RNA–Protein interactions for RNA: ENST00000552428.6

R3HDM2-214, Transcript of R3H domain containing 2, humanhuman

TSL 5

Gene R3HDM2, Length 430 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-214ENST00000552428 ARID5BQ14865 1188 aa8.37□□□□□ -1.07
R3HDM2-214ENST00000552428 SF3A1Q15459 793 aaKnown RBP8.37□□□□□ -1.07
R3HDM2-214ENST00000552428 TMC1Q8TDI8 760 aa8.37□□□□□ -1.07
R3HDM2-214ENST00000552428 MYO19Q96H55 970 aa8.37□□□□□ -1.07
R3HDM2-214ENST00000552428 RNF223E7ERA6 249 aa8.36□□□□□ -1.07
R3HDM2-214ENST00000552428 LILRA1O75019 489 aa8.36□□□□□ -1.07
R3HDM2-214ENST00000552428 LDHBP07195 334 aaKnown RBP8.36□□□□□ -1.07
R3HDM2-214ENST00000552428 ERCC5P28715 1186 aaPredicted RBP8.36□□□□□ -1.07
R3HDM2-214ENST00000552428 SMTNP53814 917 aa8.36□□□□□ -1.07
R3HDM2-214ENST00000552428 XPCQ01831 940 aaPredicted RBP8.36□□□□□ -1.07
R3HDM2-214ENST00000552428 EHHADHQ08426 723 aa8.36□□□□□ -1.07
R3HDM2-214ENST00000552428 NAALADL2Q58DX5 795 aa8.36□□□□□ -1.07
R3HDM2-214ENST00000552428 POTEAQ6S8J7 498 aa8.36□□□□□ -1.07
R3HDM2-214ENST00000552428 CCDC116Q8IYX3 515 aa8.36□□□□□ -1.07
R3HDM2-214ENST00000552428 QTRT2Q9H974 415 aaKnown RBP8.36□□□□□ -1.07
R3HDM2-214ENST00000552428 CCDC87Q9NVE4 849 aa8.36□□□□□ -1.07
R3HDM2-214ENST00000552428 GGCXP38435 758 aa8.35□□□□□ -1.07
R3HDM2-214ENST00000552428 AAMPQ13685 434 aa8.35□□□□□ -1.07
R3HDM2-214ENST00000552428 PLA2G2CQ5R387 149 aa8.35□□□□□ -1.07
R3HDM2-214ENST00000552428 CHMP3Q9Y3E7 222 aa8.35□□□□□ -1.07
R3HDM2-214ENST00000552428 GPR182O15218 404 aa8.34□□□□□ -1.07
R3HDM2-214ENST00000552428 MAPK8P45983 427 aa8.34□□□□□ -1.07
R3HDM2-214ENST00000552428 HDLBPQ00341 1268 aaKnown RBP8.34□□□□□ -1.07
R3HDM2-214ENST00000552428 NR5A1Q13285 461 aa8.34□□□□□ -1.07
R3HDM2-214ENST00000552428 LDLRAD1Q5T700 205 aa8.34□□□□□ -1.07
R3HDM2-214ENST00000552428 TMC4Q7Z404 712 aa8.34□□□□□ -1.07
R3HDM2-214ENST00000552428 MRS2Q9HD23 443 aa8.34□□□□□ -1.07
R3HDM2-214ENST00000552428 PARP2Q9UGN5 583 aa8.34□□□□□ -1.07
R3HDM2-214ENST00000552428 CDK2AP1O14519 115 aa8.33□□□□□ -1.08
R3HDM2-214ENST00000552428 ADH1CP00326 375 aa8.33□□□□□ -1.08
R3HDM2-214ENST00000552428 HIRAP54198 1017 aaPredicted RBP8.33□□□□□ -1.08
R3HDM2-214ENST00000552428 DAB2P98082 770 aa8.33□□□□□ -1.08
R3HDM2-214ENST00000552428 ATP2B2Q01814 1243 aa8.33□□□□□ -1.08
R3HDM2-214ENST00000552428 TBCELQ5QJ74 424 aa8.33□□□□□ -1.08
R3HDM2-214ENST00000552428 PPP1R26Q5T8A7 1209 aaPredicted RBP8.33□□□□□ -1.08
R3HDM2-214ENST00000552428 RC3H1Q5TC82 1133 aaKnown RBP8.33□□□□□ -1.08
R3HDM2-214ENST00000552428 NBPF15Q8N660 670 aa8.33□□□□□ -1.08
R3HDM2-214ENST00000552428 UBXN4Q92575 508 aa8.33□□□□□ -1.08
R3HDM2-214ENST00000552428 XAGE2Q96GT9 111 aa8.33□□□□□ -1.08
R3HDM2-214ENST00000552428 DUSP9Q99956 384 aaKnown RBP8.33□□□□□ -1.08
R3HDM2-214ENST00000552428 LRFN2Q9ULH4 789 aa8.33□□□□□ -1.08
R3HDM2-214ENST00000552428 TLL2Q9Y6L7 1015 aa8.33□□□□□ -1.08
R3HDM2-214ENST00000552428 SORBS3O60504 671 aa8.32□□□□□ -1.08
R3HDM2-214ENST00000552428 HMGB1P09429 215 aaKnown RBP8.32□□□□□ -1.08
R3HDM2-214ENST00000552428 BRD2P25440 801 aaKnown RBP8.32□□□□□ -1.08
R3HDM2-214ENST00000552428 METTL5Q9NRN9 209 aaKnown RBP8.32□□□□□ -1.08
R3HDM2-214ENST00000552428 IQSEC3Q9UPP2 1182 aaPredicted RBP8.32□□□□□ -1.08
R3HDM2-214ENST00000552428 IL2RAP01589 272 aa8.31□□□□□ -1.08
R3HDM2-214ENST00000552428 USP5P45974 858 aa8.31□□□□□ -1.08
R3HDM2-214ENST00000552428 KCNC4Q03721 635 aa8.31□□□□□ -1.08
R3HDM2-214ENST00000552428 TLR1Q15399 786 aa8.31□□□□□ -1.08
R3HDM2-214ENST00000552428 GJD3Q8N144 294 aa8.31□□□□□ -1.08
R3HDM2-214ENST00000552428 ARHGEF10LQ9HCE6 1279 aa8.31□□□□□ -1.08
R3HDM2-214ENST00000552428 RAB6BQ9NRW1 208 aa8.31□□□□□ -1.08
R3HDM2-214ENST00000552428 PGPEP1Q9NXJ5 209 aa8.31□□□□□ -1.08
R3HDM2-214ENST00000552428 SIAH2O43255 324 aa8.3□□□□□ -1.08
R3HDM2-214ENST00000552428 CD2BP2O95400 341 aaKnown RBP8.3□□□□□ -1.08
R3HDM2-214ENST00000552428 ITGBL1O95965 494 aaPredicted RBP8.3□□□□□ -1.08
R3HDM2-214ENST00000552428 ADD1P35611 737 aaKnown RBP8.3□□□□□ -1.08
R3HDM2-214ENST00000552428 TEAD4Q15561 434 aa8.3□□□□□ -1.08
R3HDM2-214ENST00000552428 ENOX2Q16206 610 aaKnown RBP8.3□□□□□ -1.08
R3HDM2-214ENST00000552428 ALG1LQ6GMV1 187 aa8.3□□□□□ -1.08
R3HDM2-214ENST00000552428 TMEM87AQ8NBN3 555 aa8.3□□□□□ -1.08
R3HDM2-214ENST00000552428 HRH3Q9Y5N1 445 aa8.3□□□□□ -1.08
R3HDM2-214ENST00000552428 USP3Q9Y6I4 520 aa8.3□□□□□ -1.08
R3HDM2-214ENST00000552428 SERTM1A2A2V5 107 aa8.29□□□□□ -1.08
R3HDM2-214ENST00000552428 EML1O00423 815 aa8.29□□□□□ -1.08
R3HDM2-214ENST00000552428 ZBTB39O15060 712 aa8.29□□□□□ -1.08
R3HDM2-214ENST00000552428 MZF1P28698 734 aaPredicted RBP8.29□□□□□ -1.08
R3HDM2-214ENST00000552428 RAD51AP2Q09MP3 1159 aa8.29□□□□□ -1.08
R3HDM2-214ENST00000552428 PSMD2Q13200 908 aa8.29□□□□□ -1.08
R3HDM2-214ENST00000552428 PIK3R5Q8WYR1 880 aa8.29□□□□□ -1.08
R3HDM2-214ENST00000552428 FAM161BQ96MY7 647 aa8.29□□□□□ -1.08
R3HDM2-214ENST00000552428 PUS7Q96PZ0 661 aaKnown RBP8.29□□□□□ -1.08
R3HDM2-214ENST00000552428 ESYT1Q9BSJ8 1104 aa8.29□□□□□ -1.08
R3HDM2-214ENST00000552428 EMILIN1Q9Y6C2 1016 aa8.29□□□□□ -1.08
R3HDM2-214ENST00000552428 RTN1Q16799 776 aa8.28□□□□□ -1.08
R3HDM2-214ENST00000552428 METTL16Q86W50 562 aaKnown RBP8.28□□□□□ -1.08
R3HDM2-214ENST00000552428 CNKSR1Q969H4 720 aa8.28□□□□□ -1.08
R3HDM2-214ENST00000552428 VTI1BQ9UEU0 232 aa8.28□□□□□ -1.08
R3HDM2-214ENST00000552428 POLIQ9UNA4 740 aa8.28□□□□□ -1.08
R3HDM2-214ENST00000552428 FANCIQ9NVI1 1328 aa8.28□□□□□ -1.08
R3HDM2-214ENST00000552428 PNMA6FA0A0J9YX94 578 aa8.27□□□□□ -1.09
R3HDM2-214ENST00000552428 ADH1AP07327 375 aa8.27□□□□□ -1.09
R3HDM2-214ENST00000552428 HSP90B1P14625 803 aaKnown RBP8.27□□□□□ -1.09
R3HDM2-214ENST00000552428 FANCCQ00597 558 aa8.27□□□□□ -1.09
R3HDM2-214ENST00000552428 C11orf91Q3C1V1 193 aa8.27□□□□□ -1.09
R3HDM2-214ENST00000552428 FAM26DQ5JW98 314 aa8.27□□□□□ -1.09
R3HDM2-214ENST00000552428 ATCAYQ86WG3 371 aa8.27□□□□□ -1.09
R3HDM2-214ENST00000552428 NT5DC4Q86YG4 428 aa8.27□□□□□ -1.09
R3HDM2-214ENST00000552428 FAM177A1Q8N128 213 aaPredicted RBP8.27□□□□□ -1.09
R3HDM2-214ENST00000552428 FBF1Q8TES7 1133 aa8.27□□□□□ -1.09
R3HDM2-214ENST00000552428 RNF34Q969K3 372 aa8.27□□□□□ -1.09
R3HDM2-214ENST00000552428 NIF3L1Q9GZT8 377 aa8.27□□□□□ -1.09
R3HDM2-214ENST00000552428 WWC3Q9ULE0 1092 aa8.27□□□□□ -1.09
R3HDM2-214ENST00000552428 SUPT16HQ9Y5B9 1047 aaKnown RBP8.27□□□□□ -1.09
R3HDM2-214ENST00000552428 PDGFAP04085 211 aa8.26□□□□□ -1.09
R3HDM2-214ENST00000552428 NR3C2P08235 984 aa8.26□□□□□ -1.09
R3HDM2-214ENST00000552428 GNA15P30679 374 aa8.26□□□□□ -1.09
R3HDM2-214ENST00000552428 NOS2P35228 1153 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms