RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 VIRMAQ69YN4 1812 aaKnown RBP12.52□□□□□ -0.41
TMEM116-216ENST00000552800 IBTKQ9P2D0 1353 aaPredicted RBP12.52□□□□□ -0.41
TMEM116-216ENST00000552800 COL5A2P05997 1499 aaPredicted RBP12.52□□□□□ -0.41
TMEM116-216ENST00000552800 SCN11AQ9UI33 1791 aa12.51□□□□□ -0.41
TMEM116-216ENST00000552800 TCERG1O14776 1098 aaKnown RBP12.51□□□□□ -0.41
TMEM116-216ENST00000552800 HSP90AB1P08238 724 aaKnown RBP12.51□□□□□ -0.41
TMEM116-216ENST00000552800 TATP17735 454 aaPredicted RBP12.51□□□□□ -0.41
TMEM116-216ENST00000552800 FRAT1Q92837 279 aaPredicted RBP12.51□□□□□ -0.41
TMEM116-216ENST00000552800 LGR6Q9HBX8 967 aa12.51□□□□□ -0.41
TMEM116-216ENST00000552800 LAS1LQ9Y4W2 734 aaKnown RBP12.51□□□□□ -0.41
TMEM116-216ENST00000552800 ROBO1Q9Y6N7 1651 aa12.51□□□□□ -0.41
TMEM116-216ENST00000552800 EIF4A1P60842 406 aaKnown RBP12.5□□□□□ -0.41
TMEM116-216ENST00000552800 ZNF530Q6P9A1 599 aaPredicted RBP12.5□□□□□ -0.41
TMEM116-216ENST00000552800 IFNL2Q8IZJ0 200 aa12.5□□□□□ -0.41
TMEM116-216ENST00000552800 USHBP1Q8N6Y0 703 aa12.5□□□□□ -0.41
TMEM116-216ENST00000552800 RAPGEF4Q8WZA2 1011 aa12.5□□□□□ -0.41
TMEM116-216ENST00000552800 TSHZ2Q9NRE2 1034 aa12.5□□□□□ -0.41
TMEM116-216ENST00000552800 MRC1P22897 1456 aa12.5□□□□□ -0.41
TMEM116-216ENST00000552800 RGS12O14924 1447 aa12.49□□□□□ -0.41
TMEM116-216ENST00000552800 PHKG2P15735 406 aa12.49□□□□□ -0.41
TMEM116-216ENST00000552800 CANXP27824 592 aaKnown RBP12.49□□□□□ -0.41
TMEM116-216ENST00000552800 C1orf141Q5JVX7 400 aa12.49□□□□□ -0.41
TMEM116-216ENST00000552800 CCDC30Q5VVM6 783 aa12.49□□□□□ -0.41
TMEM116-216ENST00000552800 DCAF5Q96JK2 942 aa12.49□□□□□ -0.41
TMEM116-216ENST00000552800 BCL2L13Q9BXK5 485 aa12.49□□□□□ -0.41
TMEM116-216ENST00000552800 PCDHB15Q9Y5E8 787 aa12.49□□□□□ -0.41
TMEM116-216ENST00000552800 COL14A1Q05707 1796 aaKnown RBP12.48□□□□□ -0.41
TMEM116-216ENST00000552800 PARP4Q9UKK3 1724 aaKnown RBP12.48□□□□□ -0.41
TMEM116-216ENST00000552800 TTLL13PA6NNM8 815 aa12.48□□□□□ -0.41
TMEM116-216ENST00000552800 TOM1O60784 492 aa12.48□□□□□ -0.41
TMEM116-216ENST00000552800 FTSJ3Q8IY81 847 aaKnown RBP12.48□□□□□ -0.41
TMEM116-216ENST00000552800 TMEM57Q8N5G2 664 aa12.48□□□□□ -0.41
TMEM116-216ENST00000552800 PRDM11Q9NQV5 511 aa12.48□□□□□ -0.41
TMEM116-216ENST00000552800 TNNQ9UQP3 1299 aa12.48□□□□□ -0.41
TMEM116-216ENST00000552800 MEGF6O75095 1541 aa12.47□□□□□ -0.41
TMEM116-216ENST00000552800 IGHDP01880 384 aa12.47□□□□□ -0.41
TMEM116-216ENST00000552800 RWDD1Q9H446 243 aaPredicted RBP12.47□□□□□ -0.41
TMEM116-216ENST00000552800 NLRP2Q9NX02 1062 aa12.47□□□□□ -0.41
TMEM116-216ENST00000552800 COL16A1Q07092 1604 aaPredicted RBP12.47□□□□□ -0.41
TMEM116-216ENST00000552800 ERVV-2B6SEH9 535 aa12.46□□□□□ -0.41
TMEM116-216ENST00000552800 CYP27B1O15528 508 aa12.46□□□□□ -0.41
TMEM116-216ENST00000552800 CHRNA2Q15822 529 aa12.46□□□□□ -0.41
TMEM116-216ENST00000552800 SMC5Q8IY18 1101 aa12.46□□□□□ -0.41
TMEM116-216ENST00000552800 SLAIN1Q8ND83 568 aa12.46□□□□□ -0.41
TMEM116-216ENST00000552800 SLC52A2Q9HAB3 445 aa12.46□□□□□ -0.41
TMEM116-216ENST00000552800 KDM6AO15550 1401 aaPredicted RBP12.45□□□□□ -0.42
TMEM116-216ENST00000552800 BTBD11A6QL63 1104 aa12.45□□□□□ -0.42
TMEM116-216ENST00000552800 ELL2O00472 640 aaPredicted RBP12.45□□□□□ -0.42
TMEM116-216ENST00000552800 TEFQ10587 303 aa12.45□□□□□ -0.42
TMEM116-216ENST00000552800 KRT24Q2M2I5 525 aa12.45□□□□□ -0.42
TMEM116-216ENST00000552800 IER5LQ5T953 404 aa12.45□□□□□ -0.42
TMEM116-216ENST00000552800 BBXQ8WY36 941 aaPredicted RBP12.45□□□□□ -0.42
TMEM116-216ENST00000552800 MIS18AQ9NYP9 233 aa12.45□□□□□ -0.42
TMEM116-216ENST00000552800 N4BP2Q86UW6 1770 aaPredicted RBP12.44□□□□□ -0.42
TMEM116-216ENST00000552800 GIGYF1O75420 1035 aaPredicted RBP12.44□□□□□ -0.42
TMEM116-216ENST00000552800 MPRIPQ6WCQ1 1025 aa12.44□□□□□ -0.42
TMEM116-216ENST00000552800 DISP2A7MBM2 1401 aa12.44□□□□□ -0.42
TMEM116-216ENST00000552800 PXDNLA1KZ92 1463 aa12.43□□□□□ -0.42
TMEM116-216ENST00000552800 IL2RBP14784 551 aa12.43□□□□□ -0.42
TMEM116-216ENST00000552800 ZCRB1Q8TBF4 217 aaKnown RBP12.43□□□□□ -0.42
TMEM116-216ENST00000552800 THRAP3Q9Y2W1 955 aaKnown RBP12.43□□□□□ -0.42
TMEM116-216ENST00000552800 PCDH11XQ9BZA7 1347 aa12.42□□□□□ -0.42
TMEM116-216ENST00000552800 PCDH11YQ9BZA8 1340 aa12.42□□□□□ -0.42
TMEM116-216ENST00000552800 CSB-PGBD3P0DP91 1061 aa12.42□□□□□ -0.42
TMEM116-216ENST00000552800 CCT4P50991 539 aaKnown RBP12.42□□□□□ -0.42
TMEM116-216ENST00000552800 ZNF790Q6PG37 636 aa12.42□□□□□ -0.42
TMEM116-216ENST00000552800 CDCA7Q9BWT1 371 aaPredicted RBP12.42□□□□□ -0.42
TMEM116-216ENST00000552800 STK31Q9BXU1 1019 aa12.42□□□□□ -0.42
TMEM116-216ENST00000552800 ZBTB7CA1YPR0 619 aa12.41□□□□□ -0.42
TMEM116-216ENST00000552800 TOM1L2Q6ZVM7 507 aa12.41□□□□□ -0.42
TMEM116-216ENST00000552800 RPAP2Q8IXW5 612 aaPredicted RBP12.41□□□□□ -0.42
TMEM116-216ENST00000552800 SHANK3Q9BYB0 1731 aa12.41□□□□□ -0.42
TMEM116-216ENST00000552800 PLCH1Q4KWH8 1693 aa12.41□□□□□ -0.42
TMEM116-216ENST00000552800 PHLPP1O60346 1717 aa12.4□□□□□ -0.42
TMEM116-216ENST00000552800 NWD2Q9ULI1 1742 aa12.4□□□□□ -0.42
TMEM116-216ENST00000552800 FLIIQ13045 1269 aa12.4□□□□□ -0.42
TMEM116-216ENST00000552800 LARP1Q6PKG0 1096 aaKnown RBP12.4□□□□□ -0.42
TMEM116-216ENST00000552800 ITPRIPQ8IWB1 547 aa12.4□□□□□ -0.42
TMEM116-216ENST00000552800 EFCAB3Q8N7B9 438 aa12.4□□□□□ -0.42
TMEM116-216ENST00000552800 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.4□□□□□ -0.42
TMEM116-216ENST00000552800 DBF4Q9UBU7 674 aaPredicted RBP12.4□□□□□ -0.42
TMEM116-216ENST00000552800 EVA1CP58658 441 aa12.39□□□□□ -0.43
TMEM116-216ENST00000552800 G2E3Q7L622 706 aa12.39□□□□□ -0.43
TMEM116-216ENST00000552800 NFATC2IPQ8NCF5 419 aa12.39□□□□□ -0.43
TMEM116-216ENST00000552800 GCC1Q96CN9 775 aa12.39□□□□□ -0.43
TMEM116-216ENST00000552800 TMEM121BQ9BXQ6 578 aaPredicted RBP12.39□□□□□ -0.43
TMEM116-216ENST00000552800 LRP6O75581 1613 aa12.39□□□□□ -0.43
TMEM116-216ENST00000552800 ERBB4Q15303 1308 aa12.38□□□□□ -0.43
TMEM116-216ENST00000552800 ATP10DQ9P241 1426 aa12.38□□□□□ -0.43
TMEM116-216ENST00000552800 SLIT2O94813 1529 aa12.38□□□□□ -0.43
TMEM116-216ENST00000552800 KCNQ3O43525 872 aa12.38□□□□□ -0.43
TMEM116-216ENST00000552800 HDGFL1Q5TGJ6 251 aa12.38□□□□□ -0.43
TMEM116-216ENST00000552800 BACH2Q9BYV9 841 aa12.38□□□□□ -0.43
TMEM116-216ENST00000552800 DDX21Q9NR30 783 aaKnown RBP eCLIP12.38□□□□□ -0.43
TMEM116-216ENST00000552800 HYPKQ9NX55 129 aa12.38□□□□□ -0.43
TMEM116-216ENST00000552800 BTG4Q9NY30 223 aa12.38□□□□□ -0.43
TMEM116-216ENST00000552800 RBM19Q9Y4C8 960 aaKnown RBP12.38□□□□□ -0.43
TMEM116-216ENST00000552800 UBR2Q8IWV8 1755 aa12.38□□□□□ -0.43
TMEM116-216ENST00000552800 PDIA6Q15084 440 aa12.37□□□□□ -0.43
TMEM116-216ENST00000552800 BARGINQ6ZT62 677 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms