RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 RFC4P35249 363 aa17.42■□□□□ 0.38
NPAS3-209ENST00000551008 DDR1Q08345 913 aa17.42■□□□□ 0.38
NPAS3-209ENST00000551008 TEFQ10587 303 aa17.42■□□□□ 0.38
NPAS3-209ENST00000551008 COL15A1P39059 1388 aa17.41■□□□□ 0.38
NPAS3-209ENST00000551008 BCORQ6W2J9 1755 aa17.41■□□□□ 0.38
NPAS3-209ENST00000551008 DCTN1Q14203 1278 aa17.41■□□□□ 0.38
NPAS3-209ENST00000551008 MCM10Q7L590 875 aa17.41■□□□□ 0.38
NPAS3-209ENST00000551008 PELP1Q8IZL8 1130 aaKnown RBP17.41■□□□□ 0.38
NPAS3-209ENST00000551008 NLGN1Q8N2Q7 840 aa17.41■□□□□ 0.38
NPAS3-209ENST00000551008 LAMB4A4D0S4 1761 aa17.4■□□□□ 0.38
NPAS3-209ENST00000551008 BCL2L12Q9HB09 334 aa17.4■□□□□ 0.38
NPAS3-209ENST00000551008 WWC3Q9ULE0 1092 aa17.39■□□□□ 0.37
NPAS3-209ENST00000551008 ARFGEF1Q9Y6D6 1849 aa17.39■□□□□ 0.37
NPAS3-209ENST00000551008 DLEC1Q9Y238 1755 aa17.38■□□□□ 0.37
NPAS3-209ENST00000551008 ANKRD31Q8N7Z5 1873 aa17.38■□□□□ 0.37
NPAS3-209ENST00000551008 TTC5Q8N0Z6 440 aa17.38■□□□□ 0.37
NPAS3-209ENST00000551008 ZNF784Q8NCA9 323 aaPredicted RBP17.38■□□□□ 0.37
NPAS3-209ENST00000551008 PRAMEF22A3QJZ6 481 aa17.37■□□□□ 0.37
NPAS3-209ENST00000551008 TM4SF1P30408 202 aa17.37■□□□□ 0.37
NPAS3-209ENST00000551008 EIF5P55010 431 aaKnown RBP17.37■□□□□ 0.37
NPAS3-209ENST00000551008 RALBP1Q15311 655 aa17.37■□□□□ 0.37
NPAS3-209ENST00000551008 USPL1Q5W0Q7 1092 aa17.37■□□□□ 0.37
NPAS3-209ENST00000551008 BTBD11A6QL63 1104 aa17.36■□□□□ 0.37
NPAS3-209ENST00000551008 POLRMTO00411 1230 aaKnown RBP17.36■□□□□ 0.37
NPAS3-209ENST00000551008 NARFQ9UHQ1 456 aa17.36■□□□□ 0.37
NPAS3-209ENST00000551008 HTATSF1O43719 755 aaKnown RBP17.35■□□□□ 0.37
NPAS3-209ENST00000551008 CANXP27824 592 aaKnown RBP17.35■□□□□ 0.37
NPAS3-209ENST00000551008 FMNL2Q96PY5 1086 aa17.35■□□□□ 0.37
NPAS3-209ENST00000551008 A1BGP04217 495 aa17.34■□□□□ 0.37
NPAS3-209ENST00000551008 KCNA3P22001 575 aa17.34■□□□□ 0.37
NPAS3-209ENST00000551008 NFIXQ14938 502 aa17.34■□□□□ 0.37
NPAS3-209ENST00000551008 MYBBP1AQ9BQG0 1328 aaKnown RBP17.34■□□□□ 0.37
NPAS3-209ENST00000551008 PARP3Q9Y6F1 533 aa17.34■□□□□ 0.37
NPAS3-209ENST00000551008 ADCY9O60503 1353 aa17.33■□□□□ 0.36
NPAS3-209ENST00000551008 A0A0G2JLW4 131 aa17.33■□□□□ 0.36
NPAS3-209ENST00000551008 GRIN3BO60391 1043 aa17.33■□□□□ 0.36
NPAS3-209ENST00000551008 STARD3NLO95772 234 aa17.33■□□□□ 0.36
NPAS3-209ENST00000551008 DPEP1P16444 411 aa17.33■□□□□ 0.36
NPAS3-209ENST00000551008 NFE2L2Q16236 605 aa17.33■□□□□ 0.36
NPAS3-209ENST00000551008 THUMPD2Q9BTF0 503 aaKnown RBP17.33■□□□□ 0.36
NPAS3-209ENST00000551008 USP16Q9Y5T5 823 aa17.33■□□□□ 0.36
NPAS3-209ENST00000551008 COL11A2P13942 1736 aaPredicted RBP17.33■□□□□ 0.36
NPAS3-209ENST00000551008 CARMIL3Q8ND23 1372 aa17.32■□□□□ 0.36
NPAS3-209ENST00000551008 TGFB2P61812 414 aa17.32■□□□□ 0.36
NPAS3-209ENST00000551008 RTF1Q92541 710 aaKnown RBP17.32■□□□□ 0.36
NPAS3-209ENST00000551008 ZPR1O75312 459 aa17.31■□□□□ 0.36
NPAS3-209ENST00000551008 PIP4K2AP48426 406 aaPredicted RBP17.31■□□□□ 0.36
NPAS3-209ENST00000551008 TEX13AQ9BXU3 409 aaPredicted RBP17.31■□□□□ 0.36
NPAS3-209ENST00000551008 MIS18AQ9NYP9 233 aa17.31■□□□□ 0.36
NPAS3-209ENST00000551008 IL6STP40189 918 aaPredicted RBP17.3■□□□□ 0.36
NPAS3-209ENST00000551008 SBF1O95248 1867 aa17.29■□□□□ 0.36
NPAS3-209ENST00000551008 NBPF26B4DH59 902 aa17.29■□□□□ 0.36
NPAS3-209ENST00000551008 TAF7Q15545 349 aaPredicted RBP17.29■□□□□ 0.36
NPAS3-209ENST00000551008 NBPF10Q6P3W6 841 aaKnown RBP17.29■□□□□ 0.36
NPAS3-209ENST00000551008 NBPF15Q8N660 670 aa17.29■□□□□ 0.36
NPAS3-209ENST00000551008 PRKRIP1Q9H875 184 aaPredicted RBP17.29■□□□□ 0.36
NPAS3-209ENST00000551008 CAMTA2O94983 1202 aa17.28■□□□□ 0.36
NPAS3-209ENST00000551008 POTEDQ86YR6 584 aa17.28■□□□□ 0.36
NPAS3-209ENST00000551008 TBC1D2BQ9UPU7 963 aa17.28■□□□□ 0.36
NPAS3-209ENST00000551008 SNRPA1P09661 255 aaKnown RBP17.27■□□□□ 0.36
NPAS3-209ENST00000551008 CHRNA5P30532 468 aa17.27■□□□□ 0.36
NPAS3-209ENST00000551008 TBC1D9BQ66K14 1250 aa17.27■□□□□ 0.36
NPAS3-209ENST00000551008 ATP10DQ9P241 1426 aa17.27■□□□□ 0.35
NPAS3-209ENST00000551008 NUP98P52948 1817 aa17.26■□□□□ 0.35
NPAS3-209ENST00000551008 SERPINB2P05120 415 aa17.26■□□□□ 0.35
NPAS3-209ENST00000551008 CACNA1SQ13698 1873 aa17.26■□□□□ 0.35
NPAS3-209ENST00000551008 MAPK8IP3Q9UPT6 1336 aa17.25■□□□□ 0.35
NPAS3-209ENST00000551008 A0A087WZG4 1122 aa17.25■□□□□ 0.35
NPAS3-209ENST00000551008 TMPOP42166 694 aaKnown RBP17.25■□□□□ 0.35
NPAS3-209ENST00000551008 EIF4A1P60842 406 aaKnown RBP17.25■□□□□ 0.35
NPAS3-209ENST00000551008 BCS1LQ9Y276 419 aa17.25■□□□□ 0.35
NPAS3-209ENST00000551008 ZNF330Q9Y3S2 320 aaPredicted RBP17.25■□□□□ 0.35
NPAS3-209ENST00000551008 NCBP3Q53F19 620 aaKnown RBP17.24■□□□□ 0.35
NPAS3-209ENST00000551008 CCDC146Q8IYE0 955 aa17.24■□□□□ 0.35
NPAS3-209ENST00000551008 ARFGEF2Q9Y6D5 1785 aa17.23■□□□□ 0.35
NPAS3-209ENST00000551008 CCDC88AQ3V6T2 1871 aa17.23■□□□□ 0.35
NPAS3-209ENST00000551008 GIGYF1O75420 1035 aaPredicted RBP17.23■□□□□ 0.35
NPAS3-209ENST00000551008 BICDL1Q6ZP65 573 aa17.23■□□□□ 0.35
NPAS3-209ENST00000551008 DZIP3Q86Y13 1208 aaKnown RBP17.23■□□□□ 0.35
NPAS3-209ENST00000551008 NEFMP07197 916 aa17.22■□□□□ 0.35
NPAS3-209ENST00000551008 PNNQ9H307 717 aaKnown RBP17.22■□□□□ 0.35
NPAS3-209ENST00000551008 RRP7AQ9Y3A4 280 aaKnown RBP17.22■□□□□ 0.35
NPAS3-209ENST00000551008 RIPK4P57078 832 aa17.21■□□□□ 0.35
NPAS3-209ENST00000551008 PRR5LQ6MZQ0 368 aa17.21■□□□□ 0.35
NPAS3-209ENST00000551008 PIM2Q9P1W9 311 aa17.21■□□□□ 0.35
NPAS3-209ENST00000551008 ADAMTS8Q9UP79 889 aa17.21■□□□□ 0.35
NPAS3-209ENST00000551008 TRIM35Q9UPQ4 493 aa17.21■□□□□ 0.35
NPAS3-209ENST00000551008 TNRC6CQ9HCJ0 1690 aaKnown RBP17.2■□□□□ 0.34
NPAS3-209ENST00000551008 SLX4Q8IY92 1834 aa17.2■□□□□ 0.34
NPAS3-209ENST00000551008 CCDC24Q8N4L8 307 aa17.2■□□□□ 0.34
NPAS3-209ENST00000551008 PNISRQ8TF01 805 aaKnown RBP17.2■□□□□ 0.34
NPAS3-209ENST00000551008 CNKSR2Q8WXI2 1034 aa17.2■□□□□ 0.34
NPAS3-209ENST00000551008 FER1L6Q2WGJ9 1857 aa17.19■□□□□ 0.34
NPAS3-209ENST00000551008 CCDC184Q52MB2 194 aa17.19■□□□□ 0.34
NPAS3-209ENST00000551008 DALRD3Q5D0E6 543 aaKnown RBP17.18■□□□□ 0.34
NPAS3-209ENST00000551008 LRP10Q7Z4F1 713 aa17.18■□□□□ 0.34
NPAS3-209ENST00000551008 RUNDC1Q96C34 613 aa17.18■□□□□ 0.34
NPAS3-209ENST00000551008 HLFQ16534 295 aa17.17■□□□□ 0.34
NPAS3-209ENST00000551008 ARHGAP27Q6ZUM4 889 aa17.17■□□□□ 0.34
NPAS3-209ENST00000551008 ANKRD36CQ5JPF3 1778 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms