RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 MTUS2Q5JR59 1369 aa8.88□□□□□ -0.99
SCAF11-213ENST00000550629 SENP3-EIF4A1A0A087X0R7 540 aa8.88□□□□□ -0.99
SCAF11-213ENST00000550629 ARID3CA6NKF2 412 aa8.88□□□□□ -0.99
SCAF11-213ENST00000550629 TRAK2O60296 914 aa8.88□□□□□ -0.99
SCAF11-213ENST00000550629 SLURP2P0DP57 97 aa8.88□□□□□ -0.99
SCAF11-213ENST00000550629 SOX11P35716 441 aa8.88□□□□□ -0.99
SCAF11-213ENST00000550629 FOXD4L5Q5VV16 416 aaPredicted RBP8.88□□□□□ -0.99
SCAF11-213ENST00000550629 WWC1Q8IX03 1113 aa8.88□□□□□ -0.99
SCAF11-213ENST00000550629 ABCC10Q5T3U5 1492 aa8.88□□□□□ -0.99
SCAF11-213ENST00000550629 GLI2P10070 1586 aa8.87□□□□□ -0.99
SCAF11-213ENST00000550629 MAGI3Q5TCQ9 1506 aa8.87□□□□□ -0.99
SCAF11-213ENST00000550629 LYSMD3Q7Z3D4 306 aa8.87□□□□□ -0.99
SCAF11-213ENST00000550629 CYP2U1Q7Z449 544 aa8.87□□□□□ -0.99
SCAF11-213ENST00000550629 WHAMMQ8TF30 809 aa8.87□□□□□ -0.99
SCAF11-213ENST00000550629 CLUAP1Q96AJ1 413 aa8.87□□□□□ -0.99
SCAF11-213ENST00000550629 ESF1Q9H501 851 aaKnown RBP8.87□□□□□ -0.99
SCAF11-213ENST00000550629 CHIC2Q9UKJ5 165 aa8.87□□□□□ -0.99
SCAF11-213ENST00000550629 DOLKQ9UPQ8 538 aa8.87□□□□□ -0.99
SCAF11-213ENST00000550629 KIF14Q15058 1648 aa8.87□□□□□ -0.99
SCAF11-213ENST00000550629 A0A1W2PRU2 124 aa8.86□□□□□ -0.99
SCAF11-213ENST00000550629 MARSP56192 900 aaKnown RBP8.86□□□□□ -0.99
SCAF11-213ENST00000550629 MAP3K10Q02779 954 aa8.86□□□□□ -0.99
SCAF11-213ENST00000550629 ALG2Q9H553 416 aa8.86□□□□□ -0.99
SCAF11-213ENST00000550629 POM121CA8CG34 1229 aa8.85□□□□□ -0.99
SCAF11-213ENST00000550629 MEN1O00255 615 aa8.85□□□□□ -0.99
SCAF11-213ENST00000550629 MYCP01106 439 aaPredicted RBP8.85□□□□□ -0.99
SCAF11-213ENST00000550629 DIP2BQ9P265 1576 aa8.85□□□□□ -0.99
SCAF11-213ENST00000550629 ABCA9Q8IUA7 1624 aa8.84□□□□□ -0.99
SCAF11-213ENST00000550629 PIK3CDO00329 1044 aa8.84□□□□□ -0.99
SCAF11-213ENST00000550629 ADAMTS2O95450 1211 aa8.84□□□□□ -0.99
SCAF11-213ENST00000550629 IRS1P35568 1242 aa8.84□□□□□ -0.99
SCAF11-213ENST00000550629 RNF144AP50876 292 aaPredicted RBP8.84□□□□□ -0.99
SCAF11-213ENST00000550629 OXLD1Q5BKU9 147 aa8.84□□□□□ -0.99
SCAF11-213ENST00000550629 SUPT6HQ7KZ85 1726 aaKnown RBP8.84□□□□□ -0.99
SCAF11-213ENST00000550629 PSMG3-AS1Q96PY0 264 aa8.84□□□□□ -0.99
SCAF11-213ENST00000550629 ARHGEF10LQ9HCE6 1279 aa8.84□□□□□ -0.99
SCAF11-213ENST00000550629 USP4Q13107 963 aa8.83□□□□□ -1
SCAF11-213ENST00000550629 KANK4Q5T7N3 995 aaPredicted RBP8.83□□□□□ -1
SCAF11-213ENST00000550629 PRICKLE2Q7Z3G6 844 aa8.83□□□□□ -1
SCAF11-213ENST00000550629 PLPP7Q8NBV4 271 aa8.83□□□□□ -1
SCAF11-213ENST00000550629 RAB6BQ9NRW1 208 aa8.83□□□□□ -1
SCAF11-213ENST00000550629 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.83□□□□□ -1
SCAF11-213ENST00000550629 ARAP3Q8WWN8 1544 aa8.83□□□□□ -1
SCAF11-213ENST00000550629 NCOA2Q15596 1464 aa8.83□□□□□ -1
SCAF11-213ENST00000550629 ARHGEF15O94989 841 aa8.82□□□□□ -1
SCAF11-213ENST00000550629 GNRH1P01148 92 aa8.82□□□□□ -1
SCAF11-213ENST00000550629 RHOQP17081 205 aa8.82□□□□□ -1
SCAF11-213ENST00000550629 SRSF11Q05519 484 aaKnown RBP8.82□□□□□ -1
SCAF11-213ENST00000550629 CLN3Q13286 438 aa8.82□□□□□ -1
SCAF11-213ENST00000550629 MAP7D1Q3KQU3 841 aa8.82□□□□□ -1
SCAF11-213ENST00000550629 KRTAP1-3Q8IUG1 177 aa8.82□□□□□ -1
SCAF11-213ENST00000550629 ADAMTS19Q8TE59 1207 aa8.82□□□□□ -1
SCAF11-213ENST00000550629 SCARF2Q96GP6 870 aaPredicted RBP8.82□□□□□ -1
SCAF11-213ENST00000550629 NLRP3Q96P20 1036 aa8.82□□□□□ -1
SCAF11-213ENST00000550629 MAP3K4Q9Y6R4 1608 aa8.81□□□□□ -1
SCAF11-213ENST00000550629 GPC1P35052 558 aa8.81□□□□□ -1
SCAF11-213ENST00000550629 FAM69CQ0P6D2 419 aa8.81□□□□□ -1
SCAF11-213ENST00000550629 FNBP4Q8N3X1 1017 aaPredicted RBP8.81□□□□□ -1
SCAF11-213ENST00000550629 CUEDC1Q9NWM3 386 aaPredicted RBP8.81□□□□□ -1
SCAF11-213ENST00000550629 DNMT3AQ9Y6K1 912 aaPredicted RBP8.81□□□□□ -1
SCAF11-213ENST00000550629 CCNB3Q8WWL7 1395 aa8.81□□□□□ -1
SCAF11-213ENST00000550629 TTC37Q6PGP7 1564 aa8.81□□□□□ -1
SCAF11-213ENST00000550629 PLCH2O75038 1416 aa8.8□□□□□ -1
SCAF11-213ENST00000550629 CD109Q6YHK3 1445 aa8.8□□□□□ -1
SCAF11-213ENST00000550629 KANK3Q6NY19 840 aa8.8□□□□□ -1
SCAF11-213ENST00000550629 FOXR1Q6PIV2 292 aa8.8□□□□□ -1
SCAF11-213ENST00000550629 RIPOR1Q6ZS17 1223 aa8.8□□□□□ -1
SCAF11-213ENST00000550629 PROSER2Q86WR7 435 aaPredicted RBP8.8□□□□□ -1
SCAF11-213ENST00000550629 GPATCH8Q9UKJ3 1502 aaKnown RBP8.8□□□□□ -1
SCAF11-213ENST00000550629 TEX14Q8IWB6 1497 aa8.79□□□□□ -1
SCAF11-213ENST00000550629 PHLDB1Q86UU1 1377 aa8.79□□□□□ -1
SCAF11-213ENST00000550629 STAU1O95793 577 aaKnown RBP8.79□□□□□ -1
SCAF11-213ENST00000550629 IL2RAP01589 272 aa8.79□□□□□ -1
SCAF11-213ENST00000550629 SKIP12755 728 aa8.79□□□□□ -1
SCAF11-213ENST00000550629 GAS6Q14393 721 aa8.79□□□□□ -1
SCAF11-213ENST00000550629 HDGFL1Q5TGJ6 251 aa8.79□□□□□ -1
SCAF11-213ENST00000550629 CNKSR1Q969H4 720 aa8.79□□□□□ -1
SCAF11-213ENST00000550629 SIRT1Q96EB6 747 aa8.79□□□□□ -1
SCAF11-213ENST00000550629 ZNF837Q96EG3 531 aaPredicted RBP8.79□□□□□ -1
SCAF11-213ENST00000550629 KIF13AQ9H1H9 1805 aa8.79□□□□□ -1
SCAF11-213ENST00000550629 PREX2Q70Z35 1606 aa8.79□□□□□ -1
SCAF11-213ENST00000550629 MYOM3Q5VTT5 1437 aa8.79□□□□□ -1
SCAF11-213ENST00000550629 MIA2Q96PC5 1412 aa8.79□□□□□ -1
SCAF11-213ENST00000550629 ITSN2Q9NZM3 1697 aa8.78□□□□□ -1
SCAF11-213ENST00000550629 MYO5CQ9NQX4 1742 aa8.78□□□□□ -1
SCAF11-213ENST00000550629 IGHA1P01876 353 aa8.78□□□□□ -1
SCAF11-213ENST00000550629 SLC27A3Q5K4L6 730 aa8.78□□□□□ -1
SCAF11-213ENST00000550629 LYPD4Q6UWN0 246 aa8.78□□□□□ -1
SCAF11-213ENST00000550629 TRIM22Q8IYM9 498 aa8.78□□□□□ -1
SCAF11-213ENST00000550629 ESYT1Q9BSJ8 1104 aa8.78□□□□□ -1
SCAF11-213ENST00000550629 GRIP2Q9C0E4 1043 aa8.78□□□□□ -1
SCAF11-213ENST00000550629 ENAMQ9NRM1 1142 aa8.78□□□□□ -1
SCAF11-213ENST00000550629 CFAP74Q9C0B2 1584 aa8.78□□□□□ -1
SCAF11-213ENST00000550629 NEO1Q92859 1461 aa8.77□□□□□ -1
SCAF11-213ENST00000550629 EFCAB2Q5VUJ9 269 aa8.77□□□□□ -1.01
SCAF11-213ENST00000550629 XAGE2Q96GT9 111 aa8.77□□□□□ -1.01
SCAF11-213ENST00000550629 GMCL1Q96IK5 515 aa8.77□□□□□ -1.01
SCAF11-213ENST00000550629 MBIPQ9NS73 344 aa8.77□□□□□ -1.01
SCAF11-213ENST00000550629 HRH3Q9Y5N1 445 aa8.77□□□□□ -1.01
SCAF11-213ENST00000550629 FANCAO15360 1455 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms