RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 MEN1O00255 615 aa9.98□□□□□ -0.81
ATXN3-223ENST00000553686 PIK3CDO00329 1044 aa9.98□□□□□ -0.81
ATXN3-223ENST00000553686 TERTO14746 1132 aaKnown RBP9.98□□□□□ -0.81
ATXN3-223ENST00000553686 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.98□□□□□ -0.81
ATXN3-223ENST00000553686 MAP7D1Q3KQU3 841 aa9.98□□□□□ -0.81
ATXN3-223ENST00000553686 CYP2U1Q7Z449 544 aa9.98□□□□□ -0.81
ATXN3-223ENST00000553686 PLPP7Q8NBV4 271 aa9.98□□□□□ -0.81
ATXN3-223ENST00000553686 TREML4Q6UXN2 200 aa9.97□□□□□ -0.81
ATXN3-223ENST00000553686 ADAMTS19Q8TE59 1207 aa9.97□□□□□ -0.81
ATXN3-223ENST00000553686 SIRT1Q96EB6 747 aa9.97□□□□□ -0.81
ATXN3-223ENST00000553686 GTF3C3Q9Y5Q9 886 aa9.97□□□□□ -0.81
ATXN3-223ENST00000553686 SKIP12755 728 aa9.96□□□□□ -0.82
ATXN3-223ENST00000553686 EFCAB2Q5VUJ9 269 aa9.96□□□□□ -0.82
ATXN3-223ENST00000553686 NLRP3Q96P20 1036 aa9.96□□□□□ -0.82
ATXN3-223ENST00000553686 RGS17Q9UGC6 210 aaPredicted RBP9.96□□□□□ -0.82
ATXN3-223ENST00000553686 WFS1O76024 890 aa9.95□□□□□ -0.82
ATXN3-223ENST00000553686 GNRH1P01148 92 aa9.95□□□□□ -0.82
ATXN3-223ENST00000553686 VEGFBP49765 207 aa9.95□□□□□ -0.82
ATXN3-223ENST00000553686 SETD1BQ9UPS6 1966 aaKnown RBP9.95□□□□□ -0.82
ATXN3-223ENST00000553686 PTPRKQ15262 1439 aa9.94□□□□□ -0.82
ATXN3-223ENST00000553686 RNF144AP50876 292 aaPredicted RBP9.94□□□□□ -0.82
ATXN3-223ENST00000553686 NFX1Q12986 1120 aaKnown RBP9.94□□□□□ -0.82
ATXN3-223ENST00000553686 FOXD4L5Q5VV16 416 aaPredicted RBP9.94□□□□□ -0.82
ATXN3-223ENST00000553686 RNF217Q8TC41 542 aa9.94□□□□□ -0.82
ATXN3-223ENST00000553686 ARHGEF10LQ9HCE6 1279 aa9.94□□□□□ -0.82
ATXN3-223ENST00000553686 CLN3Q13286 438 aa9.93□□□□□ -0.82
ATXN3-223ENST00000553686 PRICKLE2Q7Z3G6 844 aa9.93□□□□□ -0.82
ATXN3-223ENST00000553686 NFATC2IPQ8NCF5 419 aa9.93□□□□□ -0.82
ATXN3-223ENST00000553686 SLC16A10Q8TF71 515 aa9.93□□□□□ -0.82
ATXN3-223ENST00000553686 RAB6BQ9NRW1 208 aa9.93□□□□□ -0.82
ATXN3-223ENST00000553686 FER1L4A9Z1Z3 1794 aa9.93□□□□□ -0.82
ATXN3-223ENST00000553686 CNTLNQ9NXG0 1405 aa9.92□□□□□ -0.82
ATXN3-223ENST00000553686 PTSQ03393 145 aa9.92□□□□□ -0.82
ATXN3-223ENST00000553686 LYSMD3Q7Z3D4 306 aa9.92□□□□□ -0.82
ATXN3-223ENST00000553686 NPAS3Q8IXF0 933 aa9.92□□□□□ -0.82
ATXN3-223ENST00000553686 GPC1P35052 558 aa9.91□□□□□ -0.82
ATXN3-223ENST00000553686 AFAP1Q8N556 730 aa9.91□□□□□ -0.82
ATXN3-223ENST00000553686 CNKSR1Q969H4 720 aa9.91□□□□□ -0.82
ATXN3-223ENST00000553686 HECW1Q76N89 1606 aa9.91□□□□□ -0.82
ATXN3-223ENST00000553686 NPATQ14207 1427 aa9.9□□□□□ -0.82
ATXN3-223ENST00000553686 LZTS3O60299 673 aaPredicted RBP9.9□□□□□ -0.82
ATXN3-223ENST00000553686 PPFIA3O75145 1194 aa9.9□□□□□ -0.82
ATXN3-223ENST00000553686 EML3Q32P44 896 aa9.9□□□□□ -0.82
ATXN3-223ENST00000553686 SLC27A3Q5K4L6 730 aa9.9□□□□□ -0.82
ATXN3-223ENST00000553686 POTEAQ6S8J7 498 aa9.9□□□□□ -0.82
ATXN3-223ENST00000553686 TBC1D9Q6ZT07 1266 aa9.9□□□□□ -0.82
ATXN3-223ENST00000553686 GLMNQ92990 594 aa9.9□□□□□ -0.82
ATXN3-223ENST00000553686 XAGE2Q96GT9 111 aa9.9□□□□□ -0.82
ATXN3-223ENST00000553686 ESYT1Q9BSJ8 1104 aa9.9□□□□□ -0.82
ATXN3-223ENST00000553686 GRIP2Q9C0E4 1043 aa9.9□□□□□ -0.82
ATXN3-223ENST00000553686 RICTORQ6R327 1708 aa9.9□□□□□ -0.83
ATXN3-223ENST00000553686 PLCH2O75038 1416 aa9.9□□□□□ -0.83
ATXN3-223ENST00000553686 CAMSAP1Q5T5Y3 1602 aa9.89□□□□□ -0.83
ATXN3-223ENST00000553686 CFAP74Q9C0B2 1584 aa9.89□□□□□ -0.83
ATXN3-223ENST00000553686 H3BM21 787 aa9.89□□□□□ -0.83
ATXN3-223ENST00000553686 STAU1O95793 577 aaKnown RBP9.89□□□□□ -0.83
ATXN3-223ENST00000553686 IL2RAP01589 272 aa9.89□□□□□ -0.83
ATXN3-223ENST00000553686 CENPCQ03188 943 aa9.89□□□□□ -0.83
ATXN3-223ENST00000553686 LCE2AQ5TA79 106 aaPredicted RBP9.89□□□□□ -0.83
ATXN3-223ENST00000553686 DEPDC4Q8N2C3 294 aa9.89□□□□□ -0.83
ATXN3-223ENST00000553686 CALR3Q96L12 384 aaKnown RBP9.89□□□□□ -0.83
ATXN3-223ENST00000553686 ZNF777Q9ULD5 760 aaPredicted RBP9.89□□□□□ -0.83
ATXN3-223ENST00000553686 PLA2R1Q13018 1463 aa9.89□□□□□ -0.83
ATXN3-223ENST00000553686 RHOQP17081 205 aa9.88□□□□□ -0.83
ATXN3-223ENST00000553686 ESCO1Q5FWF5 840 aa9.88□□□□□ -0.83
ATXN3-223ENST00000553686 UCN2Q96RP3 112 aa9.88□□□□□ -0.83
ATXN3-223ENST00000553686 NOD1Q9Y239 953 aa9.88□□□□□ -0.83
ATXN3-223ENST00000553686 ZMYM3Q14202 1370 aa9.88□□□□□ -0.83
ATXN3-223ENST00000553686 SLC35F4A4IF30 521 aa9.87□□□□□ -0.83
ATXN3-223ENST00000553686 USP17L5A8MUK1 530 aa9.87□□□□□ -0.83
ATXN3-223ENST00000553686 POU4F2Q12837 409 aa9.87□□□□□ -0.83
ATXN3-223ENST00000553686 NCOA4Q13772 614 aa9.87□□□□□ -0.83
ATXN3-223ENST00000553686 CCDC155Q8N6L0 562 aa9.87□□□□□ -0.83
ATXN3-223ENST00000553686 CPS1P31327 1500 aa9.87□□□□□ -0.83
ATXN3-223ENST00000553686 IRF7Q92985 503 aa9.86□□□□□ -0.83
ATXN3-223ENST00000553686 ZMYND15Q9H091 742 aa9.86□□□□□ -0.83
ATXN3-223ENST00000553686 ETNK1Q9HBU6 452 aa9.86□□□□□ -0.83
ATXN3-223ENST00000553686 TFIP11Q9UBB9 837 aaKnown RBP9.86□□□□□ -0.83
ATXN3-223ENST00000553686 PCDHGA11Q9Y5H2 935 aa9.86□□□□□ -0.83
ATXN3-223ENST00000553686 HRH3Q9Y5N1 445 aa9.86□□□□□ -0.83
ATXN3-223ENST00000553686 TCOF1Q13428 1488 aaKnown RBP9.85□□□□□ -0.83
ATXN3-223ENST00000553686 ZNF518AQ6AHZ1 1483 aa9.85□□□□□ -0.83
ATXN3-223ENST00000553686 SIGLEC1Q9BZZ2 1709 aa9.85□□□□□ -0.83
ATXN3-223ENST00000553686 ATP9BO43861 1147 aa9.85□□□□□ -0.83
ATXN3-223ENST00000553686 LCE2CQ5TA81 110 aa9.85□□□□□ -0.83
ATXN3-223ENST00000553686 NUP153P49790 1475 aaKnown RBP9.85□□□□□ -0.83
ATXN3-223ENST00000553686 AGLP35573 1532 aa9.84□□□□□ -0.83
ATXN3-223ENST00000553686 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.84□□□□□ -0.83
ATXN3-223ENST00000553686 INHAP05111 366 aa9.84□□□□□ -0.83
ATXN3-223ENST00000553686 GDF10P55107 478 aa9.84□□□□□ -0.83
ATXN3-223ENST00000553686 ZSCAN10Q96SZ4 725 aaPredicted RBP9.84□□□□□ -0.83
ATXN3-223ENST00000553686 CDK11AQ9UQ88 783 aaPredicted RBP9.84□□□□□ -0.83
ATXN3-223ENST00000553686 SHANK2Q9UPX8 1470 aa9.84□□□□□ -0.83
ATXN3-223ENST00000553686 SENP3-EIF4A1A0A087X0R7 540 aa9.83□□□□□ -0.84
ATXN3-223ENST00000553686 USP17L3A6NCW0 530 aa9.83□□□□□ -0.84
ATXN3-223ENST00000553686 USP17L4A6NCW7 530 aa9.83□□□□□ -0.84
ATXN3-223ENST00000553686 SCNN1DP51172 638 aa9.83□□□□□ -0.84
ATXN3-223ENST00000553686 GTF2IP78347 998 aa9.83□□□□□ -0.84
ATXN3-223ENST00000553686 USP17L2Q6R6M4 530 aa9.83□□□□□ -0.84
ATXN3-223ENST00000553686 USP17L1Q7RTZ2 530 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms