RNA–Protein interactions for RNA: ENST00000553043.1

LETMD1-236, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-236ENST00000553043 C2CD5Q86YS7 1000 aa9.5□□□□□ -0.89
LETMD1-236ENST00000553043 L3MBTL2Q969R5 705 aa9.5□□□□□ -0.89
LETMD1-236ENST00000553043 TAF1DQ9H5J8 278 aaPredicted RBP9.5□□□□□ -0.89
LETMD1-236ENST00000553043 ITGB4P16144 1822 aa9.49□□□□□ -0.89
LETMD1-236ENST00000553043 PDE4DIPQ5VU43 2346 aa9.49□□□□□ -0.89
LETMD1-236ENST00000553043 H0YIN7 160 aa9.49□□□□□ -0.89
LETMD1-236ENST00000553043 C21orf2O43822 256 aa9.49□□□□□ -0.89
LETMD1-236ENST00000553043 PHKG2P15735 406 aa9.49□□□□□ -0.89
LETMD1-236ENST00000553043 CRKLP46109 303 aaKnown RBP9.49□□□□□ -0.89
LETMD1-236ENST00000553043 DGKZQ13574 1117 aa9.49□□□□□ -0.89
LETMD1-236ENST00000553043 USPL1Q5W0Q7 1092 aa9.49□□□□□ -0.89
LETMD1-236ENST00000553043 MAP1SQ66K74 1059 aaPredicted RBP9.49□□□□□ -0.89
LETMD1-236ENST00000553043 IFNL2Q8IZJ0 200 aa9.49□□□□□ -0.89
LETMD1-236ENST00000553043 GPR101Q96P66 508 aaPredicted RBP9.49□□□□□ -0.89
LETMD1-236ENST00000553043 GGNBP2Q9H3C7 697 aa9.49□□□□□ -0.89
LETMD1-236ENST00000553043 INSRP06213 1382 aa9.49□□□□□ -0.89
LETMD1-236ENST00000553043 PTCD1O75127 700 aaKnown RBP9.48□□□□□ -0.89
LETMD1-236ENST00000553043 ZPR1O75312 459 aa9.48□□□□□ -0.89
LETMD1-236ENST00000553043 SOX10P56693 466 aa9.48□□□□□ -0.89
LETMD1-236ENST00000553043 NFIXQ14938 502 aa9.48□□□□□ -0.89
LETMD1-236ENST00000553043 PRPF38BQ5VTL8 546 aaKnown RBP9.48□□□□□ -0.89
LETMD1-236ENST00000553043 CNTROBQ8N137 903 aa9.48□□□□□ -0.89
LETMD1-236ENST00000553043 ZNF622Q969S3 477 aaKnown RBP eCLIP9.48□□□□□ -0.89
LETMD1-236ENST00000553043 CAPNS2Q96L46 248 aa9.48□□□□□ -0.89
LETMD1-236ENST00000553043 SERPINB2P05120 415 aa9.47□□□□□ -0.89
LETMD1-236ENST00000553043 CYP4F22Q6NT55 531 aa9.47□□□□□ -0.89
LETMD1-236ENST00000553043 TAOK3Q9H2K8 898 aa9.47□□□□□ -0.89
LETMD1-236ENST00000553043 TIAM2Q8IVF5 1701 aa9.47□□□□□ -0.89
LETMD1-236ENST00000553043 ECE1P42892 770 aa9.46□□□□□ -0.9
LETMD1-236ENST00000553043 L3MBTL3Q96JM7 780 aaPredicted RBP9.46□□□□□ -0.9
LETMD1-236ENST00000553043 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.46□□□□□ -0.9
LETMD1-236ENST00000553043 HACL1Q9UJ83 578 aa9.46□□□□□ -0.9
LETMD1-236ENST00000553043 VIRMAQ69YN4 1812 aaKnown RBP9.45□□□□□ -0.9
LETMD1-236ENST00000553043 ERVV-2B6SEH9 535 aa9.45□□□□□ -0.9
LETMD1-236ENST00000553043 FYB1O15117 783 aa9.45□□□□□ -0.9
LETMD1-236ENST00000553043 PPM1GO15355 546 aaPredicted RBP9.45□□□□□ -0.9
LETMD1-236ENST00000553043 AOC2O75106 756 aa9.45□□□□□ -0.9
LETMD1-236ENST00000553043 EPHX2P34913 555 aa9.45□□□□□ -0.9
LETMD1-236ENST00000553043 CABP4P57796 275 aa9.45□□□□□ -0.9
LETMD1-236ENST00000553043 FMR1Q06787 632 aaKnown RBP eCLIP9.45□□□□□ -0.9
LETMD1-236ENST00000553043 PUS7Q96PZ0 661 aaKnown RBP9.45□□□□□ -0.9
LETMD1-236ENST00000553043 DDX21Q9NR30 783 aaKnown RBP eCLIP9.45□□□□□ -0.9
LETMD1-236ENST00000553043 FLT4P35916 1363 aa9.45□□□□□ -0.9
LETMD1-236ENST00000553043 INTS5Q6P9B9 1019 aaKnown RBP9.44□□□□□ -0.9
LETMD1-236ENST00000553043 BICDL1Q6ZP65 573 aa9.44□□□□□ -0.9
LETMD1-236ENST00000553043 EMILIN1Q9Y6C2 1016 aa9.44□□□□□ -0.9
LETMD1-236ENST00000553043 CARMIL3Q8ND23 1372 aa9.44□□□□□ -0.9
LETMD1-236ENST00000553043 LTBP3Q9NS15 1303 aa9.43□□□□□ -0.9
LETMD1-236ENST00000553043 PNMA8AQ86V59 439 aaPredicted RBP9.43□□□□□ -0.9
LETMD1-236ENST00000553043 CCDC24Q8N4L8 307 aa9.43□□□□□ -0.9
LETMD1-236ENST00000553043 EYA1Q99502 592 aa9.43□□□□□ -0.9
LETMD1-236ENST00000553043 RNF123Q5XPI4 1314 aa9.42□□□□□ -0.9
LETMD1-236ENST00000553043 ZNF541Q9H0D2 1346 aa9.42□□□□□ -0.9
LETMD1-236ENST00000553043 MAP2K2P36507 400 aa9.42□□□□□ -0.9
LETMD1-236ENST00000553043 CARD11Q9BXL7 1154 aa9.42□□□□□ -0.9
LETMD1-236ENST00000553043 BCL2L12Q9HB09 334 aa9.42□□□□□ -0.9
LETMD1-236ENST00000553043 TONSLQ96HA7 1378 aa9.41□□□□□ -0.9
LETMD1-236ENST00000553043 CA12O43570 354 aa9.41□□□□□ -0.9
LETMD1-236ENST00000553043 PDE6BP35913 854 aa9.41□□□□□ -0.9
LETMD1-236ENST00000553043 NARFQ9UHQ1 456 aa9.41□□□□□ -0.9
LETMD1-236ENST00000553043 KIF24Q5T7B8 1368 aa9.4□□□□□ -0.9
LETMD1-236ENST00000553043 SOS1Q07889 1333 aaPredicted RBP9.4□□□□□ -0.9
LETMD1-236ENST00000553043 HSP90AB1P08238 724 aaKnown RBP9.4□□□□□ -0.9
LETMD1-236ENST00000553043 CST9Q5W186 159 aa9.4□□□□□ -0.9
LETMD1-236ENST00000553043 DNAJC10Q8IXB1 793 aa9.4□□□□□ -0.9
LETMD1-236ENST00000553043 NFATC2IPQ8NCF5 419 aa9.4□□□□□ -0.9
LETMD1-236ENST00000553043 TLL2Q9Y6L7 1015 aa9.4□□□□□ -0.9
LETMD1-236ENST00000553043 MYH14Q7Z406 1995 aaKnown RBP9.4□□□□□ -0.9
LETMD1-236ENST00000553043 CCDC88AQ3V6T2 1871 aa9.4□□□□□ -0.91
LETMD1-236ENST00000553043 TRAF5O00463 557 aa9.39□□□□□ -0.91
LETMD1-236ENST00000553043 PRPF40BQ6NWY9 871 aaKnown RBP9.39□□□□□ -0.91
LETMD1-236ENST00000553043 CNKSR1Q969H4 720 aa9.39□□□□□ -0.91
LETMD1-236ENST00000553043 BRIP1Q9BX63 1249 aa9.39□□□□□ -0.91
LETMD1-236ENST00000553043 ZNF277Q9NRM2 450 aaPredicted RBP9.39□□□□□ -0.91
LETMD1-236ENST00000553043 COL5A3P25940 1745 aaPredicted RBP9.39□□□□□ -0.91
LETMD1-236ENST00000553043 NCAPD2Q15021 1401 aa9.39□□□□□ -0.91
LETMD1-236ENST00000553043 ST20-MTHFSA0A0A6YYL1 179 aa9.38□□□□□ -0.91
LETMD1-236ENST00000553043 PRKCSHP14314 528 aaPredicted RBP9.38□□□□□ -0.91
LETMD1-236ENST00000553043 MTHFSP49914 203 aa9.38□□□□□ -0.91
LETMD1-236ENST00000553043 NEUROD1Q13562 356 aa9.38□□□□□ -0.91
LETMD1-236ENST00000553043 SOGA3Q5TF21 947 aa9.38□□□□□ -0.91
LETMD1-236ENST00000553043 CIAPIN1Q6FI81 312 aa9.38□□□□□ -0.91
LETMD1-236ENST00000553043 SIN3AQ96ST3 1273 aa9.38□□□□□ -0.91
LETMD1-236ENST00000553043 PDZRN3Q9UPQ7 1066 aa9.38□□□□□ -0.91
LETMD1-236ENST00000553043 COL15A1P39059 1388 aa9.37□□□□□ -0.91
LETMD1-236ENST00000553043 BRPF1P55201 1214 aaPredicted RBP9.37□□□□□ -0.91
LETMD1-236ENST00000553043 HABP4Q5JVS0 413 aaKnown RBP9.37□□□□□ -0.91
LETMD1-236ENST00000553043 PRR5LQ6MZQ0 368 aa9.37□□□□□ -0.91
LETMD1-236ENST00000553043 ZNF530Q6P9A1 599 aaPredicted RBP9.37□□□□□ -0.91
LETMD1-236ENST00000553043 GCC1Q96CN9 775 aa9.37□□□□□ -0.91
LETMD1-236ENST00000553043 ZBTB1Q9Y2K1 713 aa9.37□□□□□ -0.91
LETMD1-236ENST00000553043 LTBP1Q14766 1721 aa9.36□□□□□ -0.91
LETMD1-236ENST00000553043 WASHC2AQ641Q2 1341 aa9.36□□□□□ -0.91
LETMD1-236ENST00000553043 ZNF831Q5JPB2 1677 aa9.36□□□□□ -0.91
LETMD1-236ENST00000553043 THSD7BQ9C0I4 1608 aa9.36□□□□□ -0.91
LETMD1-236ENST00000553043 NPHP1O15259 732 aa9.36□□□□□ -0.91
LETMD1-236ENST00000553043 CYP19A1P11511 503 aaPredicted RBP9.36□□□□□ -0.91
LETMD1-236ENST00000553043 CANXP27824 592 aaKnown RBP9.36□□□□□ -0.91
LETMD1-236ENST00000553043 PLEKHO1Q53GL0 409 aaPredicted RBP9.36□□□□□ -0.91
LETMD1-236ENST00000553043 CCDC93Q567U6 631 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms