RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 STK32BQ9NY57 414 aa19.29■□□□□ 0.68
ABCD4-218ENST00000553486 SLC15A2Q16348 729 aa19.28■□□□□ 0.68
ABCD4-218ENST00000553486 DDRGK1Q96HY6 314 aa19.28■□□□□ 0.68
ABCD4-218ENST00000553486 SOS1Q07889 1333 aaPredicted RBP19.28■□□□□ 0.68
ABCD4-218ENST00000553486 TAF7Q15545 349 aaPredicted RBP19.28■□□□□ 0.68
ABCD4-218ENST00000553486 ZBTB7AO95365 584 aa19.27■□□□□ 0.68
ABCD4-218ENST00000553486 INTS3Q68E01 1043 aaKnown RBP19.27■□□□□ 0.68
ABCD4-218ENST00000553486 IL17REQ8NFR9 667 aa19.27■□□□□ 0.68
ABCD4-218ENST00000553486 CACNA1FO60840 1977 aa19.27■□□□□ 0.67
ABCD4-218ENST00000553486 FAM208AQ9UK61 1670 aaKnown RBP19.26■□□□□ 0.67
ABCD4-218ENST00000553486 SLC4A2P04920 1241 aa19.25■□□□□ 0.67
ABCD4-218ENST00000553486 PLEKHO1Q53GL0 409 aaPredicted RBP19.25■□□□□ 0.67
ABCD4-218ENST00000553486 PTGER2P43116 358 aa19.24■□□□□ 0.67
ABCD4-218ENST00000553486 NCAPD2Q15021 1401 aa19.24■□□□□ 0.67
ABCD4-218ENST00000553486 AMOTQ4VCS5 1084 aa19.24■□□□□ 0.67
ABCD4-218ENST00000553486 DDX54Q8TDD1 881 aaKnown RBP19.24■□□□□ 0.67
ABCD4-218ENST00000553486 GCC1Q96CN9 775 aa19.24■□□□□ 0.67
ABCD4-218ENST00000553486 STK31Q9BXU1 1019 aa19.23■□□□□ 0.67
ABCD4-218ENST00000553486 CEMIPQ8WUJ3 1361 aa19.22■□□□□ 0.67
ABCD4-218ENST00000553486 NUCB1Q02818 461 aa19.22■□□□□ 0.67
ABCD4-218ENST00000553486 CCDC30Q5VVM6 783 aa19.22■□□□□ 0.67
ABCD4-218ENST00000553486 ATF5Q9Y2D1 282 aaPredicted RBP19.22■□□□□ 0.67
ABCD4-218ENST00000553486 BTAF1O14981 1849 aa19.22■□□□□ 0.67
ABCD4-218ENST00000553486 PAPPAQ13219 1627 aa19.21■□□□□ 0.67
ABCD4-218ENST00000553486 AKAP4Q5JQC9 854 aa19.21■□□□□ 0.67
ABCD4-218ENST00000553486 MTFR1LQ9H019 292 aa19.21■□□□□ 0.67
ABCD4-218ENST00000553486 C1orf115Q9H7X2 142 aa19.21■□□□□ 0.67
ABCD4-218ENST00000553486 LRRC4BQ9NT99 713 aa19.21■□□□□ 0.67
ABCD4-218ENST00000553486 ZNF530Q6P9A1 599 aaPredicted RBP19.2■□□□□ 0.66
ABCD4-218ENST00000553486 MEGF6O75095 1541 aa19.19■□□□□ 0.66
ABCD4-218ENST00000553486 DCAF8L1A6NGE4 600 aa19.19■□□□□ 0.66
ABCD4-218ENST00000553486 ZNF827Q17R98 1081 aa19.18■□□□□ 0.66
ABCD4-218ENST00000553486 CHD1LQ86WJ1 897 aa19.18■□□□□ 0.66
ABCD4-218ENST00000553486 ZCRB1Q8TBF4 217 aaKnown RBP19.18■□□□□ 0.66
ABCD4-218ENST00000553486 YY1P25490 414 aa19.18■□□□□ 0.66
ABCD4-218ENST00000553486 CCT4P50991 539 aaKnown RBP19.18■□□□□ 0.66
ABCD4-218ENST00000553486 SGIP1Q9BQI5 828 aa19.18■□□□□ 0.66
ABCD4-218ENST00000553486 CHMP4AQ9BY43 222 aa19.18■□□□□ 0.66
ABCD4-218ENST00000553486 GOLGB1Q14789 3259 aaKnown RBP19.18■□□□□ 0.66
ABCD4-218ENST00000553486 C1orf141Q5JVX7 400 aa19.17■□□□□ 0.66
ABCD4-218ENST00000553486 SLC27A3Q5K4L6 730 aa19.17■□□□□ 0.66
ABCD4-218ENST00000553486 SYTL4Q96C24 671 aaPredicted RBP19.17■□□□□ 0.66
ABCD4-218ENST00000553486 KDM3BQ7LBC6 1761 aa19.17■□□□□ 0.66
ABCD4-218ENST00000553486 PRIM1P49642 420 aaKnown RBP19.16■□□□□ 0.66
ABCD4-218ENST00000553486 SIRT2Q8IXJ6 389 aa19.16■□□□□ 0.66
ABCD4-218ENST00000553486 TEFQ10587 303 aa19.16■□□□□ 0.66
ABCD4-218ENST00000553486 ANKRD45Q5TZF3 282 aa19.16■□□□□ 0.66
ABCD4-218ENST00000553486 G2E3Q7L622 706 aa19.16■□□□□ 0.66
ABCD4-218ENST00000553486 RPAP2Q8IXW5 612 aaPredicted RBP19.16■□□□□ 0.66
ABCD4-218ENST00000553486 UPF2Q9HAU5 1272 aaKnown RBP19.16■□□□□ 0.66
ABCD4-218ENST00000553486 LGR6Q9HBX8 967 aa19.16■□□□□ 0.66
ABCD4-218ENST00000553486 KAT6BQ8WYB5 2073 aa19.15■□□□□ 0.66
ABCD4-218ENST00000553486 FHDC1Q9C0D6 1143 aaPredicted RBP19.15■□□□□ 0.66
ABCD4-218ENST00000553486 LNPKQ9C0E8 428 aa19.15■□□□□ 0.66
ABCD4-218ENST00000553486 HOXB7P09629 217 aa19.14■□□□□ 0.65
ABCD4-218ENST00000553486 ANKRD44Q8N8A2 993 aa19.14■□□□□ 0.65
ABCD4-218ENST00000553486 AKT1S1Q96B36 256 aa19.14■□□□□ 0.65
ABCD4-218ENST00000553486 FLIIQ13045 1269 aa19.14■□□□□ 0.65
ABCD4-218ENST00000553486 RAPGEF4Q8WZA2 1011 aa19.14■□□□□ 0.65
ABCD4-218ENST00000553486 RNMTO43148 476 aaKnown RBP19.13■□□□□ 0.65
ABCD4-218ENST00000553486 SYT17Q9BSW7 474 aa19.13■□□□□ 0.65
ABCD4-218ENST00000553486 DAXXQ9UER7 740 aaPredicted RBP19.13■□□□□ 0.65
ABCD4-218ENST00000553486 SHANK3Q9BYB0 1731 aa19.13■□□□□ 0.65
ABCD4-218ENST00000553486 SEC24BO95487 1268 aa19.12■□□□□ 0.65
ABCD4-218ENST00000553486 EIF4A1P60842 406 aaKnown RBP19.12■□□□□ 0.65
ABCD4-218ENST00000553486 SLC4A10Q6U841 1118 aa19.12■□□□□ 0.65
ABCD4-218ENST00000553486 MPRIPQ6WCQ1 1025 aa19.12■□□□□ 0.65
ABCD4-218ENST00000553486 DOT1LQ8TEK3 1739 aa19.12■□□□□ 0.65
ABCD4-218ENST00000553486 BTBD11A6QL63 1104 aa19.11■□□□□ 0.65
ABCD4-218ENST00000553486 FKBP5Q13451 457 aaPredicted RBP19.11■□□□□ 0.65
ABCD4-218ENST00000553486 HDGFL1Q5TGJ6 251 aa19.11■□□□□ 0.65
ABCD4-218ENST00000553486 DCTPP1Q9H773 170 aa19.11■□□□□ 0.65
ABCD4-218ENST00000553486 KCNQ4P56696 695 aa19.11■□□□□ 0.65
ABCD4-218ENST00000553486 NECTIN2Q92692 538 aa19.11■□□□□ 0.65
ABCD4-218ENST00000553486 ARXQ96QS3 562 aa19.11■□□□□ 0.65
ABCD4-218ENST00000553486 N4BP2Q86UW6 1770 aaPredicted RBP19.1■□□□□ 0.65
ABCD4-218ENST00000553486 ATP10DQ9P241 1426 aa19.1■□□□□ 0.65
ABCD4-218ENST00000553486 F6X3S4 739 aa19.1■□□□□ 0.65
ABCD4-218ENST00000553486 CEP85Q6P2H3 762 aa19.1■□□□□ 0.65
ABCD4-218ENST00000553486 MEIS3Q99687 375 aa19.1■□□□□ 0.65
ABCD4-218ENST00000553486 TATP17735 454 aaPredicted RBP19.09■□□□□ 0.65
ABCD4-218ENST00000553486 PNPLA7Q6ZV29 1317 aa19.09■□□□□ 0.65
ABCD4-218ENST00000553486 SLC16A10Q8TF71 515 aa19.09■□□□□ 0.65
ABCD4-218ENST00000553486 TFCP2L1Q9NZI6 479 aa19.09■□□□□ 0.65
ABCD4-218ENST00000553486 PXDNLA1KZ92 1463 aa19.08■□□□□ 0.65
ABCD4-218ENST00000553486 HMMRO75330 724 aa19.08■□□□□ 0.64
ABCD4-218ENST00000553486 PCDH11XQ9BZA7 1347 aa19.08■□□□□ 0.64
ABCD4-218ENST00000553486 PCDH11YQ9BZA8 1340 aa19.08■□□□□ 0.64
ABCD4-218ENST00000553486 PLEKHG2Q9H7P9 1386 aa19.08■□□□□ 0.64
ABCD4-218ENST00000553486 SIPA1L3O60292 1781 aaPredicted RBP19.07■□□□□ 0.64
ABCD4-218ENST00000553486 CCNL1Q9UK58 526 aaPredicted RBP19.07■□□□□ 0.64
ABCD4-218ENST00000553486 ADAMTS7Q9UKP4 1686 aa19.07■□□□□ 0.64
ABCD4-218ENST00000553486 GNAI3P08754 354 aa19.07■□□□□ 0.64
ABCD4-218ENST00000553486 BMP2KLQ5H9B9 411 aa19.07■□□□□ 0.64
ABCD4-218ENST00000553486 LY75O60449 1722 aa19.06■□□□□ 0.64
ABCD4-218ENST00000553486 GNAI2P04899 355 aa19.06■□□□□ 0.64
ABCD4-218ENST00000553486 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.06■□□□□ 0.641e-9■■□□□ 13.7
ABCD4-218ENST00000553486 SPG7Q9UQ90 795 aa19.06■□□□□ 0.64
ABCD4-218ENST00000553486 EIF2S2P20042 333 aaKnown RBP19.05■□□□□ 0.64
ABCD4-218ENST00000553486 TBC1D32Q96NH3 1257 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms