RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 BACH1O14867 736 aa8.66□□□□□ -1.02
SCFD1-210ENST00000553693 ATP9BO43861 1147 aa8.66□□□□□ -1.02
SCFD1-210ENST00000553693 COL8A1P27658 744 aa8.66□□□□□ -1.02
SCFD1-210ENST00000553693 LBRQ14739 615 aaKnown RBP8.66□□□□□ -1.02
SCFD1-210ENST00000553693 TBC1D9Q6ZT07 1266 aa8.66□□□□□ -1.02
SCFD1-210ENST00000553693 DEPDC4Q8N2C3 294 aa8.66□□□□□ -1.02
SCFD1-210ENST00000553693 GLMNQ92990 594 aa8.66□□□□□ -1.02
SCFD1-210ENST00000553693 GTPBP3Q969Y2 492 aaKnown RBP8.66□□□□□ -1.02
SCFD1-210ENST00000553693 SLC4A9Q96Q91 983 aa8.66□□□□□ -1.02
SCFD1-210ENST00000553693 UCN2Q96RP3 112 aa8.66□□□□□ -1.02
SCFD1-210ENST00000553693 NIFKQ9BYG3 293 aaKnown RBP8.66□□□□□ -1.02
SCFD1-210ENST00000553693 GPAMQ9HCL2 828 aa8.66□□□□□ -1.02
SCFD1-210ENST00000553693 SERTAD1Q9UHV2 236 aa8.66□□□□□ -1.02
SCFD1-210ENST00000553693 GPR25O00155 361 aa8.65□□□□□ -1.02
SCFD1-210ENST00000553693 PLA2G4AP47712 749 aa8.65□□□□□ -1.02
SCFD1-210ENST00000553693 ATP1A2P50993 1020 aa8.65□□□□□ -1.02
SCFD1-210ENST00000553693 BTBD11A6QL63 1104 aa8.64□□□□□ -1.03
SCFD1-210ENST00000553693 MTFR1Q15390 333 aa8.64□□□□□ -1.03
SCFD1-210ENST00000553693 C1orf216Q8TAB5 229 aa8.64□□□□□ -1.03
SCFD1-210ENST00000553693 LRRC4BQ9NT99 713 aa8.64□□□□□ -1.03
SCFD1-210ENST00000553693 A6NJY4 79 aa8.63□□□□□ -1.03
SCFD1-210ENST00000553693 CDK2AP1O14519 115 aa8.63□□□□□ -1.03
SCFD1-210ENST00000553693 MSX1P28360 303 aa8.63□□□□□ -1.03
SCFD1-210ENST00000553693 EFHC2Q5JST6 749 aa8.63□□□□□ -1.03
SCFD1-210ENST00000553693 KRTAP19-1Q8IUB9 90 aa8.63□□□□□ -1.03
SCFD1-210ENST00000553693 NSFL1CQ9UNZ2 370 aaKnown RBP8.63□□□□□ -1.03
SCFD1-210ENST00000553693 NBPF1Q3BBV0 1214 aa8.62□□□□□ -1.03
SCFD1-210ENST00000553693 RUBCNLQ9H714 662 aa8.62□□□□□ -1.03
SCFD1-210ENST00000553693 ZNF358Q9NW07 568 aa8.62□□□□□ -1.03
SCFD1-210ENST00000553693 PHF24Q9UPV7 400 aa8.62□□□□□ -1.03
SCFD1-210ENST00000553693 OIP5O43482 229 aa8.61□□□□□ -1.03
SCFD1-210ENST00000553693 CALR3Q96L12 384 aaKnown RBP8.61□□□□□ -1.03
SCFD1-210ENST00000553693 ALYREFQ86V81 257 aaKnown RBP8.6□□□□□ -1.03
SCFD1-210ENST00000553693 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.6□□□□□ -1.03
SCFD1-210ENST00000553693 TPCN2Q8NHX9 752 aa8.6□□□□□ -1.03
SCFD1-210ENST00000553693 CFHR5Q9BXR6 569 aa8.6□□□□□ -1.03
SCFD1-210ENST00000553693 CRISPLD1Q9H336 500 aa8.6□□□□□ -1.03
SCFD1-210ENST00000553693 DNAAF2Q9NVR5 837 aaKnown RBP8.6□□□□□ -1.03
SCFD1-210ENST00000553693 IQSEC3Q9UPP2 1182 aaPredicted RBP8.6□□□□□ -1.03
SCFD1-210ENST00000553693 RBM19Q9Y4C8 960 aaKnown RBP8.6□□□□□ -1.03
SCFD1-210ENST00000553693 PALM3A6NDB9 673 aaPredicted RBP8.59□□□□□ -1.03
SCFD1-210ENST00000553693 TATP17735 454 aaPredicted RBP8.59□□□□□ -1.03
SCFD1-210ENST00000553693 MX2P20592 715 aa8.59□□□□□ -1.03
SCFD1-210ENST00000553693 LARGE2Q8N3Y3 721 aa8.59□□□□□ -1.03
SCFD1-210ENST00000553693 AIDAQ96BJ3 306 aa8.59□□□□□ -1.03
SCFD1-210ENST00000553693 ZDHHC3Q9NYG2 299 aa8.59□□□□□ -1.03
SCFD1-210ENST00000553693 SCHIP1Q9P0W5 487 aaPredicted RBP8.59□□□□□ -1.03
SCFD1-210ENST00000553693 MKRN1Q9UHC7 482 aaKnown RBP8.59□□□□□ -1.03
SCFD1-210ENST00000553693 ATP4AP20648 1035 aa8.58□□□□□ -1.04
SCFD1-210ENST00000553693 CLDN10P78369 228 aa8.58□□□□□ -1.04
SCFD1-210ENST00000553693 ZMYM1Q5SVZ6 1142 aa8.58□□□□□ -1.04
SCFD1-210ENST00000553693 CCDC102BQ68D86 513 aa8.58□□□□□ -1.04
SCFD1-210ENST00000553693 FIGNL1Q6PIW4 674 aa8.58□□□□□ -1.04
SCFD1-210ENST00000553693 ZNF295-AS1Q8N0V1 137 aa8.58□□□□□ -1.04
SCFD1-210ENST00000553693 OGFOD1Q8N543 542 aa8.58□□□□□ -1.04
SCFD1-210ENST00000553693 CABP1Q9NZU7 370 aa8.58□□□□□ -1.04
SCFD1-210ENST00000553693 MAFBQ9Y5Q3 323 aaPredicted RBP8.58□□□□□ -1.04
SCFD1-210ENST00000553693 THBS1P07996 1170 aa8.57□□□□□ -1.04
SCFD1-210ENST00000553693 MAP2K3P46734 347 aa8.57□□□□□ -1.04
SCFD1-210ENST00000553693 NLRP8Q86W28 1048 aa8.57□□□□□ -1.04
SCFD1-210ENST00000553693 TFIP11Q9UBB9 837 aaKnown RBP8.57□□□□□ -1.04
SCFD1-210ENST00000553693 ATXN7L1Q9ULK2 861 aaPredicted RBP8.57□□□□□ -1.04
SCFD1-210ENST00000553693 C1QTNF9BB2RNN3 333 aa8.56□□□□□ -1.04
SCFD1-210ENST00000553693 SHISA8B8ZZ34 492 aa8.56□□□□□ -1.04
SCFD1-210ENST00000553693 M0R2N6 131 aa8.56□□□□□ -1.04
SCFD1-210ENST00000553693 EPHA4P54764 986 aa8.56□□□□□ -1.04
SCFD1-210ENST00000553693 SIX5Q8N196 739 aa8.56□□□□□ -1.04
SCFD1-210ENST00000553693 PPP1R12CQ9BZL4 782 aa8.56□□□□□ -1.04
SCFD1-210ENST00000553693 MKL2Q9ULH7 1088 aa8.56□□□□□ -1.04
SCFD1-210ENST00000553693 KIAA1024Q9UPX6 916 aa8.56□□□□□ -1.04
SCFD1-210ENST00000553693 USP3Q9Y6I4 520 aa8.56□□□□□ -1.04
SCFD1-210ENST00000553693 UBAP2LQ14157 1087 aaKnown RBP8.55□□□□□ -1.04
SCFD1-210ENST00000553693 ARSJQ5FYB0 599 aaPredicted RBP8.55□□□□□ -1.04
SCFD1-210ENST00000553693 SLC9A9Q8IVB4 645 aa8.55□□□□□ -1.04
SCFD1-210ENST00000553693 ZNF594Q96JF6 807 aaPredicted RBP8.55□□□□□ -1.04
SCFD1-210ENST00000553693 SEMA6BQ9H3T3 888 aa8.55□□□□□ -1.04
SCFD1-210ENST00000553693 ZBTB7BO15156 539 aaPredicted RBP8.54□□□□□ -1.04
SCFD1-210ENST00000553693 RASA1P20936 1047 aa8.54□□□□□ -1.04
SCFD1-210ENST00000553693 TEAD4Q15561 434 aa8.54□□□□□ -1.04
SCFD1-210ENST00000553693 CD163Q86VB7 1156 aa8.54□□□□□ -1.04
SCFD1-210ENST00000553693 TNS4Q8IZW8 715 aa8.54□□□□□ -1.04
SCFD1-210ENST00000553693 CHMP3Q9Y3E7 222 aa8.54□□□□□ -1.04
SCFD1-210ENST00000553693 FOXD4L6Q3SYB3 417 aaPredicted RBP8.53□□□□□ -1.04
SCFD1-210ENST00000553693 LARP1Q6PKG0 1096 aaKnown RBP8.53□□□□□ -1.04
SCFD1-210ENST00000553693 FOXD4L3Q6VB84 417 aaPredicted RBP8.53□□□□□ -1.04
SCFD1-210ENST00000553693 ABHD17AQ96GS6 310 aa8.53□□□□□ -1.04
SCFD1-210ENST00000553693 SUV39H2Q9H5I1 410 aa8.53□□□□□ -1.04
SCFD1-210ENST00000553693 ZNF232Q9UNY5 417 aa8.53□□□□□ -1.04
SCFD1-210ENST00000553693 PCDHGC4Q9Y5F7 938 aa8.53□□□□□ -1.04
SCFD1-210ENST00000553693 GJA3Q9Y6H8 435 aa8.53□□□□□ -1.04
SCFD1-210ENST00000553693 A0A1W2PNR3 127 aa8.52□□□□□ -1.05
SCFD1-210ENST00000553693 HOXB4P17483 251 aaPredicted RBP8.52□□□□□ -1.05
SCFD1-210ENST00000553693 FGFR3P22607 806 aa8.52□□□□□ -1.05
SCFD1-210ENST00000553693 BICDL1Q6ZP65 573 aa8.52□□□□□ -1.05
SCFD1-210ENST00000553693 C1orf229Q6ZS94 237 aaPredicted RBP8.52□□□□□ -1.05
SCFD1-210ENST00000553693 ZDHHC1Q8WTX9 485 aa8.52□□□□□ -1.05
SCFD1-210ENST00000553693 L3MBTL2Q969R5 705 aa8.52□□□□□ -1.05
SCFD1-210ENST00000553693 NDFIP2Q9NV92 336 aa8.52□□□□□ -1.05
SCFD1-210ENST00000553693 GPC6Q9Y625 555 aaPredicted RBP8.52□□□□□ -1.05
SCFD1-210ENST00000553693 SERTM1A2A2V5 107 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 301.2 ms