RNA–Protein interactions for RNA: ENST00000552739.5

LETMD1-235, Transcript of LETM1 domain containing 1, humanhuman

TSL 2 BASIC

Gene LETMD1, Length 1,713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-235ENST00000552739 PTCD1O75127 700 aaKnown RBP18.52■□□□□ 0.55
LETMD1-235ENST00000552739 NEFMP07197 916 aa18.52■□□□□ 0.55
LETMD1-235ENST00000552739 PTGER2P43116 358 aa18.52■□□□□ 0.55
LETMD1-235ENST00000552739 TEFQ10587 303 aa18.52■□□□□ 0.55
LETMD1-235ENST00000552739 SLC16A10Q8TF71 515 aa18.52■□□□□ 0.55
LETMD1-235ENST00000552739 PNNQ9H307 717 aaKnown RBP18.52■□□□□ 0.55
LETMD1-235ENST00000552739 C20orf194Q5TEA3 1177 aa18.51■□□□□ 0.55
LETMD1-235ENST00000552739 SLC39A6Q13433 755 aa18.5■□□□□ 0.55
LETMD1-235ENST00000552739 PDE3AQ14432 1141 aa18.5■□□□□ 0.55
LETMD1-235ENST00000552739 AMIGO3Q86WK7 504 aa18.5■□□□□ 0.55
LETMD1-235ENST00000552739 COL23A1Q86Y22 540 aaPredicted RBP18.5■□□□□ 0.55
LETMD1-235ENST00000552739 SGIP1Q9BQI5 828 aa18.5■□□□□ 0.55
LETMD1-235ENST00000552739 ATF5Q9Y2D1 282 aaPredicted RBP18.5■□□□□ 0.55
LETMD1-235ENST00000552739 CNTNAP4Q9C0A0 1308 aa18.5■□□□□ 0.55
LETMD1-235ENST00000552739 MAPK8IP3Q9UPT6 1336 aa18.5■□□□□ 0.55
LETMD1-235ENST00000552739 HTATSF1O43719 755 aaKnown RBP18.49■□□□□ 0.55
LETMD1-235ENST00000552739 FLAD1Q8NFF5 587 aa18.49■□□□□ 0.55
LETMD1-235ENST00000552739 RTF1Q92541 710 aaKnown RBP18.49■□□□□ 0.55
LETMD1-235ENST00000552739 KDM3BQ7LBC6 1761 aa18.49■□□□□ 0.55
LETMD1-235ENST00000552739 FAM161AQ3B820 660 aa18.49■□□□□ 0.55
LETMD1-235ENST00000552739 GNPATO15228 680 aa18.48■□□□□ 0.55
LETMD1-235ENST00000552739 SSFA2P28290 1259 aa18.48■□□□□ 0.55
LETMD1-235ENST00000552739 NBR1Q14596 966 aa18.48■□□□□ 0.55
LETMD1-235ENST00000552739 NFE2L2Q16236 605 aa18.48■□□□□ 0.55
LETMD1-235ENST00000552739 MCM10Q7L590 875 aa18.48■□□□□ 0.55
LETMD1-235ENST00000552739 RC3H1Q5TC82 1133 aaKnown RBP18.47■□□□□ 0.55
LETMD1-235ENST00000552739 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.46■□□□□ 0.55
LETMD1-235ENST00000552739 PPP1R1BQ9UD71 204 aaPredicted RBP18.46■□□□□ 0.55
LETMD1-235ENST00000552739 APAF1O14727 1248 aa18.46■□□□□ 0.55
LETMD1-235ENST00000552739 PHF14O94880 888 aa18.46■□□□□ 0.55
LETMD1-235ENST00000552739 TTC5Q8N0Z6 440 aa18.46■□□□□ 0.55
LETMD1-235ENST00000552739 VSIG10Q8N0Z9 540 aa18.46■□□□□ 0.55
LETMD1-235ENST00000552739 DCTN1Q14203 1278 aa18.45■□□□□ 0.54
LETMD1-235ENST00000552739 ZNF790Q6PG37 636 aa18.45■□□□□ 0.54
LETMD1-235ENST00000552739 SMIM5Q71RC9 77 aa18.45■□□□□ 0.54
LETMD1-235ENST00000552739 LAMB4A4D0S4 1761 aa18.44■□□□□ 0.54
LETMD1-235ENST00000552739 CRKLP46109 303 aaKnown RBP18.44■□□□□ 0.54
LETMD1-235ENST00000552739 BTBD11A6QL63 1104 aa18.43■□□□□ 0.54
LETMD1-235ENST00000552739 CCDC27Q2M243 656 aa18.43■□□□□ 0.54
LETMD1-235ENST00000552739 NPM2Q86SE8 214 aaKnown RBP18.43■□□□□ 0.54
LETMD1-235ENST00000552739 DNAJC10Q8IXB1 793 aa18.43■□□□□ 0.54
LETMD1-235ENST00000552739 HEG1Q9ULI3 1381 aa18.43■□□□□ 0.54
LETMD1-235ENST00000552739 ZNF496Q96IT1 587 aaPredicted RBP18.43■□□□□ 0.54
LETMD1-235ENST00000552739 RTCBQ9Y3I0 505 aaKnown RBP18.43■□□□□ 0.54
LETMD1-235ENST00000552739 RPS6KA4O75676 772 aa18.42■□□□□ 0.54
LETMD1-235ENST00000552739 ADRA2BP18089 450 aa18.42■□□□□ 0.54
LETMD1-235ENST00000552739 C8orf34Q49A92 452 aa18.42■□□□□ 0.54
LETMD1-235ENST00000552739 CYP19A1P11511 503 aaPredicted RBP18.41■□□□□ 0.54
LETMD1-235ENST00000552739 POLD1P28340 1107 aa18.41■□□□□ 0.54
LETMD1-235ENST00000552739 CCDC146Q8IYE0 955 aa18.41■□□□□ 0.54
LETMD1-235ENST00000552739 ARXQ96QS3 562 aa18.41■□□□□ 0.54
LETMD1-235ENST00000552739 TMPOP42166 694 aaKnown RBP18.4■□□□□ 0.54
LETMD1-235ENST00000552739 MSL1Q68DK7 614 aa18.4■□□□□ 0.54
LETMD1-235ENST00000552739 INTS5Q6P9B9 1019 aaKnown RBP18.4■□□□□ 0.54
LETMD1-235ENST00000552739 WDR63Q8IWG1 891 aa18.4■□□□□ 0.54
LETMD1-235ENST00000552739 RUNDC1Q96C34 613 aa18.4■□□□□ 0.54
LETMD1-235ENST00000552739 FMNL2Q96PY5 1086 aa18.4■□□□□ 0.54
LETMD1-235ENST00000552739 CCDC87Q9NVE4 849 aa18.4■□□□□ 0.54
LETMD1-235ENST00000552739 KCNQ3O43525 872 aa18.4■□□□□ 0.54
LETMD1-235ENST00000552739 WWC1Q8IX03 1113 aa18.4■□□□□ 0.54
LETMD1-235ENST00000552739 SPINK5Q9NQ38 1064 aaPredicted RBP18.4■□□□□ 0.54
LETMD1-235ENST00000552739 TAF7Q15545 349 aaPredicted RBP18.39■□□□□ 0.53
LETMD1-235ENST00000552739 TRAPPC3LQ5T215 181 aa18.39■□□□□ 0.53
LETMD1-235ENST00000552739 RIPK4P57078 832 aa18.38■□□□□ 0.53
LETMD1-235ENST00000552739 THUMPD2Q9BTF0 503 aaKnown RBP18.38■□□□□ 0.53
LETMD1-235ENST00000552739 SOS1Q07889 1333 aaPredicted RBP18.38■□□□□ 0.53
LETMD1-235ENST00000552739 SCN7AQ01118 1682 aa18.38■□□□□ 0.53
LETMD1-235ENST00000552739 LMOD3Q0VAK6 560 aa18.37■□□□□ 0.53
LETMD1-235ENST00000552739 ARHGEF1Q92888 912 aaKnown RBP18.37■□□□□ 0.53
LETMD1-235ENST00000552739 FHDC1Q9C0D6 1143 aaPredicted RBP18.37■□□□□ 0.53
LETMD1-235ENST00000552739 TEX13AQ9BXU3 409 aaPredicted RBP18.37■□□□□ 0.53
LETMD1-235ENST00000552739 ZBTB1Q9Y2K1 713 aa18.36■□□□□ 0.53
LETMD1-235ENST00000552739 RRP7AQ9Y3A4 280 aaKnown RBP18.36■□□□□ 0.53
LETMD1-235ENST00000552739 COL15A1P39059 1388 aa18.35■□□□□ 0.53
LETMD1-235ENST00000552739 STARD3NLO95772 234 aa18.35■□□□□ 0.53
LETMD1-235ENST00000552739 KIF13BQ9NQT8 1826 aa18.35■□□□□ 0.53
LETMD1-235ENST00000552739 BCORQ6W2J9 1755 aa18.35■□□□□ 0.53
LETMD1-235ENST00000552739 CT47B1P0C2W7 299 aaPredicted RBP18.35■□□□□ 0.53
LETMD1-235ENST00000552739 RFC4P35249 363 aa18.35■□□□□ 0.53
LETMD1-235ENST00000552739 CLUAP1Q96AJ1 413 aa18.35■□□□□ 0.53
LETMD1-235ENST00000552739 USP42Q9H9J4 1324 aaKnown RBP18.34■□□□□ 0.53
LETMD1-235ENST00000552739 SYT17Q9BSW7 474 aa18.34■□□□□ 0.53
LETMD1-235ENST00000552739 MIS18AQ9NYP9 233 aa18.34■□□□□ 0.53
LETMD1-235ENST00000552739 BCAR3O75815 825 aa18.33■□□□□ 0.52
LETMD1-235ENST00000552739 GYS1P13807 737 aa18.33■□□□□ 0.52
LETMD1-235ENST00000552739 TRIM35Q9UPQ4 493 aa18.32■□□□□ 0.52
LETMD1-235ENST00000552739 SNRPA1P09661 255 aaKnown RBP18.32■□□□□ 0.52
LETMD1-235ENST00000552739 NEUROD2Q15784 382 aa18.32■□□□□ 0.52
LETMD1-235ENST00000552739 SRP68Q9UHB9 627 aaKnown RBP18.32■□□□□ 0.52
LETMD1-235ENST00000552739 PRAMEF22A3QJZ6 481 aa18.31■□□□□ 0.52
LETMD1-235ENST00000552739 CANXP27824 592 aaKnown RBP18.31■□□□□ 0.52
LETMD1-235ENST00000552739 NLGN1Q8N2Q7 840 aa18.31■□□□□ 0.52
LETMD1-235ENST00000552739 KIAA1551Q9HCM1 1747 aa18.3■□□□□ 0.52
LETMD1-235ENST00000552739 EIF5P55010 431 aaKnown RBP18.3■□□□□ 0.52
LETMD1-235ENST00000552739 BABAM1Q9NWV8 329 aa18.3■□□□□ 0.52
LETMD1-235ENST00000552739 USP16Q9Y5T5 823 aa18.3■□□□□ 0.52
LETMD1-235ENST00000552739 RARSP54136 660 aaKnown RBP18.29■□□□□ 0.52
LETMD1-235ENST00000552739 EIF4A1P60842 406 aaKnown RBP18.29■□□□□ 0.52
LETMD1-235ENST00000552739 DAXXQ9UER7 740 aaPredicted RBP18.29■□□□□ 0.52
LETMD1-235ENST00000552739 MMP10P09238 476 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms