RNA–Protein interactions for RNA: ENST00000550716.1

ATP2B1-207, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2B1, Length 486 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-207ENST00000550716 PCDHGA10Q9Y5H3 936 aa12.32□□□□□ -0.44
ATP2B1-207ENST00000550716 ST20-MTHFSA0A0A6YYL1 179 aa12.31□□□□□ -0.44
ATP2B1-207ENST00000550716 PHF14O94880 888 aa12.31□□□□□ -0.44
ATP2B1-207ENST00000550716 PSEN2P49810 448 aa12.31□□□□□ -0.44
ATP2B1-207ENST00000550716 IP6K1Q92551 441 aa12.31□□□□□ -0.44
ATP2B1-207ENST00000550716 ADAM33Q9BZ11 813 aa12.31□□□□□ -0.44
ATP2B1-207ENST00000550716 FHDC1Q9C0D6 1143 aaPredicted RBP12.31□□□□□ -0.44
ATP2B1-207ENST00000550716 TERF2IPQ9NYB0 399 aa12.31□□□□□ -0.44
ATP2B1-207ENST00000550716 MAP3K19Q56UN5 1328 aa12.31□□□□□ -0.44
ATP2B1-207ENST00000550716 BTAF1O14981 1849 aa12.3□□□□□ -0.44
ATP2B1-207ENST00000550716 ANKRD13DQ6ZTN6 518 aa12.3□□□□□ -0.44
ATP2B1-207ENST00000550716 BCL2L12Q9HB09 334 aa12.3□□□□□ -0.44
ATP2B1-207ENST00000550716 FAM208AQ9UK61 1670 aaKnown RBP12.29□□□□□ -0.44
ATP2B1-207ENST00000550716 MEGF6O75095 1541 aa12.29□□□□□ -0.44
ATP2B1-207ENST00000550716 KCNQ4P56696 695 aa12.29□□□□□ -0.44
ATP2B1-207ENST00000550716 SPNS2Q8IVW8 549 aa12.29□□□□□ -0.44
ATP2B1-207ENST00000550716 DDX54Q8TDD1 881 aaKnown RBP12.29□□□□□ -0.44
ATP2B1-207ENST00000550716 ARHGEF1Q92888 912 aaKnown RBP12.29□□□□□ -0.44
ATP2B1-207ENST00000550716 SYT17Q9BSW7 474 aa12.29□□□□□ -0.44
ATP2B1-207ENST00000550716 MTFR1LQ9H019 292 aa12.29□□□□□ -0.44
ATP2B1-207ENST00000550716 NSD2O96028 1365 aa12.29□□□□□ -0.44
ATP2B1-207ENST00000550716 HOXC9P31274 260 aa12.28□□□□□ -0.44
ATP2B1-207ENST00000550716 TYW1BQ6NUM6 668 aa12.28□□□□□ -0.44
ATP2B1-207ENST00000550716 PUS7Q96PZ0 661 aaKnown RBP12.28□□□□□ -0.44
ATP2B1-207ENST00000550716 GOLGB1Q14789 3259 aaKnown RBP12.27□□□□□ -0.45
ATP2B1-207ENST00000550716 NBR1Q14596 966 aa12.27□□□□□ -0.45
ATP2B1-207ENST00000550716 DMRTA1Q5VZB9 504 aa12.27□□□□□ -0.45
ATP2B1-207ENST00000550716 SHANK3Q9BYB0 1731 aa12.26□□□□□ -0.45
ATP2B1-207ENST00000550716 PTPREP23469 700 aa12.26□□□□□ -0.45
ATP2B1-207ENST00000550716 RRS1Q15050 365 aaKnown RBP12.26□□□□□ -0.45
ATP2B1-207ENST00000550716 USHBP1Q8N6Y0 703 aa12.26□□□□□ -0.45
ATP2B1-207ENST00000550716 FBXW7Q969H0 707 aa12.26□□□□□ -0.45
ATP2B1-207ENST00000550716 COG3Q96JB2 828 aa12.26□□□□□ -0.45
ATP2B1-207ENST00000550716 EPAS1Q99814 870 aa12.26□□□□□ -0.45
ATP2B1-207ENST00000550716 ANKRD36BQ8N2N9 1353 aa12.26□□□□□ -0.45
ATP2B1-207ENST00000550716 PRIM1P49642 420 aaKnown RBP12.25□□□□□ -0.45
ATP2B1-207ENST00000550716 ARXQ96QS3 562 aa12.25□□□□□ -0.45
ATP2B1-207ENST00000550716 GGNBP2Q9H3C7 697 aa12.25□□□□□ -0.45
ATP2B1-207ENST00000550716 PNPLA7Q6ZV29 1317 aa12.25□□□□□ -0.45
ATP2B1-207ENST00000550716 DOT1LQ8TEK3 1739 aa12.25□□□□□ -0.45
ATP2B1-207ENST00000550716 GRXCR2A6NFK2 248 aa12.24□□□□□ -0.45
ATP2B1-207ENST00000550716 RGPD2P0DJD1 1756 aa12.24□□□□□ -0.45
ATP2B1-207ENST00000550716 AMPHP49418 695 aa12.24□□□□□ -0.45
ATP2B1-207ENST00000550716 NBPF6Q5VWK0 638 aa12.24□□□□□ -0.45
ATP2B1-207ENST00000550716 VSIG10Q8N0Z9 540 aa12.24□□□□□ -0.45
ATP2B1-207ENST00000550716 SYTL4Q96C24 671 aaPredicted RBP12.24□□□□□ -0.45
ATP2B1-207ENST00000550716 NBPF4Q96M43 638 aa12.24□□□□□ -0.45
ATP2B1-207ENST00000550716 RTL1A6NKG5 1358 aa12.23□□□□□ -0.45
ATP2B1-207ENST00000550716 USP47Q96K76 1375 aa12.23□□□□□ -0.45
ATP2B1-207ENST00000550716 FYB1O15117 783 aa12.23□□□□□ -0.45
ATP2B1-207ENST00000550716 MAP3K5Q99683 1374 aa12.22□□□□□ -0.45
ATP2B1-207ENST00000550716 ZNF784Q8NCA9 323 aaPredicted RBP12.22□□□□□ -0.45
ATP2B1-207ENST00000550716 ZCRB1Q8TBF4 217 aaKnown RBP12.22□□□□□ -0.45
ATP2B1-207ENST00000550716 TUBGCP6Q96RT7 1819 aa12.22□□□□□ -0.45
ATP2B1-207ENST00000550716 SLC27A3Q5K4L6 730 aa12.21□□□□□ -0.45
ATP2B1-207ENST00000550716 ADGRD1Q6QNK2 874 aa12.21□□□□□ -0.45
ATP2B1-207ENST00000550716 MMRN1Q13201 1228 aa12.2□□□□□ -0.46
ATP2B1-207ENST00000550716 HSP90AB2PQ58FF8 381 aa12.2□□□□□ -0.46
ATP2B1-207ENST00000550716 NLGN2Q8NFZ4 835 aa12.2□□□□□ -0.46
ATP2B1-207ENST00000550716 LY75O60449 1722 aa12.2□□□□□ -0.46
ATP2B1-207ENST00000550716 MAP3K7O43318 606 aa12.19□□□□□ -0.46
ATP2B1-207ENST00000550716 CARD14Q9BXL6 1004 aa12.19□□□□□ -0.46
ATP2B1-207ENST00000550716 TFCP2L1Q9NZI6 479 aa12.19□□□□□ -0.46
ATP2B1-207ENST00000550716 CCNL1Q9UK58 526 aaPredicted RBP12.19□□□□□ -0.46
ATP2B1-207ENST00000550716 COL24A1Q17RW2 1714 aa12.18□□□□□ -0.46
ATP2B1-207ENST00000550716 QSER1Q2KHR3 1735 aa12.18□□□□□ -0.46
ATP2B1-207ENST00000550716 TMF1P82094 1093 aa12.18□□□□□ -0.46
ATP2B1-207ENST00000550716 EMILIN1Q9Y6C2 1016 aa12.18□□□□□ -0.46
ATP2B1-207ENST00000550716 INSRP06213 1382 aa12.18□□□□□ -0.46
ATP2B1-207ENST00000550716 PPP1R3GB7ZBB8 358 aa12.17□□□□□ -0.46
ATP2B1-207ENST00000550716 TK2O00142 265 aa12.17□□□□□ -0.46
ATP2B1-207ENST00000550716 COL23A1Q86Y22 540 aaPredicted RBP12.17□□□□□ -0.46
ATP2B1-207ENST00000550716 SLC16A10Q8TF71 515 aa12.17□□□□□ -0.46
ATP2B1-207ENST00000550716 KAT6BQ8WYB5 2073 aa12.17□□□□□ -0.46
ATP2B1-207ENST00000550716 FLT4P35916 1363 aa12.17□□□□□ -0.46
ATP2B1-207ENST00000550716 CYP27B1O15528 508 aa12.16□□□□□ -0.46
ATP2B1-207ENST00000550716 COL9A1P20849 921 aa12.16□□□□□ -0.46
ATP2B1-207ENST00000550716 MLLT3P42568 568 aaPredicted RBP12.16□□□□□ -0.46
ATP2B1-207ENST00000550716 MSL1Q68DK7 614 aa12.16□□□□□ -0.46
ATP2B1-207ENST00000550716 AMIGO3Q86WK7 504 aa12.16□□□□□ -0.46
ATP2B1-207ENST00000550716 RAPGEF4Q8WZA2 1011 aa12.16□□□□□ -0.46
ATP2B1-207ENST00000550716 SMG6Q86US8 1419 aaKnown RBP12.16□□□□□ -0.46
ATP2B1-207ENST00000550716 NSD3Q9BZ95 1437 aa12.16□□□□□ -0.46
ATP2B1-207ENST00000550716 TOGARAM1Q9Y4F4 1720 aa12.16□□□□□ -0.46
ATP2B1-207ENST00000550716 TATP17735 454 aaPredicted RBP12.15□□□□□ -0.46
ATP2B1-207ENST00000550716 POLD1P28340 1107 aa12.15□□□□□ -0.46
ATP2B1-207ENST00000550716 GPR162Q16538 588 aa12.15□□□□□ -0.46
ATP2B1-207ENST00000550716 TSR1Q2NL82 804 aaKnown RBP12.15□□□□□ -0.46
ATP2B1-207ENST00000550716 C6orf132Q5T0Z8 1188 aa12.15□□□□□ -0.46
ATP2B1-207ENST00000550716 SMIM5Q71RC9 77 aa12.15□□□□□ -0.46
ATP2B1-207ENST00000550716 ZBED2Q9BTP6 218 aa12.15□□□□□ -0.46
ATP2B1-207ENST00000550716 KIF20BQ96Q89 1820 aa12.15□□□□□ -0.46
ATP2B1-207ENST00000550716 NCAPD2Q15021 1401 aa12.14□□□□□ -0.47
ATP2B1-207ENST00000550716 PALLDQ8WX93 1383 aa12.14□□□□□ -0.47
ATP2B1-207ENST00000550716 CGNL1Q0VF96 1302 aa12.13□□□□□ -0.47
ATP2B1-207ENST00000550716 PCDH11XQ9BZA7 1347 aa12.13□□□□□ -0.47
ATP2B1-207ENST00000550716 PCDH11YQ9BZA8 1340 aa12.13□□□□□ -0.47
ATP2B1-207ENST00000550716 SEMA3EO15041 775 aa12.13□□□□□ -0.47
ATP2B1-207ENST00000550716 SLC24A1O60721 1099 aa12.13□□□□□ -0.47
ATP2B1-207ENST00000550716 YBX3P16989 372 aaKnown RBP eCLIP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms