0.3
TTC8-208ENST00000553718 RAB3GAP1Q15042 981 aa13.18□□□□□ -0.3
TTC8-208ENST00000553718 PPP1R42Q7Z4L9 355 aa13.18□□□□□ -0.3
TTC8-208ENST00000553718 OTUD7AQ8TE49 926 aaPredicted RBP13.18□□□□□ -0.3
TTC8-208ENST00000553718 NECTIN2Q92692 538 aa13.18□□□□□ -0.3
TTC8-208ENST00000553718 EXOC6BQ9Y2D4 811 aa13.18□□□□□ -0.3
TTC8-208ENST00000553718 ADCY9O60503 1353 aa13.18□□□□□ -0.3
TTC8-208ENST00000553718 TTC41PQ6P2S7 1318 aa13.17□□□□□ -0.3
TTC8-208ENST00000553718 XPCQ01831 940 aaPredicted RBP13.17□□□□□ -0.3
TTC8-208ENST00000553718 SKOR2Q2VWA4 1001 aaPredicted RBP13.17□□□□□ -0.3
TTC8-208ENST00000553718 ZNF790Q6PG37 636 aa13.17□□□□□ -0.3
TTC8-208ENST00000553718 RHPN1Q8TCX5 695 aa13.17□□□□□ -0.3
TTC8-208ENST00000553718 GBP4Q96PP9 640 aa13.17□□□□□ -0.3
TTC8-208ENST00000553718 ISY1Q9ULR0 285 aaKnown RBP13.17□□□□□ -0.3
TTC8-208ENST00000553718 ERBB4Q15303 1308 aa13.16□□□□□ -0.3
TTC8-208ENST00000553718 SURF6O75683 361 aaKnown RBP13.16□□□□□ -0.3
TTC8-208ENST00000553718 ZC3H6P61129 1189 aaKnown RBP13.16□□□□□ -0.3
TTC8-208ENST00000553718 NUCB2P80303 420 aa13.16□□□□□ -0.3
TTC8-208ENST00000553718 LARP1Q6PKG0 1096 aaKnown RBP13.16□□□□□ -0.3
TTC8-208ENST00000553718 ESYT1Q9BSJ8 1104 aa13.16□□□□□ -0.3
TTC8-208ENST00000553718 SCN11AQ9UI33 1791 aa13.16□□□□□ -0.3
TTC8-208ENST00000553718 COL15A1P39059 1388 aa13.16□□□□□ -0.3
TTC8-208ENST00000553718 CRYBG1Q9Y4K1 1723 aa13.16□□□□□ -0.3
TTC8-208ENST00000553718 STRCP1A6NGW2 1772 aa13.15□□□□□ -0.3
TTC8-208ENST00000553718 CHMLP26374 656 aa13.15□□□□□ -0.3
TTC8-208ENST00000553718 NLRP2Q9NX02 1062 aa13.15□□□□□ -0.3
TTC8-208ENST00000553718 MAP3K2Q9Y2U5 619 aa13.15□□□□□ -0.3
TTC8-208ENST00000553718 TUBGCP6Q96RT7 1819 aa13.14□□□□□ -0.31
TTC8-208ENST00000553718 SRGAP3O43295 1099 aa13.14□□□□□ -0.31
TTC8-208ENST00000553718 SNRPA1P09661 255 aaKnown RBP13.14□□□□□ -0.31
TTC8-208ENST00000553718 NBPF7P0C2Y1 421 aaPredicted RBP13.14□□□□□ -0.31
TTC8-208ENST00000553718 PDIA6Q15084 440 aa13.14□□□□□ -0.31
TTC8-208ENST00000553718 L1TD1Q5T7N2 865 aaKnown RBP13.14□□□□□ -0.31
TTC8-208ENST00000553718 C9orf78Q9NZ63 289 aaPredicted RBP13.14□□□□□ -0.31
TTC8-208ENST00000553718 SOS2Q07890 1332 aaPredicted RBP13.13□□□□□ -0.31
TTC8-208ENST00000553718 KDM6AO15550 1401 aaPredicted RBP13.13□□□□□ -0.31
TTC8-208ENST00000553718 PKD1L3Q7Z443 1732 aa13.13□□□□□ -0.31
TTC8-208ENST00000553718 HSP90AA1P07900 732 aaKnown RBP13.13□□□□□ -0.31
TTC8-208ENST00000553718 CNTROBQ8N137 903 aa13.13□□□□□ -0.31
TTC8-208ENST00000553718 RGPD5Q99666 1765 aa13.12□□□□□ -0.31
TTC8-208ENST00000553718 APBB1O00213 710 aa13.12□□□□□ -0.31
TTC8-208ENST00000553718 GRM8O00222 908 aa13.12□□□□□ -0.31
TTC8-208ENST00000553718 GLRX3O76003 335 aaKnown RBP13.12□□□□□ -0.31
TTC8-208ENST00000553718 CSB-PGBD3P0DP91 1061 aa13.12□□□□□ -0.31
TTC8-208ENST00000553718 NEXNQ0ZGT2 675 aa13.12□□□□□ -0.31
TTC8-208ENST00000553718 NKX1-1Q15270 411 aaPredicted RBP13.12□□□□□ -0.31
TTC8-208ENST00000553718 CLASRPQ8N2M8 674 aaKnown RBP13.12□□□□□ -0.31
TTC8-208ENST00000553718 FMNL2Q96PY5 1086 aa13.12□□□□□ -0.31
TTC8-208ENST00000553718 METTL22Q9BUU2 404 aaPredicted RBP13.12□□□□□ -0.31
TTC8-208ENST00000553718 PARP4Q9UKK3 1724 aaKnown RBP13.11□□□□□ -0.31
TTC8-208ENST00000553718 ERVV-2B6SEH9 535 aa13.11□□□□□ -0.31
TTC8-208ENST00000553718 TTC5Q8N0Z6 440 aa13.11□□□□□ -0.31
TTC8-208ENST00000553718 PI4K2BQ8TCG2 481 aa13.11□□□□□ -0.31
TTC8-208ENST00000553718 GPATCH3Q96I76 525 aa13.11□□□□□ -0.31
TTC8-208ENST00000553718 MEGF6O75095 1541 aa13.1□□□□□ -0.31
TTC8-208ENST00000553718 GOLGA6L22H0YM25 854 aa13.1□□□□□ -0.31
TTC8-208ENST00000553718 TRAK2O60296 914 aa13.1□□□□□ -0.31
TTC8-208ENST00000553718 BRINP3Q76B58 766 aa13.1□□□□□ -0.31
TTC8-208ENST00000553718 TICAM2Q86XR7 235 aa13.1□□□□□ -0.31
TTC8-208ENST00000553718 RUFY2Q8WXA3 655 aa13.1□□□□□ -0.31
TTC8-208ENST00000553718 TNPO1Q92973 898 aaKnown RBP13.1□□□□□ -0.31
TTC8-208ENST00000553718 INTS4Q96HW7 963 aaKnown RBP13.1□□□□□ -0.31
TTC8-208ENST00000553718 WDR17Q8IZU2 1322 aa13.1□□□□□ -0.31
TTC8-208ENST00000553718 TRIM6-TRIM34B2RNG4 842 aa13.09□□□□□ -0.31
TTC8-208ENST00000553718 HIP1O00291 1037 aa13.09□□□□□ -0.31
TTC8-208ENST00000553718 CYP27B1O15528 508 aa13.09□□□□□ -0.31
TTC8-208ENST00000553718 CD2BP2O95400 341 aaKnown RBP13.09□□□□□ -0.31
TTC8-208ENST00000553718 LRP10Q7Z4F1 713 aa13.09□□□□□ -0.31
TTC8-208ENST00000553718 RIC3Q7Z5B4 369 aa13.09□□□□□ -0.31
TTC8-208ENST00000553718 NFATC2IPQ8NCF5 419 aa13.09□□□□□ -0.31
TTC8-208ENST00000553718 RILPL2Q969X0 211 aa13.09□□□□□ -0.31
TTC8-208ENST00000553718 RBM42Q9BTD8 480 aaKnown RBP13.09□□□□□ -0.31
TTC8-208ENST00000553718 CYP2E1P05181 493 aaPredicted RBP13.08□□□□□ -0.32
TTC8-208ENST00000553718 HSPA4P34932 840 aa13.08□□□□□ -0.32
TTC8-208ENST00000553718 CABP4P57796 275 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms