RNA–Protein interactions for RNA: ENST00000551752.5

RBFOX1-213, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best)

Gene RBFOX1, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-213ENST00000551752 SIRT1Q96EB6 747 aa11.99□□□□□ -0.49
RBFOX1-213ENST00000551752 IRX2Q9BZI1 471 aaPredicted RBP11.99□□□□□ -0.49
RBFOX1-213ENST00000551752 SETD1AO15047 1707 aaKnown RBP11.97□□□□□ -0.49
RBFOX1-213ENST00000551752 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.97□□□□□ -0.49
RBFOX1-213ENST00000551752 ROBO1Q9Y6N7 1651 aa11.97□□□□□ -0.49
RBFOX1-213ENST00000551752 ADGRL3Q9HAR2 1447 aa11.97□□□□□ -0.49
RBFOX1-213ENST00000551752 LRRN4Q8WUT4 740 aa11.97□□□□□ -0.49
RBFOX1-213ENST00000551752 TECPR2O15040 1411 aa11.96□□□□□ -0.49
RBFOX1-213ENST00000551752 ABCC11Q96J66 1382 aa11.96□□□□□ -0.49
RBFOX1-213ENST00000551752 USP17L8P0C7I0 530 aa11.96□□□□□ -0.49
RBFOX1-213ENST00000551752 FOXC1Q12948 553 aa11.96□□□□□ -0.49
RBFOX1-213ENST00000551752 C14orf37Q86TY3 774 aa11.96□□□□□ -0.49
RBFOX1-213ENST00000551752 PDZRN3Q9UPQ7 1066 aa11.96□□□□□ -0.49
RBFOX1-213ENST00000551752 NRXN1Q9ULB1 1477 aa11.95□□□□□ -0.5
RBFOX1-213ENST00000551752 IFT172Q9UG01 1749 aa11.95□□□□□ -0.5
RBFOX1-213ENST00000551752 WNT7BP56706 349 aa11.95□□□□□ -0.5
RBFOX1-213ENST00000551752 MYOM2P54296 1465 aa11.95□□□□□ -0.5
RBFOX1-213ENST00000551752 PIK3C2GO75747 1445 aa11.94□□□□□ -0.5
RBFOX1-213ENST00000551752 AHDC1Q5TGY3 1603 aaPredicted RBP11.94□□□□□ -0.5
RBFOX1-213ENST00000551752 ADGRF5Q8IZF2 1346 aa11.94□□□□□ -0.5
RBFOX1-213ENST00000551752 MED1Q15648 1581 aaPredicted RBP11.94□□□□□ -0.5
RBFOX1-213ENST00000551752 GFRA3O60609 400 aa11.94□□□□□ -0.5
RBFOX1-213ENST00000551752 BAP1Q92560 729 aa11.94□□□□□ -0.5
RBFOX1-213ENST00000551752 C14orf93Q9H972 538 aaKnown RBP11.94□□□□□ -0.5
RBFOX1-213ENST00000551752 LRPPRCP42704 1394 aaKnown RBP11.93□□□□□ -0.5
RBFOX1-213ENST00000551752 JCADQ9P266 1359 aa11.93□□□□□ -0.5
RBFOX1-213ENST00000551752 TNFRSF10AO00220 468 aa11.93□□□□□ -0.5
RBFOX1-213ENST00000551752 RGL3Q3MIN7 710 aa11.93□□□□□ -0.5
RBFOX1-213ENST00000551752 LINC01559Q495D7 138 aa11.93□□□□□ -0.5
RBFOX1-213ENST00000551752 ARMC2Q8NEN0 867 aa11.93□□□□□ -0.5
RBFOX1-213ENST00000551752 MST1RQ04912 1400 aa11.93□□□□□ -0.5
RBFOX1-213ENST00000551752 LAPTM4AQ15012 233 aa11.92□□□□□ -0.5
RBFOX1-213ENST00000551752 TMEM132AQ24JP5 1023 aa11.92□□□□□ -0.5
RBFOX1-213ENST00000551752 BRINP3Q76B58 766 aa11.92□□□□□ -0.5
RBFOX1-213ENST00000551752 ROBO2Q9HCK4 1378 aa11.92□□□□□ -0.5
RBFOX1-213ENST00000551752 SPATA31A6Q5VVP1 1343 aa11.91□□□□□ -0.5
RBFOX1-213ENST00000551752 WNT7AO00755 349 aa11.91□□□□□ -0.5
RBFOX1-213ENST00000551752 GDF9O60383 454 aa11.91□□□□□ -0.5
RBFOX1-213ENST00000551752 SKOR1P84550 965 aa11.91□□□□□ -0.5
RBFOX1-213ENST00000551752 TRIM67Q6ZTA4 783 aa11.91□□□□□ -0.5
RBFOX1-213ENST00000551752 PKD2L1Q9P0L9 805 aa11.91□□□□□ -0.5
RBFOX1-213ENST00000551752 LAMC1P11047 1609 aa11.9□□□□□ -0.5
RBFOX1-213ENST00000551752 SOCS7O14512 581 aa11.9□□□□□ -0.5
RBFOX1-213ENST00000551752 ZEB1P37275 1124 aaPredicted RBP11.9□□□□□ -0.5
RBFOX1-213ENST00000551752 SH3BP2P78314 561 aa11.9□□□□□ -0.5
RBFOX1-213ENST00000551752 PRR20EP86478 221 aa11.9□□□□□ -0.5
RBFOX1-213ENST00000551752 PRR20CP86479 221 aa11.9□□□□□ -0.5
RBFOX1-213ENST00000551752 PRR20DP86480 221 aa11.9□□□□□ -0.5
RBFOX1-213ENST00000551752 PRR20BP86481 221 aa11.9□□□□□ -0.5
RBFOX1-213ENST00000551752 PRR20AP86496 221 aa11.9□□□□□ -0.5
RBFOX1-213ENST00000551752 NR6A1Q15406 480 aa11.9□□□□□ -0.5
RBFOX1-213ENST00000551752 RC3H1Q5TC82 1133 aaKnown RBP11.9□□□□□ -0.5
RBFOX1-213ENST00000551752 ZNF511Q8NB15 262 aa11.9□□□□□ -0.5
RBFOX1-213ENST00000551752 BANK1Q8NDB2 785 aa11.9□□□□□ -0.5
RBFOX1-213ENST00000551752 DHX57Q6P158 1386 aaKnown RBP11.9□□□□□ -0.5
RBFOX1-213ENST00000551752 PHLPP1O60346 1717 aa11.89□□□□□ -0.51
RBFOX1-213ENST00000551752 ILDR2Q71H61 639 aa11.89□□□□□ -0.51
RBFOX1-213ENST00000551752 LRRC59Q96AG4 307 aaKnown RBP11.89□□□□□ -0.51
RBFOX1-213ENST00000551752 COL16A1Q07092 1604 aaPredicted RBP11.89□□□□□ -0.51
RBFOX1-213ENST00000551752 KNDC1Q76NI1 1749 aa11.89□□□□□ -0.51
RBFOX1-213ENST00000551752 YTHDC2Q9H6S0 1430 aaKnown RBP11.88□□□□□ -0.51
RBFOX1-213ENST00000551752 NRG2O14511 850 aaPredicted RBP11.88□□□□□ -0.51
RBFOX1-213ENST00000551752 NBPF14Q5TI25 921 aa11.88□□□□□ -0.51
RBFOX1-213ENST00000551752 EHBP1Q8NDI1 1231 aa11.88□□□□□ -0.51
RBFOX1-213ENST00000551752 HMX1Q9NP08 348 aaPredicted RBP11.88□□□□□ -0.51
RBFOX1-213ENST00000551752 C1orf167Q5SNV9 1468 aa11.88□□□□□ -0.51
RBFOX1-213ENST00000551752 ASXL1Q8IXJ9 1541 aa11.87□□□□□ -0.51
RBFOX1-213ENST00000551752 NALCNQ8IZF0 1738 aa11.87□□□□□ -0.51
RBFOX1-213ENST00000551752 MRGPRX2Q96LB1 330 aa11.87□□□□□ -0.51
RBFOX1-213ENST00000551752 CDC42BPGQ6DT37 1551 aa11.87□□□□□ -0.51
RBFOX1-213ENST00000551752 AGERQ15109 404 aa11.86□□□□□ -0.51
RBFOX1-213ENST00000551752 CYP4X1Q8N118 509 aa11.86□□□□□ -0.51
RBFOX1-213ENST00000551752 PNMA1Q8ND90 353 aa11.86□□□□□ -0.51
RBFOX1-213ENST00000551752 NHSL1Q5SYE7 1610 aa11.86□□□□□ -0.51
RBFOX1-213ENST00000551752 DLC1Q96QB1 1528 aa11.86□□□□□ -0.51
RBFOX1-213ENST00000551752 SHPRHQ149N8 1683 aa11.85□□□□□ -0.51
RBFOX1-213ENST00000551752 FKBPLQ9UIM3 349 aa11.85□□□□□ -0.51
RBFOX1-213ENST00000551752 SOS2Q07890 1332 aaPredicted RBP11.85□□□□□ -0.51
RBFOX1-213ENST00000551752 TTC24A2A3L6 582 aaPredicted RBP11.84□□□□□ -0.51
RBFOX1-213ENST00000551752 CFAP70Q5T0N1 1121 aa11.84□□□□□ -0.51
RBFOX1-213ENST00000551752 EPS8L1Q8TE68 723 aa11.84□□□□□ -0.51
RBFOX1-213ENST00000551752 GPKOWQ92917 476 aaPredicted RBP eCLIP11.84□□□□□ -0.51
RBFOX1-213ENST00000551752 TMEM132EQ6IEE7 984 aa11.83□□□□□ -0.52
RBFOX1-213ENST00000551752 BPHLQ86WA6 291 aaPredicted RBP11.83□□□□□ -0.52
RBFOX1-213ENST00000551752 FOXJ1Q92949 421 aa11.83□□□□□ -0.52
RBFOX1-213ENST00000551752 VARSP26640 1264 aaKnown RBP11.82□□□□□ -0.52
RBFOX1-213ENST00000551752 SNIP1Q8TAD8 396 aaKnown RBP11.82□□□□□ -0.52
RBFOX1-213ENST00000551752 DCAF11Q8TEB1 546 aa11.82□□□□□ -0.52
RBFOX1-213ENST00000551752 RGS17Q9UGC6 210 aaPredicted RBP11.82□□□□□ -0.52
RBFOX1-213ENST00000551752 ADGRB1O14514 1584 aa11.82□□□□□ -0.52
RBFOX1-213ENST00000551752 NPHP3Q7Z494 1330 aa11.82□□□□□ -0.52
RBFOX1-213ENST00000551752 APBB1O00213 710 aa11.81□□□□□ -0.52
RBFOX1-213ENST00000551752 WAPLQ7Z5K2 1190 aa11.81□□□□□ -0.52
RBFOX1-213ENST00000551752 SNRKQ9NRH2 765 aa11.81□□□□□ -0.52
RBFOX1-213ENST00000551752 TOR4AQ9NXH8 423 aa11.81□□□□□ -0.52
RBFOX1-213ENST00000551752 ZC3H4Q9UPT8 1303 aaKnown RBP11.81□□□□□ -0.52
RBFOX1-213ENST00000551752 ZNF772Q68DY9 489 aaPredicted RBP11.8□□□□□ -0.52
RBFOX1-213ENST00000551752 Q6ZNB5 142 aa11.8□□□□□ -0.52
RBFOX1-213ENST00000551752 TRIM34Q9BYJ4 488 aa11.8□□□□□ -0.52
RBFOX1-213ENST00000551752 STK26Q9P289 416 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms