RNA–Protein interactions for RNA: ENST00000552294.1

CTDSP2-208, Transcript of CTD small phosphatase 2, humanhuman

TSL 5

Gene CTDSP2, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-208ENST00000552294 FOXN1O15353 648 aa9.45□□□□□ -0.9
CTDSP2-208ENST00000552294 CABP4P57796 275 aa9.45□□□□□ -0.9
CTDSP2-208ENST00000552294 MKRN1Q9UHC7 482 aaKnown RBP9.45□□□□□ -0.9
CTDSP2-208ENST00000552294 ZBTB1Q9Y2K1 713 aa9.45□□□□□ -0.9
CTDSP2-208ENST00000552294 SOS1Q07889 1333 aaPredicted RBP9.45□□□□□ -0.9
CTDSP2-208ENST00000552294 PLEKHG2Q9H7P9 1386 aa9.45□□□□□ -0.9
CTDSP2-208ENST00000552294 GLTPD2A6NH11 291 aa9.44□□□□□ -0.9
CTDSP2-208ENST00000552294 CYP19A1P11511 503 aaPredicted RBP9.44□□□□□ -0.9
CTDSP2-208ENST00000552294 SMC1BQ8NDV3 1235 aa9.44□□□□□ -0.9
CTDSP2-208ENST00000552294 KDM2BQ8NHM5 1336 aa9.44□□□□□ -0.9
CTDSP2-208ENST00000552294 TNRC6CQ9HCJ0 1690 aaKnown RBP9.44□□□□□ -0.9
CTDSP2-208ENST00000552294 AFDNP55196 1824 aaKnown RBP9.43□□□□□ -0.9
CTDSP2-208ENST00000552294 MTHFSP49914 203 aa9.43□□□□□ -0.9
CTDSP2-208ENST00000552294 OLFM4Q6UX06 510 aa9.43□□□□□ -0.9
CTDSP2-208ENST00000552294 BICDL1Q6ZP65 573 aa9.43□□□□□ -0.9
CTDSP2-208ENST00000552294 TIAM2Q8IVF5 1701 aa9.42□□□□□ -0.9
CTDSP2-208ENST00000552294 NRXN2Q9P2S2 1712 aa9.42□□□□□ -0.9
CTDSP2-208ENST00000552294 DDNO94850 711 aaPredicted RBP9.42□□□□□ -0.9
CTDSP2-208ENST00000552294 SERPINB2P05120 415 aa9.42□□□□□ -0.9
CTDSP2-208ENST00000552294 LMNB1P20700 586 aa9.42□□□□□ -0.9
CTDSP2-208ENST00000552294 FMR1Q06787 632 aaKnown RBP eCLIP9.42□□□□□ -0.9
CTDSP2-208ENST00000552294 PLEKHO1Q53GL0 409 aaPredicted RBP9.42□□□□□ -0.9
CTDSP2-208ENST00000552294 C2CD5Q86YS7 1000 aa9.42□□□□□ -0.9
CTDSP2-208ENST00000552294 POLR3GLQ9BT43 218 aa9.42□□□□□ -0.9
CTDSP2-208ENST00000552294 C21orf2O43822 256 aa9.41□□□□□ -0.9
CTDSP2-208ENST00000552294 VEGFAP15692 232 aaPredicted RBP9.41□□□□□ -0.9
CTDSP2-208ENST00000552294 IL13P35225 146 aa9.41□□□□□ -0.9
CTDSP2-208ENST00000552294 TBC1D9BQ66K14 1250 aa9.41□□□□□ -0.9
CTDSP2-208ENST00000552294 SULT6B1Q6IMI4 303 aa9.41□□□□□ -0.9
CTDSP2-208ENST00000552294 COL11A2P13942 1736 aaPredicted RBP9.41□□□□□ -0.9
CTDSP2-208ENST00000552294 ANKRD31Q8N7Z5 1873 aa9.4□□□□□ -0.9
CTDSP2-208ENST00000552294 COL15A1P39059 1388 aa9.4□□□□□ -0.9
CTDSP2-208ENST00000552294 NARFQ9UHQ1 456 aa9.4□□□□□ -0.9
CTDSP2-208ENST00000552294 TNRC18O15417 2968 aaPredicted RBP9.39□□□□□ -0.91
CTDSP2-208ENST00000552294 RNMTO43148 476 aaKnown RBP9.39□□□□□ -0.91
CTDSP2-208ENST00000552294 CANXP27824 592 aaKnown RBP9.39□□□□□ -0.91
CTDSP2-208ENST00000552294 PIP4K2AP48426 406 aaPredicted RBP9.39□□□□□ -0.91
CTDSP2-208ENST00000552294 TTLL6Q8N841 843 aa9.39□□□□□ -0.91
CTDSP2-208ENST00000552294 PANK3Q9H999 370 aa9.39□□□□□ -0.91
CTDSP2-208ENST00000552294 SLC52A2Q9HAB3 445 aa9.39□□□□□ -0.91
CTDSP2-208ENST00000552294 DLEC1Q9Y238 1755 aa9.39□□□□□ -0.91
CTDSP2-208ENST00000552294 PASKQ96RG2 1323 aa9.38□□□□□ -0.91
CTDSP2-208ENST00000552294 KCNQ3O43525 872 aa9.38□□□□□ -0.91
CTDSP2-208ENST00000552294 ZPR1O75312 459 aa9.38□□□□□ -0.91
CTDSP2-208ENST00000552294 ITGBL1O95965 494 aaPredicted RBP9.38□□□□□ -0.91
CTDSP2-208ENST00000552294 HMOX1P09601 288 aa9.38□□□□□ -0.91
CTDSP2-208ENST00000552294 VEGFBP49765 207 aa9.38□□□□□ -0.91
CTDSP2-208ENST00000552294 MTHFSDQ2M296 383 aaKnown RBP9.38□□□□□ -0.91
CTDSP2-208ENST00000552294 PRR5LQ6MZQ0 368 aa9.38□□□□□ -0.91
CTDSP2-208ENST00000552294 TBC1D2BQ9UPU7 963 aa9.38□□□□□ -0.91
CTDSP2-208ENST00000552294 CCDC88AQ3V6T2 1871 aa9.38□□□□□ -0.91
CTDSP2-208ENST00000552294 ZNF541Q9H0D2 1346 aa9.37□□□□□ -0.91
CTDSP2-208ENST00000552294 MRC1P22897 1456 aa9.37□□□□□ -0.91
CTDSP2-208ENST00000552294 PRAMEF22A3QJZ6 481 aa9.37□□□□□ -0.91
CTDSP2-208ENST00000552294 ZNF622Q969S3 477 aaKnown RBP eCLIP9.37□□□□□ -0.91
CTDSP2-208ENST00000552294 SCN11AQ9UI33 1791 aa9.37□□□□□ -0.91
CTDSP2-208ENST00000552294 CNTNAP1P78357 1384 aa9.37□□□□□ -0.91
CTDSP2-208ENST00000552294 COL4A5P29400 1685 aa9.36□□□□□ -0.91
CTDSP2-208ENST00000552294 SLX4Q8IY92 1834 aa9.36□□□□□ -0.91
CTDSP2-208ENST00000552294 HSP90AB1P08238 724 aaKnown RBP9.36□□□□□ -0.91
CTDSP2-208ENST00000552294 HMGB2P26583 209 aaKnown RBP9.36□□□□□ -0.91
CTDSP2-208ENST00000552294 LBX1P52954 281 aa9.36□□□□□ -0.91
CTDSP2-208ENST00000552294 EIF5P55010 431 aaKnown RBP9.36□□□□□ -0.91
CTDSP2-208ENST00000552294 ERFEQ4G0M1 354 aa9.36□□□□□ -0.91
CTDSP2-208ENST00000552294 AMOTQ4VCS5 1084 aa9.36□□□□□ -0.91
CTDSP2-208ENST00000552294 C1orf141Q5JVX7 400 aa9.36□□□□□ -0.91
CTDSP2-208ENST00000552294 CHADLQ6NUI6 762 aa9.36□□□□□ -0.91
CTDSP2-208ENST00000552294 C7orf43Q8WVR3 580 aa9.36□□□□□ -0.91
CTDSP2-208ENST00000552294 ZNF496Q96IT1 587 aaPredicted RBP9.36□□□□□ -0.91
CTDSP2-208ENST00000552294 H0YIN7 160 aa9.35□□□□□ -0.91
CTDSP2-208ENST00000552294 SLC34A2O95436 690 aa9.35□□□□□ -0.91
CTDSP2-208ENST00000552294 A1BGP04217 495 aa9.35□□□□□ -0.91
CTDSP2-208ENST00000552294 CREBZFQ9NS37 354 aa9.35□□□□□ -0.91
CTDSP2-208ENST00000552294 ZC3H4Q9UPT8 1303 aaKnown RBP9.34□□□□□ -0.91
CTDSP2-208ENST00000552294 FER1L6Q2WGJ9 1857 aa9.34□□□□□ -0.91
CTDSP2-208ENST00000552294 CAMTA2O94983 1202 aa9.34□□□□□ -0.91
CTDSP2-208ENST00000552294 HSPA5P11021 654 aaKnown RBP9.34□□□□□ -0.91
CTDSP2-208ENST00000552294 FAM161AQ3B820 660 aa9.34□□□□□ -0.91
CTDSP2-208ENST00000552294 AKAP4Q5JQC9 854 aa9.34□□□□□ -0.91
CTDSP2-208ENST00000552294 IL17REQ8NFR9 667 aa9.34□□□□□ -0.91
CTDSP2-208ENST00000552294 TAF1DQ9H5J8 278 aaPredicted RBP9.34□□□□□ -0.91
CTDSP2-208ENST00000552294 HSPA8P11142 646 aaKnown RBP9.33□□□□□ -0.92
CTDSP2-208ENST00000552294 CDCA8Q53HL2 280 aa9.33□□□□□ -0.92
CTDSP2-208ENST00000552294 MAP1SQ66K74 1059 aaPredicted RBP9.33□□□□□ -0.92
CTDSP2-208ENST00000552294 PRPF40BQ6NWY9 871 aaKnown RBP9.33□□□□□ -0.92
CTDSP2-208ENST00000552294 MORC1Q86VD1 984 aa9.33□□□□□ -0.92
CTDSP2-208ENST00000552294 ZNF277Q9NRM2 450 aaPredicted RBP9.33□□□□□ -0.92
CTDSP2-208ENST00000552294 WBP1LQ9NX94 342 aa9.33□□□□□ -0.92
CTDSP2-208ENST00000552294 TSKSQ9UJT2 592 aa9.33□□□□□ -0.92
CTDSP2-208ENST00000552294 UBR2Q8IWV8 1755 aa9.32□□□□□ -0.92
CTDSP2-208ENST00000552294 ADAMTSL1Q8N6G6 1762 aa9.32□□□□□ -0.92
CTDSP2-208ENST00000552294 CACNA1SQ13698 1873 aa9.32□□□□□ -0.92
CTDSP2-208ENST00000552294 LTBP1Q14766 1721 aa9.32□□□□□ -0.92
CTDSP2-208ENST00000552294 SLC24A1O60721 1099 aa9.32□□□□□ -0.92
CTDSP2-208ENST00000552294 SRGNP10124 158 aa9.32□□□□□ -0.92
CTDSP2-208ENST00000552294 AMER1Q5JTC6 1135 aaPredicted RBP9.32□□□□□ -0.92
CTDSP2-208ENST00000552294 BRIP1Q9BX63 1249 aa9.32□□□□□ -0.92
CTDSP2-208ENST00000552294 ZNF330Q9Y3S2 320 aaPredicted RBP9.32□□□□□ -0.92
CTDSP2-208ENST00000552294 SNED1Q8TER0 1413 aa9.31□□□□□ -0.92
CTDSP2-208ENST00000552294 EAPPQ56P03 285 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms