RNA–Protein interactions for RNA: ENST00000552583.1

ITGA5-212, Transcript of integrin subunit alpha 5, humanhuman

TSL 2

Gene ITGA5, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-212ENST00000552583 MCM10Q7L590 875 aa18.78■□□□□ 0.6
ITGA5-212ENST00000552583 SCN7AQ01118 1682 aa18.78■□□□□ 0.6
ITGA5-212ENST00000552583 NLGN2Q8NFZ4 835 aa18.77■□□□□ 0.6
ITGA5-212ENST00000552583 PNISRQ8TF01 805 aaKnown RBP18.77■□□□□ 0.6
ITGA5-212ENST00000552583 ZBTB1Q9Y2K1 713 aa18.77■□□□□ 0.6
ITGA5-212ENST00000552583 C10orf71Q711Q0 1435 aa18.76■□□□□ 0.59
ITGA5-212ENST00000552583 LMOD3Q0VAK6 560 aa18.76■□□□□ 0.59
ITGA5-212ENST00000552583 WDR43Q15061 677 aaKnown RBP eCLIP18.76■□□□□ 0.59
ITGA5-212ENST00000552583 A0A087WZG4 1122 aa18.75■□□□□ 0.59
ITGA5-212ENST00000552583 ZPR1O75312 459 aa18.75■□□□□ 0.59
ITGA5-212ENST00000552583 TAF7Q15545 349 aaPredicted RBP18.75■□□□□ 0.59
ITGA5-212ENST00000552583 GPR162Q16538 588 aa18.74■□□□□ 0.59
ITGA5-212ENST00000552583 NARFQ9UHQ1 456 aa18.74■□□□□ 0.59
ITGA5-212ENST00000552583 PARP3Q9Y6F1 533 aa18.74■□□□□ 0.59
ITGA5-212ENST00000552583 KIAA1551Q9HCM1 1747 aa18.74■□□□□ 0.59
ITGA5-212ENST00000552583 SNRPA1P09661 255 aaKnown RBP18.73■□□□□ 0.59
ITGA5-212ENST00000552583 IL6STP40189 918 aaPredicted RBP18.73■□□□□ 0.59
ITGA5-212ENST00000552583 EIF5P55010 431 aaKnown RBP18.73■□□□□ 0.59
ITGA5-212ENST00000552583 DCTN1Q14203 1278 aa18.73■□□□□ 0.59
ITGA5-212ENST00000552583 BCORQ6W2J9 1755 aa18.73■□□□□ 0.59
ITGA5-212ENST00000552583 SRP68Q9UHB9 627 aaKnown RBP18.72■□□□□ 0.59
ITGA5-212ENST00000552583 NRXN2Q9P2S2 1712 aa18.71■□□□□ 0.59
ITGA5-212ENST00000552583 GRIN3BO60391 1043 aa18.71■□□□□ 0.59
ITGA5-212ENST00000552583 YY1P25490 414 aa18.71■□□□□ 0.59
ITGA5-212ENST00000552583 FKBP8Q14318 412 aa18.71■□□□□ 0.59
ITGA5-212ENST00000552583 PXDNLA1KZ92 1463 aa18.71■□□□□ 0.59
ITGA5-212ENST00000552583 KCNQ3O43525 872 aa18.7■□□□□ 0.58
ITGA5-212ENST00000552583 CANXP27824 592 aaKnown RBP18.7■□□□□ 0.58
ITGA5-212ENST00000552583 BRCA1P38398 1863 aaKnown RBP18.7■□□□□ 0.58
ITGA5-212ENST00000552583 NPM2Q86SE8 214 aaKnown RBP18.7■□□□□ 0.58
ITGA5-212ENST00000552583 RUNDC1Q96C34 613 aa18.7■□□□□ 0.58
ITGA5-212ENST00000552583 BABAM1Q9NWV8 329 aa18.7■□□□□ 0.58
ITGA5-212ENST00000552583 TMPOP42166 694 aaKnown RBP18.69■□□□□ 0.58
ITGA5-212ENST00000552583 TGFB2P61812 414 aa18.69■□□□□ 0.58
ITGA5-212ENST00000552583 USPL1Q5W0Q7 1092 aa18.69■□□□□ 0.58
ITGA5-212ENST00000552583 AFDNP55196 1824 aaKnown RBP18.68■□□□□ 0.58
ITGA5-212ENST00000552583 RIPK4P57078 832 aa18.68■□□□□ 0.58
ITGA5-212ENST00000552583 N4BP2Q86UW6 1770 aaPredicted RBP18.68■□□□□ 0.58
ITGA5-212ENST00000552583 RGL2O15211 777 aa18.67■□□□□ 0.58
ITGA5-212ENST00000552583 TM4SF1P30408 202 aa18.67■□□□□ 0.58
ITGA5-212ENST00000552583 DDR1Q08345 913 aa18.67■□□□□ 0.58
ITGA5-212ENST00000552583 PELP1Q8IZL8 1130 aaKnown RBP18.67■□□□□ 0.58
ITGA5-212ENST00000552583 POLRMTO00411 1230 aaKnown RBP18.66■□□□□ 0.58
ITGA5-212ENST00000552583 ADAMTS8Q9UP79 889 aa18.66■□□□□ 0.58
ITGA5-212ENST00000552583 YBX3P16989 372 aaKnown RBP eCLIP18.65■□□□□ 0.58
ITGA5-212ENST00000552583 USP16Q9Y5T5 823 aa18.65■□□□□ 0.58
ITGA5-212ENST00000552583 ARFGEF1Q9Y6D6 1849 aa18.65■□□□□ 0.58
ITGA5-212ENST00000552583 DLEC1Q9Y238 1755 aa18.64■□□□□ 0.57
ITGA5-212ENST00000552583 A1BGP04217 495 aa18.64■□□□□ 0.57
ITGA5-212ENST00000552583 NFIXQ14938 502 aa18.64■□□□□ 0.57
ITGA5-212ENST00000552583 THUMPD2Q9BTF0 503 aaKnown RBP18.64■□□□□ 0.57
ITGA5-212ENST00000552583 BCL2L12Q9HB09 334 aa18.64■□□□□ 0.57
ITGA5-212ENST00000552583 GOLGB1Q14789 3259 aaKnown RBP18.63■□□□□ 0.57
ITGA5-212ENST00000552583 GIGYF1O75420 1035 aaPredicted RBP18.63■□□□□ 0.57
ITGA5-212ENST00000552583 EIF4A1P60842 406 aaKnown RBP18.63■□□□□ 0.57
ITGA5-212ENST00000552583 CCDC146Q8IYE0 955 aa18.63■□□□□ 0.57
ITGA5-212ENST00000552583 TSPYL4Q9UJ04 414 aa18.63■□□□□ 0.57
ITGA5-212ENST00000552583 ZNF330Q9Y3S2 320 aaPredicted RBP18.63■□□□□ 0.57
ITGA5-212ENST00000552583 ERBB4Q15303 1308 aa18.63■□□□□ 0.57
ITGA5-212ENST00000552583 DZIP3Q86Y13 1208 aaKnown RBP18.62■□□□□ 0.57
ITGA5-212ENST00000552583 MIS18AQ9NYP9 233 aa18.62■□□□□ 0.57
ITGA5-212ENST00000552583 CARMIL3Q8ND23 1372 aa18.62■□□□□ 0.57
ITGA5-212ENST00000552583 PRAMEF22A3QJZ6 481 aa18.61■□□□□ 0.57
ITGA5-212ENST00000552583 ANP32CO43423 234 aa18.61■□□□□ 0.57
ITGA5-212ENST00000552583 CAMTA2O94983 1202 aa18.61■□□□□ 0.57
ITGA5-212ENST00000552583 CLEC4GQ6UXB4 293 aa18.61■□□□□ 0.57
ITGA5-212ENST00000552583 ZNF652Q9Y2D9 606 aa18.61■□□□□ 0.57
ITGA5-212ENST00000552583 UTRNP46939 3433 aa18.61■□□□□ 0.57
ITGA5-212ENST00000552583 TBC1D2BQ9UPU7 963 aa18.6■□□□□ 0.57
ITGA5-212ENST00000552583 SERPINB2P05120 415 aa18.59■□□□□ 0.57
ITGA5-212ENST00000552583 RRP7AQ9Y3A4 280 aaKnown RBP18.59■□□□□ 0.57
ITGA5-212ENST00000552583 NBPF26B4DH59 902 aa18.58■□□□□ 0.56
ITGA5-212ENST00000552583 DPEP1P16444 411 aa18.58■□□□□ 0.56
ITGA5-212ENST00000552583 CALD1Q05682 793 aaKnown RBP18.58■□□□□ 0.56
ITGA5-212ENST00000552583 NEUROD2Q15784 382 aa18.58■□□□□ 0.56
ITGA5-212ENST00000552583 NBPF10Q6P3W6 841 aaKnown RBP18.58■□□□□ 0.56
ITGA5-212ENST00000552583 NBPF15Q8N660 670 aa18.58■□□□□ 0.56
ITGA5-212ENST00000552583 TRIM35Q9UPQ4 493 aa18.58■□□□□ 0.56
ITGA5-212ENST00000552583 PDZRN3Q9UPQ7 1066 aa18.58■□□□□ 0.56
ITGA5-212ENST00000552583 ANKRD31Q8N7Z5 1873 aa18.57■□□□□ 0.56
ITGA5-212ENST00000552583 A0A0G2JLW4 131 aa18.57■□□□□ 0.56
ITGA5-212ENST00000552583 TBC1D9BQ66K14 1250 aa18.57■□□□□ 0.56
ITGA5-212ENST00000552583 CHL1O00533 1208 aa18.56■□□□□ 0.56
ITGA5-212ENST00000552583 DIEXFQ68CQ4 756 aaKnown RBP18.56■□□□□ 0.56
ITGA5-212ENST00000552583 SETDB2Q96T68 719 aa18.56■□□□□ 0.56
ITGA5-212ENST00000552583 PIM2Q9P1W9 311 aa18.56■□□□□ 0.56
ITGA5-212ENST00000552583 BICDL1Q6ZP65 573 aa18.55■□□□□ 0.56
ITGA5-212ENST00000552583 BCS1LQ9Y276 419 aa18.55■□□□□ 0.56
ITGA5-212ENST00000552583 NUP98P52948 1817 aa18.55■□□□□ 0.56
ITGA5-212ENST00000552583 ERVV-1B6SEH8 477 aa18.54■□□□□ 0.56
ITGA5-212ENST00000552583 HOXB7P09629 217 aa18.54■□□□□ 0.56
ITGA5-212ENST00000552583 KCNA3P22001 575 aa18.54■□□□□ 0.56
ITGA5-212ENST00000552583 PIP4K2AP48426 406 aaPredicted RBP18.54■□□□□ 0.56
ITGA5-212ENST00000552583 DALRD3Q5D0E6 543 aaKnown RBP18.54■□□□□ 0.56
ITGA5-212ENST00000552583 CNBD1Q8NA66 436 aa18.54■□□□□ 0.56
ITGA5-212ENST00000552583 APAF1O14727 1248 aa18.53■□□□□ 0.56
ITGA5-212ENST00000552583 COL11A2P13942 1736 aaPredicted RBP18.53■□□□□ 0.56
ITGA5-212ENST00000552583 KIF6Q6ZMV9 814 aa18.53■□□□□ 0.56
ITGA5-212ENST00000552583 ZNF784Q8NCA9 323 aaPredicted RBP18.53■□□□□ 0.56
ITGA5-212ENST00000552583 CFAP44Q96MT7 982 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms