RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 TERF2IPQ9NYB0 399 aa16.1■□□□□ 0.17
GPN3-208ENST00000550974 SPG7Q9UQ90 795 aa16.1■□□□□ 0.17
GPN3-208ENST00000550974 RTL1A6NKG5 1358 aa16.1■□□□□ 0.17
GPN3-208ENST00000550974 ECE1P42892 770 aa16.09■□□□□ 0.17
GPN3-208ENST00000550974 MAP1SQ66K74 1059 aaPredicted RBP16.09■□□□□ 0.17
GPN3-208ENST00000550974 CYP4F22Q6NT55 531 aa16.09■□□□□ 0.17
GPN3-208ENST00000550974 CNTROBQ8N137 903 aa16.09■□□□□ 0.17
GPN3-208ENST00000550974 A0A1W2PP64 1363 aa16.09■□□□□ 0.17
GPN3-208ENST00000550974 PDE4DIPQ5VU43 2346 aa16.08■□□□□ 0.17
GPN3-208ENST00000550974 C21orf2O43822 256 aa16.07■□□□□ 0.16
GPN3-208ENST00000550974 HSP90AB2PQ58FF8 381 aa16.07■□□□□ 0.16
GPN3-208ENST00000550974 H0YIN7 160 aa16.06■□□□□ 0.16
GPN3-208ENST00000550974 L3MBTL3Q96JM7 780 aaPredicted RBP16.05■□□□□ 0.16
GPN3-208ENST00000550974 THSD7BQ9C0I4 1608 aa16.05■□□□□ 0.16
GPN3-208ENST00000550974 AOC2O75106 756 aa16.04■□□□□ 0.16
GPN3-208ENST00000550974 CRKLP46109 303 aaKnown RBP16.04■□□□□ 0.16
GPN3-208ENST00000550974 USPL1Q5W0Q7 1092 aa16.04■□□□□ 0.16
GPN3-208ENST00000550974 ZNF622Q969S3 477 aaKnown RBP eCLIP16.04■□□□□ 0.16
GPN3-208ENST00000550974 TAOK3Q9H2K8 898 aa16.04■□□□□ 0.16
GPN3-208ENST00000550974 COL5A3P25940 1745 aaPredicted RBP16.03■□□□□ 0.16
GPN3-208ENST00000550974 LTBP1Q14766 1721 aa16.03■□□□□ 0.16
GPN3-208ENST00000550974 ZPR1O75312 459 aa16.03■□□□□ 0.16
GPN3-208ENST00000550974 PHKG2P15735 406 aa16.03■□□□□ 0.16
GPN3-208ENST00000550974 EPHX2P34913 555 aa16.03■□□□□ 0.16
GPN3-208ENST00000550974 IFNL2Q8IZJ0 200 aa16.03■□□□□ 0.16
GPN3-208ENST00000550974 DDX21Q9NR30 783 aaKnown RBP eCLIP16.03■□□□□ 0.16
GPN3-208ENST00000550974 HACL1Q9UJ83 578 aa16.03■□□□□ 0.16
GPN3-208ENST00000550974 INSRP06213 1382 aa16.02■□□□□ 0.16
GPN3-208ENST00000550974 CA12O43570 354 aa16.02■□□□□ 0.16
GPN3-208ENST00000550974 NFIXQ14938 502 aa16.02■□□□□ 0.16
GPN3-208ENST00000550974 GCC1Q96CN9 775 aa16.02■□□□□ 0.16
GPN3-208ENST00000550974 DICER1Q9UPY3 1922 aaKnown RBP16.02■□□□□ 0.15
GPN3-208ENST00000550974 DLEC1Q9Y238 1755 aa16.01■□□□□ 0.15
GPN3-208ENST00000550974 SERPINB2P05120 415 aa16.01■□□□□ 0.15
GPN3-208ENST00000550974 MAP2K2P36507 400 aa16.01■□□□□ 0.15
GPN3-208ENST00000550974 PNMA8AQ86V59 439 aaPredicted RBP16.01■□□□□ 0.15
GPN3-208ENST00000550974 SCN4AP35499 1836 aa16.01■□□□□ 0.15
GPN3-208ENST00000550974 ROCK2O75116 1388 aaKnown RBP16■□□□□ 0.15
GPN3-208ENST00000550974 LTBP3Q9NS15 1303 aa16■□□□□ 0.15
GPN3-208ENST00000550974 ZNF831Q5JPB2 1677 aa16■□□□□ 0.15
GPN3-208ENST00000550974 PTCD1O75127 700 aaKnown RBP16■□□□□ 0.15
GPN3-208ENST00000550974 FMR1Q06787 632 aaKnown RBP eCLIP16■□□□□ 0.15
GPN3-208ENST00000550974 MYH14Q7Z406 1995 aaKnown RBP16■□□□□ 0.15
GPN3-208ENST00000550974 CASP8AP2Q9UKL3 1982 aa16■□□□□ 0.15
GPN3-208ENST00000550974 CARMIL3Q8ND23 1372 aa15.99■□□□□ 0.15
GPN3-208ENST00000550974 HABP4Q5JVS0 413 aaKnown RBP15.98■□□□□ 0.15
GPN3-208ENST00000550974 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.98■□□□□ 0.15
GPN3-208ENST00000550974 ADAMTSL1Q8N6G6 1762 aa15.98■□□□□ 0.15
GPN3-208ENST00000550974 RNF123Q5XPI4 1314 aa15.97■□□□□ 0.15
GPN3-208ENST00000550974 GGNBP2Q9H3C7 697 aa15.97■□□□□ 0.15
GPN3-208ENST00000550974 FLT4P35916 1363 aa15.97■□□□□ 0.15
GPN3-208ENST00000550974 ZNF541Q9H0D2 1346 aa15.96■□□□□ 0.15
GPN3-208ENST00000550974 AFDNP55196 1824 aaKnown RBP15.96■□□□□ 0.15
GPN3-208ENST00000550974 INTS5Q6P9B9 1019 aaKnown RBP15.96■□□□□ 0.15
GPN3-208ENST00000550974 NBPF15Q8N660 670 aa15.96■□□□□ 0.15
GPN3-208ENST00000550974 TLL2Q9Y6L7 1015 aa15.96■□□□□ 0.15
GPN3-208ENST00000550974 FER1L6Q2WGJ9 1857 aa15.96■□□□□ 0.15
GPN3-208ENST00000550974 ERVV-2B6SEH9 535 aa15.95■□□□□ 0.14
GPN3-208ENST00000550974 CST9Q5W186 159 aa15.95■□□□□ 0.14
GPN3-208ENST00000550974 BRPF1P55201 1214 aaPredicted RBP15.94■□□□□ 0.14
GPN3-208ENST00000550974 NRXN2Q9P2S2 1712 aa15.94■□□□□ 0.14
GPN3-208ENST00000550974 CABP4P57796 275 aa15.93■□□□□ 0.14
GPN3-208ENST00000550974 CIAPIN1Q6FI81 312 aa15.93■□□□□ 0.14
GPN3-208ENST00000550974 BICDL1Q6ZP65 573 aa15.93■□□□□ 0.14
GPN3-208ENST00000550974 TRAF5O00463 557 aa15.92■□□□□ 0.14
GPN3-208ENST00000550974 PDE6BP35913 854 aa15.92■□□□□ 0.14
GPN3-208ENST00000550974 CCDC24Q8N4L8 307 aa15.92■□□□□ 0.14
GPN3-208ENST00000550974 L3MBTL2Q969R5 705 aa15.92■□□□□ 0.14
GPN3-208ENST00000550974 BCL2L12Q9HB09 334 aa15.92■□□□□ 0.14
GPN3-208ENST00000550974 NARFQ9UHQ1 456 aa15.92■□□□□ 0.14
GPN3-208ENST00000550974 TONSLQ96HA7 1378 aa15.91■□□□□ 0.14
GPN3-208ENST00000550974 DLL1O00548 723 aa15.91■□□□□ 0.14
GPN3-208ENST00000550974 FYB1O15117 783 aa15.91■□□□□ 0.14
GPN3-208ENST00000550974 ADAMTS7Q9UKP4 1686 aa15.91■□□□□ 0.14
GPN3-208ENST00000550974 NCAPD2Q15021 1401 aa15.91■□□□□ 0.14
GPN3-208ENST00000550974 SOGA3Q5TF21 947 aa15.9■□□□□ 0.14
GPN3-208ENST00000550974 EYA1Q99502 592 aa15.9■□□□□ 0.14
GPN3-208ENST00000550974 BRIP1Q9BX63 1249 aa15.9■□□□□ 0.14
GPN3-208ENST00000550974 PDZRN3Q9UPQ7 1066 aa15.9■□□□□ 0.14
GPN3-208ENST00000550974 SOS1Q07889 1333 aaPredicted RBP15.9■□□□□ 0.14
GPN3-208ENST00000550974 KIF24Q5T7B8 1368 aa15.89■□□□□ 0.13
GPN3-208ENST00000550974 PPM1GO15355 546 aaPredicted RBP15.89■□□□□ 0.13
GPN3-208ENST00000550974 PRPF40BQ6NWY9 871 aaKnown RBP15.89■□□□□ 0.13
GPN3-208ENST00000550974 SAPCD2Q86UD0 394 aa15.89■□□□□ 0.13
GPN3-208ENST00000550974 CNKSR1Q969H4 720 aa15.89■□□□□ 0.13
GPN3-208ENST00000550974 ZNF277Q9NRM2 450 aaPredicted RBP15.88■□□□□ 0.13
GPN3-208ENST00000550974 EMILIN1Q9Y6C2 1016 aa15.88■□□□□ 0.13
GPN3-208ENST00000550974 HSP90AB1P08238 724 aaKnown RBP15.87■□□□□ 0.13
GPN3-208ENST00000550974 DNAJC10Q8IXB1 793 aa15.87■□□□□ 0.13
GPN3-208ENST00000550974 FXR1P51114 621 aaKnown RBP eCLIP15.86■□□□□ 0.13
GPN3-208ENST00000550974 GPC2Q8N158 579 aa15.86■□□□□ 0.13
GPN3-208ENST00000550974 PUS7Q96PZ0 661 aaKnown RBP15.86■□□□□ 0.13
GPN3-208ENST00000550974 COL15A1P39059 1388 aa15.86■□□□□ 0.13
GPN3-208ENST00000550974 TJP1Q07157 1748 aa15.85■□□□□ 0.13
GPN3-208ENST00000550974 CELF2O95319 508 aaKnown RBP15.85■□□□□ 0.13
GPN3-208ENST00000550974 LMOD1P29536 600 aaPredicted RBP15.85■□□□□ 0.13
GPN3-208ENST00000550974 CCDC93Q567U6 631 aa15.85■□□□□ 0.13
GPN3-208ENST00000550974 STYK1Q6J9G0 422 aa15.85■□□□□ 0.13
GPN3-208ENST00000550974 NFATC2IPQ8NCF5 419 aa15.85■□□□□ 0.13
GPN3-208ENST00000550974 ZIC5Q96T25 663 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms