RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 WDR43Q15061 677 aaKnown RBP eCLIP25.08■■□□□ 1.61
DDX54-208ENST00000551344 CANXP27824 592 aaKnown RBP25.07■■□□□ 1.6
DDX54-208ENST00000551344 GPR162Q16538 588 aa25.07■■□□□ 1.6
DDX54-208ENST00000551344 PNISRQ8TF01 805 aaKnown RBP25.07■■□□□ 1.6
DDX54-208ENST00000551344 SRP68Q9UHB9 627 aaKnown RBP25.07■■□□□ 1.6
DDX54-208ENST00000551344 NARFQ9UHQ1 456 aa25.06■■□□□ 1.6
DDX54-208ENST00000551344 SNRPA1P09661 255 aaKnown RBP25.05■■□□□ 1.6
DDX54-208ENST00000551344 EIF5P55010 431 aaKnown RBP25.05■■□□□ 1.6
DDX54-208ENST00000551344 RIPK4P57078 832 aa25.05■■□□□ 1.6
DDX54-208ENST00000551344 PARP3Q9Y6F1 533 aa25.05■■□□□ 1.6
DDX54-208ENST00000551344 A0A087WZG4 1122 aa25.04■■□□□ 1.6
DDX54-208ENST00000551344 FKBP8Q14318 412 aa25.04■■□□□ 1.6
DDX54-208ENST00000551344 COL15A1P39059 1388 aa25.04■■□□□ 1.6
DDX54-208ENST00000551344 TMPOP42166 694 aaKnown RBP25.03■■□□□ 1.6
DDX54-208ENST00000551344 USPL1Q5W0Q7 1092 aa25.03■■□□□ 1.6
DDX54-208ENST00000551344 RUNDC1Q96C34 613 aa25.03■■□□□ 1.6
DDX54-208ENST00000551344 MIS18AQ9NYP9 233 aa25.03■■□□□ 1.6
DDX54-208ENST00000551344 ADAMTS8Q9UP79 889 aa25.03■■□□□ 1.6
DDX54-208ENST00000551344 USP16Q9Y5T5 823 aa25.03■■□□□ 1.6
DDX54-208ENST00000551344 IL6STP40189 918 aaPredicted RBP25.02■■□□□ 1.6
DDX54-208ENST00000551344 C4AP0C0L4 1744 aa25.01■■□□□ 1.59
DDX54-208ENST00000551344 A1BGP04217 495 aa25.01■■□□□ 1.59
DDX54-208ENST00000551344 YY1P25490 414 aa25.01■■□□□ 1.59
DDX54-208ENST00000551344 TM4SF1P30408 202 aa25.01■■□□□ 1.59
DDX54-208ENST00000551344 LMOD3Q0VAK6 560 aa25.01■■□□□ 1.59
DDX54-208ENST00000551344 PELP1Q8IZL8 1130 aaKnown RBP25.01■■□□□ 1.59
DDX54-208ENST00000551344 DLG5Q8TDM6 1919 aa25.01■■□□□ 1.59
DDX54-208ENST00000551344 NPM2Q86SE8 214 aaKnown RBP25■■□□□ 1.59
DDX54-208ENST00000551344 THUMPD2Q9BTF0 503 aaKnown RBP25■■□□□ 1.59
DDX54-208ENST00000551344 GRIN3BO60391 1043 aa24.99■■□□□ 1.59
DDX54-208ENST00000551344 TGFB2P61812 414 aa24.99■■□□□ 1.59
DDX54-208ENST00000551344 CCDC146Q8IYE0 955 aa24.99■■□□□ 1.59
DDX54-208ENST00000551344 PRAMEF22A3QJZ6 481 aa24.97■■□□□ 1.59
DDX54-208ENST00000551344 BCL2L12Q9HB09 334 aa24.97■■□□□ 1.59
DDX54-208ENST00000551344 BABAM1Q9NWV8 329 aa24.97■■□□□ 1.59
DDX54-208ENST00000551344 EIF4A1P60842 406 aaKnown RBP24.96■■□□□ 1.59
DDX54-208ENST00000551344 DDR1Q08345 913 aa24.96■■□□□ 1.59
DDX54-208ENST00000551344 UTRNP46939 3433 aa24.95■■□□□ 1.59
DDX54-208ENST00000551344 POLRMTO00411 1230 aaKnown RBP24.95■■□□□ 1.58
DDX54-208ENST00000551344 YBX3P16989 372 aaKnown RBP eCLIP24.95■■□□□ 1.581e-6■□□□□ 11
DDX54-208ENST00000551344 RRP7AQ9Y3A4 280 aaKnown RBP24.95■■□□□ 1.58
DDX54-208ENST00000551344 ZNF330Q9Y3S2 320 aaPredicted RBP24.95■■□□□ 1.58
DDX54-208ENST00000551344 GIGYF1O75420 1035 aaPredicted RBP24.94■■□□□ 1.58
DDX54-208ENST00000551344 NFIXQ14938 502 aa24.94■■□□□ 1.58
DDX54-208ENST00000551344 NEUROD2Q15784 382 aa24.94■■□□□ 1.58
DDX54-208ENST00000551344 TBC1D2BQ9UPU7 963 aa24.94■■□□□ 1.58
DDX54-208ENST00000551344 C10orf71Q711Q0 1435 aa24.93■■□□□ 1.58
DDX54-208ENST00000551344 ANP32CO43423 234 aa24.92■■□□□ 1.58
DDX54-208ENST00000551344 TSPYL4Q9UJ04 414 aa24.92■■□□□ 1.58
DDX54-208ENST00000551344 TRIM35Q9UPQ4 493 aa24.91■■□□□ 1.58
DDX54-208ENST00000551344 DZIP3Q86Y13 1208 aaKnown RBP24.9■■□□□ 1.58
DDX54-208ENST00000551344 A0A0G2JLW4 131 aa24.89■■□□□ 1.58
DDX54-208ENST00000551344 NBPF26B4DH59 902 aa24.89■■□□□ 1.58
DDX54-208ENST00000551344 SERPINB2P05120 415 aa24.89■■□□□ 1.58
DDX54-208ENST00000551344 PIP4K2AP48426 406 aaPredicted RBP24.89■■□□□ 1.58
DDX54-208ENST00000551344 NBPF10Q6P3W6 841 aaKnown RBP24.89■■□□□ 1.58
DDX54-208ENST00000551344 NBPF15Q8N660 670 aa24.89■■□□□ 1.58
DDX54-208ENST00000551344 KIF13BQ9NQT8 1826 aa24.89■■□□□ 1.57
DDX54-208ENST00000551344 CAMTA2O94983 1202 aa24.88■■□□□ 1.57
DDX54-208ENST00000551344 PXDNLA1KZ92 1463 aa24.88■■□□□ 1.57
DDX54-208ENST00000551344 KDM3BQ7LBC6 1761 aa24.88■■□□□ 1.57
DDX54-208ENST00000551344 GOLGB1Q14789 3259 aaKnown RBP24.87■■□□□ 1.57
DDX54-208ENST00000551344 DPEP1P16444 411 aa24.87■■□□□ 1.57
DDX54-208ENST00000551344 TBC1D9BQ66K14 1250 aa24.87■■□□□ 1.57
DDX54-208ENST00000551344 CLEC4GQ6UXB4 293 aa24.87■■□□□ 1.57
DDX54-208ENST00000551344 CHL1O00533 1208 aa24.86■■□□□ 1.57
DDX54-208ENST00000551344 RGL2O15211 777 aa24.86■■□□□ 1.57
DDX54-208ENST00000551344 CCDC184Q52MB2 194 aa24.86■■□□□ 1.57
DDX54-208ENST00000551344 BICDL1Q6ZP65 573 aa24.86■■□□□ 1.57
DDX54-208ENST00000551344 CHD4Q14839 1912 aa24.86■■□□□ 1.57
DDX54-208ENST00000551344 APAF1O14727 1248 aa24.85■■□□□ 1.57
DDX54-208ENST00000551344 KCNA3P22001 575 aa24.84■■□□□ 1.57
DDX54-208ENST00000551344 SETDB2Q96T68 719 aa24.84■■□□□ 1.57
DDX54-208ENST00000551344 WWC3Q9ULE0 1092 aa24.84■■□□□ 1.57
DDX54-208ENST00000551344 PIM2Q9P1W9 311 aa24.83■■□□□ 1.57
DDX54-208ENST00000551344 ZNF652Q9Y2D9 606 aa24.83■■□□□ 1.57
DDX54-208ENST00000551344 ERBB4Q15303 1308 aa24.82■■□□□ 1.56
DDX54-208ENST00000551344 BCS1LQ9Y276 419 aa24.81■■□□□ 1.56
DDX54-208ENST00000551344 LAS1LQ9Y4W2 734 aaKnown RBP24.81■■□□□ 1.56
DDX54-208ENST00000551344 CARMIL3Q8ND23 1372 aa24.8■■□□□ 1.56
DDX54-208ENST00000551344 CFAP44Q96MT7 982 aa24.8■■□□□ 1.56
DDX54-208ENST00000551344 MRS2Q9HD23 443 aa24.8■■□□□ 1.56
DDX54-208ENST00000551344 KIAA1551Q9HCM1 1747 aa24.79■■□□□ 1.56
DDX54-208ENST00000551344 CALD1Q05682 793 aaKnown RBP24.79■■□□□ 1.56
DDX54-208ENST00000551344 NRXN2Q9P2S2 1712 aa24.78■■□□□ 1.56
DDX54-208ENST00000551344 N4BP2Q86UW6 1770 aaPredicted RBP24.78■■□□□ 1.56
DDX54-208ENST00000551344 ERVV-1B6SEH8 477 aa24.78■■□□□ 1.56
DDX54-208ENST00000551344 CHRNA5P30532 468 aa24.78■■□□□ 1.56
DDX54-208ENST00000551344 SCN7AQ01118 1682 aa24.78■■□□□ 1.56
DDX54-208ENST00000551344 LAMB4A4D0S4 1761 aa24.77■■□□□ 1.56
DDX54-208ENST00000551344 EIF2S2P20042 333 aaKnown RBP24.77■■□□□ 1.56
DDX54-208ENST00000551344 DALRD3Q5D0E6 543 aaKnown RBP24.77■■□□□ 1.56
DDX54-208ENST00000551344 NGEFQ8N5V2 710 aa24.77■■□□□ 1.56
DDX54-208ENST00000551344 ZNF784Q8NCA9 323 aaPredicted RBP24.77■■□□□ 1.56
DDX54-208ENST00000551344 PDZRN3Q9UPQ7 1066 aa24.77■■□□□ 1.56
DDX54-208ENST00000551344 AFDNP55196 1824 aaKnown RBP24.77■■□□□ 1.56
DDX54-208ENST00000551344 MYL6BP14649 208 aa24.76■■□□□ 1.55
DDX54-208ENST00000551344 PRR5LQ6MZQ0 368 aa24.76■■□□□ 1.55
DDX54-208ENST00000551344 BRIP1Q9BX63 1249 aa24.76■■□□□ 1.55
DDX54-208ENST00000551344 H0YIN7 160 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms