RNA–Protein interactions for RNA: ENST00000553065.1

DDX23-217, Transcript of DEAD-box helicase 23, humanhuman

TSL 2

Gene DDX23, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-217ENST00000553065 PRAMEF22A3QJZ6 481 aa14.19□□□□□ -0.14
DDX23-217ENST00000553065 DCTN1Q14203 1278 aa14.19□□□□□ -0.14
DDX23-217ENST00000553065 NFIXQ14938 502 aa14.19□□□□□ -0.14
DDX23-217ENST00000553065 PARP3Q9Y6F1 533 aa14.19□□□□□ -0.14
DDX23-217ENST00000553065 UBR2Q8IWV8 1755 aa14.19□□□□□ -0.14
DDX23-217ENST00000553065 FCHSD2O94868 740 aa14.18□□□□□ -0.14
DDX23-217ENST00000553065 A1BGP04217 495 aa14.18□□□□□ -0.14
DDX23-217ENST00000553065 CANXP27824 592 aaKnown RBP14.18□□□□□ -0.14
DDX23-217ENST00000553065 USP16Q9Y5T5 823 aa14.18□□□□□ -0.14
DDX23-217ENST00000553065 HEG1Q9ULI3 1381 aa14.18□□□□□ -0.14
DDX23-217ENST00000553065 SIPA1L3O60292 1781 aaPredicted RBP14.17□□□□□ -0.14
DDX23-217ENST00000553065 U2AF1L5P0DN76 240 aaPredicted RBP14.17□□□□□ -0.14
DDX23-217ENST00000553065 CHRNA5P30532 468 aa14.17□□□□□ -0.14
DDX23-217ENST00000553065 U2AF1Q01081 240 aaKnown RBP eCLIP14.17□□□□□ -0.14
DDX23-217ENST00000553065 MCM10Q7L590 875 aa14.17□□□□□ -0.14
DDX23-217ENST00000553065 PLEKHF1Q96S99 279 aa14.17□□□□□ -0.14
DDX23-217ENST00000553065 ATP10DQ9P241 1426 aa14.16□□□□□ -0.14
DDX23-217ENST00000553065 TEFQ10587 303 aa14.16□□□□□ -0.14
DDX23-217ENST00000553065 CFAP53Q96M91 514 aa14.16□□□□□ -0.14
DDX23-217ENST00000553065 BCS1LQ9Y276 419 aa14.16□□□□□ -0.14
DDX23-217ENST00000553065 COL15A1P39059 1388 aa14.15□□□□□ -0.14
DDX23-217ENST00000553065 BTBD11A6QL63 1104 aa14.14□□□□□ -0.15
DDX23-217ENST00000553065 ZPR1O75312 459 aa14.14□□□□□ -0.15
DDX23-217ENST00000553065 MIS18AQ9NYP9 233 aa14.14□□□□□ -0.15
DDX23-217ENST00000553065 NUDCQ9Y266 331 aa14.14□□□□□ -0.15
DDX23-217ENST00000553065 BRCA1P38398 1863 aaKnown RBP14.14□□□□□ -0.15
DDX23-217ENST00000553065 STARD3NLO95772 234 aa14.13□□□□□ -0.15
DDX23-217ENST00000553065 SERPINB2P05120 415 aa14.13□□□□□ -0.15
DDX23-217ENST00000553065 PIP4K2AP48426 406 aaPredicted RBP14.13□□□□□ -0.15
DDX23-217ENST00000553065 TBC1D9BQ66K14 1250 aa14.13□□□□□ -0.15
DDX23-217ENST00000553065 TTC5Q8N0Z6 440 aa14.13□□□□□ -0.15
DDX23-217ENST00000553065 TBC1D2BQ9UPU7 963 aa14.13□□□□□ -0.15
DDX23-217ENST00000553065 CEP350Q5VT06 3117 aa14.13□□□□□ -0.15
DDX23-217ENST00000553065 NBPF26B4DH59 902 aa14.12□□□□□ -0.15
DDX23-217ENST00000553065 IL6STP40189 918 aaPredicted RBP14.12□□□□□ -0.15
DDX23-217ENST00000553065 PRELPP51888 382 aa14.12□□□□□ -0.15
DDX23-217ENST00000553065 NBPF10Q6P3W6 841 aaKnown RBP14.12□□□□□ -0.15
DDX23-217ENST00000553065 ARHGAP27Q6ZUM4 889 aa14.12□□□□□ -0.15
DDX23-217ENST00000553065 NBPF15Q8N660 670 aa14.12□□□□□ -0.15
DDX23-217ENST00000553065 FMNL2Q96PY5 1086 aa14.12□□□□□ -0.15
DDX23-217ENST00000553065 PIM2Q9P1W9 311 aa14.12□□□□□ -0.15
DDX23-217ENST00000553065 CARMIL3Q8ND23 1372 aa14.11□□□□□ -0.15
DDX23-217ENST00000553065 AFDNP55196 1824 aaKnown RBP14.11□□□□□ -0.15
DDX23-217ENST00000553065 KIF3CO14782 793 aa14.11□□□□□ -0.15
DDX23-217ENST00000553065 HTATSF1O43719 755 aaKnown RBP14.11□□□□□ -0.15
DDX23-217ENST00000553065 GIGYF1O75420 1035 aaPredicted RBP14.11□□□□□ -0.15
DDX23-217ENST00000553065 CAMTA2O94983 1202 aa14.11□□□□□ -0.15
DDX23-217ENST00000553065 CCDC24Q8N4L8 307 aa14.11□□□□□ -0.15
DDX23-217ENST00000553065 ZNF526Q8TF50 670 aaPredicted RBP14.11□□□□□ -0.15
DDX23-217ENST00000553065 TEX13AQ9BXU3 409 aaPredicted RBP14.11□□□□□ -0.15
DDX23-217ENST00000553065 NRXN2Q9P2S2 1712 aa14.11□□□□□ -0.15
DDX23-217ENST00000553065 BICDL1Q6ZP65 573 aa14.1□□□□□ -0.15
DDX23-217ENST00000553065 TAF7Q15545 349 aaPredicted RBP14.09□□□□□ -0.15
DDX23-217ENST00000553065 DALRD3Q5D0E6 543 aaKnown RBP14.09□□□□□ -0.15
DDX23-217ENST00000553065 THUMPD2Q9BTF0 503 aaKnown RBP14.09□□□□□ -0.15
DDX23-217ENST00000553065 DDX10Q13206 875 aaKnown RBP14.08□□□□□ -0.16
DDX23-217ENST00000553065 GPBP1L1Q9HC44 474 aaPredicted RBP14.08□□□□□ -0.16
DDX23-217ENST00000553065 A0A087WZG4 1122 aa14.07□□□□□ -0.16
DDX23-217ENST00000553065 SNRPA1P09661 255 aaKnown RBP14.07□□□□□ -0.16
DDX23-217ENST00000553065 C9orf131Q5VYM1 1079 aa14.07□□□□□ -0.16
DDX23-217ENST00000553065 PRR5LQ6MZQ0 368 aa14.07□□□□□ -0.16
DDX23-217ENST00000553065 RTF1Q92541 710 aaKnown RBP14.07□□□□□ -0.16
DDX23-217ENST00000553065 SENP3-EIF4A1A0A087X0R7 540 aa14.06□□□□□ -0.16
DDX23-217ENST00000553065 NFE2L2Q16236 605 aa14.06□□□□□ -0.16
DDX23-217ENST00000553065 ARFGEF1Q9Y6D6 1849 aa14.06□□□□□ -0.16
DDX23-217ENST00000553065 EIF4A1P60842 406 aaKnown RBP14.05□□□□□ -0.16
DDX23-217ENST00000553065 C2CD5Q86YS7 1000 aa14.05□□□□□ -0.16
DDX23-217ENST00000553065 ZNF330Q9Y3S2 320 aaPredicted RBP14.05□□□□□ -0.16
DDX23-217ENST00000553065 HLFQ16534 295 aa14.04□□□□□ -0.16
DDX23-217ENST00000553065 DZIP3Q86Y13 1208 aaKnown RBP14.04□□□□□ -0.16
DDX23-217ENST00000553065 BRIP1Q9BX63 1249 aa14.04□□□□□ -0.16
DDX23-217ENST00000553065 NMRK2Q9NPI5 230 aa14.04□□□□□ -0.16
DDX23-217ENST00000553065 ANKRD31Q8N7Z5 1873 aa14.04□□□□□ -0.16
DDX23-217ENST00000553065 DLG5Q8TDM6 1919 aa14.03□□□□□ -0.16
DDX23-217ENST00000553065 NFKBIEO00221 500 aa14.03□□□□□ -0.16
DDX23-217ENST00000553065 RASSF7Q02833 373 aa14.03□□□□□ -0.16
DDX23-217ENST00000553065 SBF1O95248 1867 aa14.03□□□□□ -0.16
DDX23-217ENST00000553065 H0YIN7 160 aa14.02□□□□□ -0.17
DDX23-217ENST00000553065 RALBP1Q15311 655 aa14.02□□□□□ -0.17
DDX23-217ENST00000553065 LRP10Q7Z4F1 713 aa14.02□□□□□ -0.17
DDX23-217ENST00000553065 TTLL6Q8N841 843 aa14.02□□□□□ -0.17
DDX23-217ENST00000553065 KLRG2A4D1S0 409 aaPredicted RBP14.01□□□□□ -0.17
DDX23-217ENST00000553065 CLEC4GQ6UXB4 293 aa14.01□□□□□ -0.17
DDX23-217ENST00000553065 SETDB2Q96T68 719 aa14.01□□□□□ -0.17
DDX23-217ENST00000553065 PDIA6Q15084 440 aa14□□□□□ -0.17
DDX23-217ENST00000553065 TTLL7Q6ZT98 887 aa14□□□□□ -0.17
DDX23-217ENST00000553065 C7orf43Q8WVR3 580 aa14□□□□□ -0.17
DDX23-217ENST00000553065 RNF181Q9P0P0 153 aa14□□□□□ -0.17
DDX23-217ENST00000553065 SCN7AQ01118 1682 aa14□□□□□ -0.17
DDX23-217ENST00000553065 SRGNP10124 158 aa13.99□□□□□ -0.17
DDX23-217ENST00000553065 TMPOP42166 694 aaKnown RBP13.99□□□□□ -0.17
DDX23-217ENST00000553065 RIPK4P57078 832 aa13.99□□□□□ -0.17
DDX23-217ENST00000553065 DLEC1Q9Y238 1755 aa13.99□□□□□ -0.17
DDX23-217ENST00000553065 POTECB2RU33 542 aa13.98□□□□□ -0.17
DDX23-217ENST00000553065 C21orf2O43822 256 aa13.98□□□□□ -0.17
DDX23-217ENST00000553065 HSPA6P17066 643 aa13.98□□□□□ -0.17
DDX23-217ENST00000553065 ZNF622Q969S3 477 aaKnown RBP eCLIP13.98□□□□□ -0.174e-6■■□□□ 13.5
DDX23-217ENST00000553065 RRAGCQ9HB90 399 aa13.98□□□□□ -0.17
DDX23-217ENST00000553065 ZNF219Q9P2Y4 722 aaPredicted RBP13.98□□□□□ -0.17
DDX23-217ENST00000553065 TRIM35Q9UPQ4 493 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms