RNA–Protein interactions for RNA: ENST00000552352.1

RPH3A-223, Transcript of rabphilin 3A, humanhuman

TSL 3

Gene RPH3A, Length 2,535 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3A-223ENST00000552352 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.73□□□□□ -0.85
RPH3A-223ENST00000552352 PHF14O94880 888 aa9.73□□□□□ -0.85
RPH3A-223ENST00000552352 AMPHP49418 695 aa9.73□□□□□ -0.85
RPH3A-223ENST00000552352 NLRP6P59044 892 aa9.73□□□□□ -0.85
RPH3A-223ENST00000552352 C8orf58Q8NAV2 365 aa9.73□□□□□ -0.85
RPH3A-223ENST00000552352 PRIMPOLQ96LW4 560 aa9.73□□□□□ -0.85
RPH3A-223ENST00000552352 LTN1O94822 1766 aa9.72□□□□□ -0.85
RPH3A-223ENST00000552352 CEP85Q6P2H3 762 aa9.72□□□□□ -0.85
RPH3A-223ENST00000552352 KCNH5Q8NCM2 988 aa9.72□□□□□ -0.85
RPH3A-223ENST00000552352 TMX3Q96JJ7 454 aa9.72□□□□□ -0.85
RPH3A-223ENST00000552352 CHAMP1Q96JM3 812 aa9.72□□□□□ -0.85
RPH3A-223ENST00000552352 PLEKHG2Q9H7P9 1386 aa9.72□□□□□ -0.85
RPH3A-223ENST00000552352 CUL4AQ13619 759 aa9.72□□□□□ -0.85
RPH3A-223ENST00000552352 EYA1Q99502 592 aa9.72□□□□□ -0.85
RPH3A-223ENST00000552352 RGS12O14924 1447 aa9.71□□□□□ -0.85
RPH3A-223ENST00000552352 MED1Q15648 1581 aaPredicted RBP9.71□□□□□ -0.85
RPH3A-223ENST00000552352 GTF2F1P35269 517 aaKnown RBP eCLIP9.71□□□□□ -0.85
RPH3A-223ENST00000552352 HMGN5P82970 282 aaKnown RBP9.71□□□□□ -0.85
RPH3A-223ENST00000552352 UTP14CQ5TAP6 766 aaKnown RBP9.71□□□□□ -0.85
RPH3A-223ENST00000552352 FAM184AQ8NB25 1140 aa9.71□□□□□ -0.85
RPH3A-223ENST00000552352 ABCC6O95255 1503 aa9.71□□□□□ -0.86
RPH3A-223ENST00000552352 UVSSAQ2YD98 709 aa9.71□□□□□ -0.86
RPH3A-223ENST00000552352 PIBF1Q8WXW3 757 aa9.71□□□□□ -0.86
RPH3A-223ENST00000552352 IP6K1Q92551 441 aa9.71□□□□□ -0.86
RPH3A-223ENST00000552352 INTS4Q96HW7 963 aaKnown RBP9.71□□□□□ -0.86
RPH3A-223ENST00000552352 OSBPL3Q9H4L5 887 aa9.71□□□□□ -0.86
RPH3A-223ENST00000552352 PTPRCP08575 1304 aa9.7□□□□□ -0.86
RPH3A-223ENST00000552352 SMARCA5O60264 1052 aaPredicted RBP9.7□□□□□ -0.86
RPH3A-223ENST00000552352 NEK4P51957 841 aa9.7□□□□□ -0.86
RPH3A-223ENST00000552352 FOXD4L5Q5VV16 416 aaPredicted RBP9.7□□□□□ -0.86
RPH3A-223ENST00000552352 ABTB2Q8N961 1025 aa9.7□□□□□ -0.86
RPH3A-223ENST00000552352 FOXD4L4Q8WXT5 416 aaPredicted RBP9.7□□□□□ -0.86
RPH3A-223ENST00000552352 MSH6P52701 1360 aa9.7□□□□□ -0.86
RPH3A-223ENST00000552352 OVOS2A0A0G2JMS6 1433 aa9.7□□□□□ -0.86
RPH3A-223ENST00000552352 FAM83GA6ND36 823 aa9.7□□□□□ -0.86
RPH3A-223ENST00000552352 DMTNQ08495 405 aa9.7□□□□□ -0.86
RPH3A-223ENST00000552352 DNTTIP2Q5QJE6 756 aaKnown RBP9.7□□□□□ -0.86
RPH3A-223ENST00000552352 ARID3AQ99856 593 aa9.7□□□□□ -0.86
RPH3A-223ENST00000552352 C1orf167Q5SNV9 1468 aa9.69□□□□□ -0.86
RPH3A-223ENST00000552352 ALS2Q96Q42 1657 aa9.69□□□□□ -0.86
RPH3A-223ENST00000552352 MTHFSDQ2M296 383 aaKnown RBP9.69□□□□□ -0.86
RPH3A-223ENST00000552352 MAP3K5Q99683 1374 aa9.69□□□□□ -0.86
RPH3A-223ENST00000552352 ZNF219Q9P2Y4 722 aaPredicted RBP9.68□□□□□ -0.86
RPH3A-223ENST00000552352 LMO7Q8WWI1 1683 aa9.68□□□□□ -0.86
RPH3A-223ENST00000552352 N4BP2Q86UW6 1770 aaPredicted RBP9.68□□□□□ -0.86
RPH3A-223ENST00000552352 MCCP23508 829 aa9.68□□□□□ -0.86
RPH3A-223ENST00000552352 ANAPC15P60006 121 aa9.68□□□□□ -0.86
RPH3A-223ENST00000552352 NOLC1Q14978 699 aaKnown RBP eCLIP9.68□□□□□ -0.86
RPH3A-223ENST00000552352 RTF1Q92541 710 aaKnown RBP9.68□□□□□ -0.86
RPH3A-223ENST00000552352 TUBGCP6Q96RT7 1819 aa9.68□□□□□ -0.86
RPH3A-223ENST00000552352 APBB1O00213 710 aa9.67□□□□□ -0.86
RPH3A-223ENST00000552352 PLCB2Q00722 1185 aa9.67□□□□□ -0.86
RPH3A-223ENST00000552352 ZNF710Q8N1W2 664 aa9.67□□□□□ -0.86
RPH3A-223ENST00000552352 PRDM10Q9NQV6 1147 aa9.67□□□□□ -0.86
RPH3A-223ENST00000552352 SPTLC3Q9NUV7 552 aa9.67□□□□□ -0.86
RPH3A-223ENST00000552352 CEMIPQ8WUJ3 1361 aa9.67□□□□□ -0.86
RPH3A-223ENST00000552352 FAM208AQ9UK61 1670 aaKnown RBP9.67□□□□□ -0.86
RPH3A-223ENST00000552352 HMMRO75330 724 aa9.67□□□□□ -0.86
RPH3A-223ENST00000552352 ZSCAN20P17040 1043 aaPredicted RBP9.67□□□□□ -0.86
RPH3A-223ENST00000552352 PDE1AP54750 535 aa9.67□□□□□ -0.86
RPH3A-223ENST00000552352 IL17RAQ96F46 866 aa9.67□□□□□ -0.86
RPH3A-223ENST00000552352 ESYT1Q9BSJ8 1104 aa9.67□□□□□ -0.86
RPH3A-223ENST00000552352 RNF39Q9H2S5 420 aa9.67□□□□□ -0.86
RPH3A-223ENST00000552352 C19orf44Q9H6X5 657 aa9.67□□□□□ -0.86
RPH3A-223ENST00000552352 FKBP5Q13451 457 aaPredicted RBP9.66□□□□□ -0.86
RPH3A-223ENST00000552352 DCTN1Q14203 1278 aa9.66□□□□□ -0.86
RPH3A-223ENST00000552352 TMEM87AQ8NBN3 555 aa9.66□□□□□ -0.86
RPH3A-223ENST00000552352 WDR33Q9C0J8 1336 aaKnown RBP9.66□□□□□ -0.86
RPH3A-223ENST00000552352 CACNA1FO60840 1977 aa9.66□□□□□ -0.86
RPH3A-223ENST00000552352 GNAT3A8MTJ3 354 aa9.66□□□□□ -0.86
RPH3A-223ENST00000552352 GADD45BO75293 160 aaPredicted RBP9.66□□□□□ -0.86
RPH3A-223ENST00000552352 LETM1O95202 739 aaPredicted RBP9.66□□□□□ -0.86
RPH3A-223ENST00000552352 PSME1Q06323 249 aa9.66□□□□□ -0.86
RPH3A-223ENST00000552352 ESCO1Q5FWF5 840 aa9.66□□□□□ -0.86
RPH3A-223ENST00000552352 CCDC183Q5T5S1 534 aa9.66□□□□□ -0.86
RPH3A-223ENST00000552352 MCM10Q7L590 875 aa9.66□□□□□ -0.86
RPH3A-223ENST00000552352 USP48Q86UV5 1035 aa9.66□□□□□ -0.86
RPH3A-223ENST00000552352 MEIS3Q99687 375 aa9.66□□□□□ -0.86
RPH3A-223ENST00000552352 USP25Q9UHP3 1055 aa9.66□□□□□ -0.86
RPH3A-223ENST00000552352 PXDNLA1KZ92 1463 aa9.66□□□□□ -0.86
RPH3A-223ENST00000552352 ADAMTS7Q9UKP4 1686 aa9.66□□□□□ -0.86
RPH3A-223ENST00000552352 KIF3AQ9Y496 699 aa9.65□□□□□ -0.86
RPH3A-223ENST00000552352 ADCY5O95622 1261 aa9.65□□□□□ -0.86
RPH3A-223ENST00000552352 ARHGEF25Q86VW2 580 aa9.65□□□□□ -0.86
RPH3A-223ENST00000552352 PALD1Q9ULE6 856 aa9.65□□□□□ -0.86
RPH3A-223ENST00000552352 SALL3Q9BXA9 1300 aa9.65□□□□□ -0.87
RPH3A-223ENST00000552352 ZNF830Q96NB3 372 aaPredicted RBP9.64□□□□□ -0.87
RPH3A-223ENST00000552352 CHMP4AQ9BY43 222 aa9.64□□□□□ -0.87
RPH3A-223ENST00000552352 GTPBP4Q9BZE4 634 aaKnown RBP9.64□□□□□ -0.87
RPH3A-223ENST00000552352 KDM3BQ7LBC6 1761 aa9.64□□□□□ -0.87
RPH3A-223ENST00000552352 STRCP1A6NGW2 1772 aa9.64□□□□□ -0.87
RPH3A-223ENST00000552352 RPAP1Q9BWH6 1393 aaPredicted RBP9.64□□□□□ -0.87
RPH3A-223ENST00000552352 HOXB7P09629 217 aa9.64□□□□□ -0.87
RPH3A-223ENST00000552352 KRT24Q2M2I5 525 aa9.64□□□□□ -0.87
RPH3A-223ENST00000552352 PROSER2Q86WR7 435 aaPredicted RBP9.64□□□□□ -0.87
RPH3A-223ENST00000552352 JARID2Q92833 1246 aaPredicted RBP9.64□□□□□ -0.87
RPH3A-223ENST00000552352 TTC12Q9H892 705 aaPredicted RBP9.64□□□□□ -0.87
RPH3A-223ENST00000552352 GDPD2Q9HCC8 539 aa9.64□□□□□ -0.87
RPH3A-223ENST00000552352 TSPYL4Q9UJ04 414 aa9.64□□□□□ -0.87
RPH3A-223ENST00000552352 ZHX1Q9UKY1 873 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms