RNA–Protein interactions for RNA: ENST00000550798.1

PPFIA2-221, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 3

Gene PPFIA2, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-221ENST00000550798 PIM2Q9P1W9 311 aa15.72■□□□□ 0.11
PPFIA2-221ENST00000550798 NARFQ9UHQ1 456 aa15.72■□□□□ 0.11
PPFIA2-221ENST00000550798 COL15A1P39059 1388 aa15.72■□□□□ 0.11
PPFIA2-221ENST00000550798 POLRMTO00411 1230 aaKnown RBP15.71■□□□□ 0.11
PPFIA2-221ENST00000550798 TM4SF1P30408 202 aa15.71■□□□□ 0.11
PPFIA2-221ENST00000550798 ZBTB1Q9Y2K1 713 aa15.71■□□□□ 0.11
PPFIA2-221ENST00000550798 SIPA1L3O60292 1781 aaPredicted RBP15.71■□□□□ 0.11
PPFIA2-221ENST00000550798 AFDNP55196 1824 aaKnown RBP15.71■□□□□ 0.1
PPFIA2-221ENST00000550798 STARD3NLO95772 234 aa15.7■□□□□ 0.1
PPFIA2-221ENST00000550798 KCNA3P22001 575 aa15.7■□□□□ 0.1
PPFIA2-221ENST00000550798 CANXP27824 592 aaKnown RBP15.69■□□□□ 0.1
PPFIA2-221ENST00000550798 DALRD3Q5D0E6 543 aaKnown RBP15.69■□□□□ 0.1
PPFIA2-221ENST00000550798 IL17REQ8NFR9 667 aa15.69■□□□□ 0.1
PPFIA2-221ENST00000550798 NUDCQ9Y266 331 aa15.69■□□□□ 0.1
PPFIA2-221ENST00000550798 ZNF790Q6PG37 636 aa15.68■□□□□ 0.1
PPFIA2-221ENST00000550798 TEX13AQ9BXU3 409 aaPredicted RBP15.68■□□□□ 0.1
PPFIA2-221ENST00000550798 NRXN2Q9P2S2 1712 aa15.68■□□□□ 0.1
PPFIA2-221ENST00000550798 HEG1Q9ULI3 1381 aa15.67■□□□□ 0.1
PPFIA2-221ENST00000550798 A0A087WZG4 1122 aa15.67■□□□□ 0.1
PPFIA2-221ENST00000550798 PRKAR2BP31323 418 aa15.67■□□□□ 0.1
PPFIA2-221ENST00000550798 NFIXQ14938 502 aa15.67■□□□□ 0.1
PPFIA2-221ENST00000550798 ZNF496Q96IT1 587 aaPredicted RBP15.67■□□□□ 0.1
PPFIA2-221ENST00000550798 CHRNA5P30532 468 aa15.66■□□□□ 0.1
PPFIA2-221ENST00000550798 FMNL2Q96PY5 1086 aa15.66■□□□□ 0.1
PPFIA2-221ENST00000550798 RSPH6AQ9H0K4 717 aa15.66■□□□□ 0.1
PPFIA2-221ENST00000550798 CEMIPQ8WUJ3 1361 aa15.65■□□□□ 0.1
PPFIA2-221ENST00000550798 KIF3CO14782 793 aa15.65■□□□□ 0.1
PPFIA2-221ENST00000550798 SERPINB2P05120 415 aa15.65■□□□□ 0.1
PPFIA2-221ENST00000550798 EIF5P55010 431 aaKnown RBP15.65■□□□□ 0.1
PPFIA2-221ENST00000550798 PHACTR3Q96KR7 559 aa15.65■□□□□ 0.1
PPFIA2-221ENST00000550798 BCL2L12Q9HB09 334 aa15.65■□□□□ 0.1
PPFIA2-221ENST00000550798 DLEC1Q9Y238 1755 aa15.64■□□□□ 0.1
PPFIA2-221ENST00000550798 BTBD11A6QL63 1104 aa15.64■□□□□ 0.09
PPFIA2-221ENST00000550798 U2AF1L5P0DN76 240 aaPredicted RBP15.64■□□□□ 0.09
PPFIA2-221ENST00000550798 HSPA6P17066 643 aa15.64■□□□□ 0.09
PPFIA2-221ENST00000550798 PPP2R1AP30153 589 aa15.64■□□□□ 0.09
PPFIA2-221ENST00000550798 U2AF1Q01081 240 aaKnown RBP eCLIP15.64■□□□□ 0.09
PPFIA2-221ENST00000550798 C9orf131Q5VYM1 1079 aa15.64■□□□□ 0.09
PPFIA2-221ENST00000550798 NPM2Q86SE8 214 aaKnown RBP15.64■□□□□ 0.09
PPFIA2-221ENST00000550798 SBF1O95248 1867 aa15.63■□□□□ 0.09
PPFIA2-221ENST00000550798 RTF1Q92541 710 aaKnown RBP15.63■□□□□ 0.09
PPFIA2-221ENST00000550798 ZNF330Q9Y3S2 320 aaPredicted RBP15.63■□□□□ 0.09
PPFIA2-221ENST00000550798 SCN7AQ01118 1682 aa15.63■□□□□ 0.09
PPFIA2-221ENST00000550798 IL6STP40189 918 aaPredicted RBP15.62■□□□□ 0.09
PPFIA2-221ENST00000550798 BICDL1Q6ZP65 573 aa15.61■□□□□ 0.09
PPFIA2-221ENST00000550798 RNF181Q9P0P0 153 aa15.61■□□□□ 0.09
PPFIA2-221ENST00000550798 H0YIN7 160 aa15.6■□□□□ 0.09
PPFIA2-221ENST00000550798 TOMM70O94826 608 aa15.6■□□□□ 0.09
PPFIA2-221ENST00000550798 C2CD5Q86YS7 1000 aa15.6■□□□□ 0.09
PPFIA2-221ENST00000550798 TBC1D2BQ9UPU7 963 aa15.6■□□□□ 0.09
PPFIA2-221ENST00000550798 KCNQ3O43525 872 aa15.59■□□□□ 0.09
PPFIA2-221ENST00000550798 A1BGP04217 495 aa15.59■□□□□ 0.09
PPFIA2-221ENST00000550798 TBC1D9BQ66K14 1250 aa15.59■□□□□ 0.09
PPFIA2-221ENST00000550798 TTLL6Q8N841 843 aa15.59■□□□□ 0.09
PPFIA2-221ENST00000550798 NMRK2Q9NPI5 230 aa15.59■□□□□ 0.09
PPFIA2-221ENST00000550798 PDZRN3Q9UPQ7 1066 aa15.59■□□□□ 0.09
PPFIA2-221ENST00000550798 KDM2BQ8NHM5 1336 aa15.59■□□□□ 0.09
PPFIA2-221ENST00000550798 BCORQ6W2J9 1755 aa15.58■□□□□ 0.08
PPFIA2-221ENST00000550798 HTATSF1O43719 755 aaKnown RBP15.58■□□□□ 0.08
PPFIA2-221ENST00000550798 NEFMP07197 916 aa15.58■□□□□ 0.08
PPFIA2-221ENST00000550798 MCM10Q7L590 875 aa15.58■□□□□ 0.08
PPFIA2-221ENST00000550798 ANKRD31Q8N7Z5 1873 aa15.58■□□□□ 0.08
PPFIA2-221ENST00000550798 CARMIL3Q8ND23 1372 aa15.58■□□□□ 0.08
PPFIA2-221ENST00000550798 CCDC88AQ3V6T2 1871 aa15.57■□□□□ 0.08
PPFIA2-221ENST00000550798 SNRPA1P09661 255 aaKnown RBP15.57■□□□□ 0.08
PPFIA2-221ENST00000550798 PDE6BP35913 854 aa15.57■□□□□ 0.08
PPFIA2-221ENST00000550798 C16orf71Q8IYS4 520 aaPredicted RBP15.57■□□□□ 0.08
PPFIA2-221ENST00000550798 SETDB2Q96T68 719 aa15.57■□□□□ 0.08
PPFIA2-221ENST00000550798 TNRC6CQ9HCJ0 1690 aaKnown RBP15.57■□□□□ 0.08
PPFIA2-221ENST00000550798 NPHP1O15259 732 aa15.56■□□□□ 0.08
PPFIA2-221ENST00000550798 DZIP3Q86Y13 1208 aaKnown RBP15.56■□□□□ 0.08
PPFIA2-221ENST00000550798 BRIP1Q9BX63 1249 aa15.56■□□□□ 0.08
PPFIA2-221ENST00000550798 USP16Q9Y5T5 823 aa15.56■□□□□ 0.08
PPFIA2-221ENST00000550798 ZC3H4Q9UPT8 1303 aaKnown RBP15.56■□□□□ 0.08
PPFIA2-221ENST00000550798 DLG5Q8TDM6 1919 aa15.56■□□□□ 0.08
PPFIA2-221ENST00000550798 CAMTA2O94983 1202 aa15.55■□□□□ 0.08
PPFIA2-221ENST00000550798 APLP1P51693 650 aa15.55■□□□□ 0.08
PPFIA2-221ENST00000550798 RASSF7Q02833 373 aa15.55■□□□□ 0.08
PPFIA2-221ENST00000550798 PRR5LQ6MZQ0 368 aa15.55■□□□□ 0.08
PPFIA2-221ENST00000550798 LMNB1P20700 586 aa15.54■□□□□ 0.08
PPFIA2-221ENST00000550798 ST5P78524 1137 aa15.54■□□□□ 0.08
PPFIA2-221ENST00000550798 DCTN1Q14203 1278 aa15.54■□□□□ 0.08
PPFIA2-221ENST00000550798 CNBD1Q8NA66 436 aa15.54■□□□□ 0.08
PPFIA2-221ENST00000550798 RBM46Q8TBY0 533 aaKnown RBP15.54■□□□□ 0.08
PPFIA2-221ENST00000550798 ZNF622Q969S3 477 aaKnown RBP eCLIP15.54■□□□□ 0.08
PPFIA2-221ENST00000550798 COL11A2P13942 1736 aaPredicted RBP15.54■□□□□ 0.08
PPFIA2-221ENST00000550798 PRAMEF22A3QJZ6 481 aa15.53■□□□□ 0.08
PPFIA2-221ENST00000550798 TAF7Q15545 349 aaPredicted RBP15.53■□□□□ 0.08
PPFIA2-221ENST00000550798 CLEC4GQ6UXB4 293 aa15.53■□□□□ 0.08
PPFIA2-221ENST00000550798 ZNF652Q9Y2D9 606 aa15.53■□□□□ 0.08
PPFIA2-221ENST00000550798 TIAM2Q8IVF5 1701 aa15.53■□□□□ 0.08
PPFIA2-221ENST00000550798 CACNA1SQ13698 1873 aa15.52■□□□□ 0.08
PPFIA2-221ENST00000550798 LAMB4A4D0S4 1761 aa15.52■□□□□ 0.08
PPFIA2-221ENST00000550798 PIP4K2AP48426 406 aaPredicted RBP15.52■□□□□ 0.08
PPFIA2-221ENST00000550798 CCDC24Q8N4L8 307 aa15.52■□□□□ 0.08
PPFIA2-221ENST00000550798 PNNQ9H307 717 aaKnown RBP15.52■□□□□ 0.08
PPFIA2-221ENST00000550798 RRAGCQ9HB90 399 aa15.52■□□□□ 0.08
PPFIA2-221ENST00000550798 DICER1Q9UPY3 1922 aaKnown RBP15.51■□□□□ 0.07
PPFIA2-221ENST00000550798 FER1L6Q2WGJ9 1857 aa15.51■□□□□ 0.07
PPFIA2-221ENST00000550798 FSTL1Q12841 308 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms