RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 MAP7D1Q3KQU3 841 aa6.38□□□□□ -1.39
CCNT1-203ENST00000550457 SLC4A9Q96Q91 983 aa6.38□□□□□ -1.39
CCNT1-203ENST00000550457 NIFKQ9BYG3 293 aaKnown RBP6.38□□□□□ -1.39
CCNT1-203ENST00000550457 KLF15Q9UIH9 416 aa6.38□□□□□ -1.39
CCNT1-203ENST00000550457 FIGNL1Q6PIW4 674 aa6.37□□□□□ -1.39
CCNT1-203ENST00000550457 NLRP8Q86W28 1048 aa6.37□□□□□ -1.39
CCNT1-203ENST00000550457 C1orf216Q8TAB5 229 aa6.37□□□□□ -1.39
CCNT1-203ENST00000550457 AIDAQ96BJ3 306 aa6.37□□□□□ -1.39
CCNT1-203ENST00000550457 BTBD6Q96KE9 485 aa6.37□□□□□ -1.39
CCNT1-203ENST00000550457 PCDHGA11Q9Y5H2 935 aa6.37□□□□□ -1.39
CCNT1-203ENST00000550457 A0A1W2PNR3 127 aa6.36□□□□□ -1.39
CCNT1-203ENST00000550457 A6NJY4 79 aa6.36□□□□□ -1.39
CCNT1-203ENST00000550457 NEURL1BA8MQ27 555 aa6.36□□□□□ -1.39
CCNT1-203ENST00000550457 ATXN7O15265 892 aaPredicted RBP6.36□□□□□ -1.39
CCNT1-203ENST00000550457 ARAFP10398 606 aa6.36□□□□□ -1.39
CCNT1-203ENST00000550457 AMPD1P23109 780 aa6.36□□□□□ -1.39
CCNT1-203ENST00000550457 TNP2Q05952 138 aa6.36□□□□□ -1.39
CCNT1-203ENST00000550457 SEMA3FQ13275 785 aa6.36□□□□□ -1.39
CCNT1-203ENST00000550457 MTFR1Q15390 333 aa6.36□□□□□ -1.39
CCNT1-203ENST00000550457 WASHC4Q2M389 1173 aa6.36□□□□□ -1.39
CCNT1-203ENST00000550457 DCDC2BA2VCK2 349 aa6.35□□□□□ -1.39
CCNT1-203ENST00000550457 CDK2AP1O14519 115 aa6.35□□□□□ -1.39
CCNT1-203ENST00000550457 MAPTP10636 758 aaKnown RBP6.35□□□□□ -1.39
CCNT1-203ENST00000550457 CD33P20138 364 aa6.35□□□□□ -1.39
CCNT1-203ENST00000550457 DGKGP49619 791 aa6.35□□□□□ -1.39
CCNT1-203ENST00000550457 GRIN2CQ14957 1233 aa6.35□□□□□ -1.39
CCNT1-203ENST00000550457 ZIC5Q96T25 663 aa6.35□□□□□ -1.39
CCNT1-203ENST00000550457 SOX11P35716 441 aa6.34□□□□□ -1.39
CCNT1-203ENST00000550457 BAG6P46379 1132 aa6.34□□□□□ -1.39
CCNT1-203ENST00000550457 ARSJQ5FYB0 599 aaPredicted RBP6.34□□□□□ -1.39
CCNT1-203ENST00000550457 FCHSD1Q86WN1 690 aa6.34□□□□□ -1.39
CCNT1-203ENST00000550457 PARP3Q9Y6F1 533 aa6.34□□□□□ -1.39
CCNT1-203ENST00000550457 KHNYNO15037 678 aaKnown RBP6.33□□□□□ -1.4
CCNT1-203ENST00000550457 NBPF1Q3BBV0 1214 aa6.33□□□□□ -1.4
CCNT1-203ENST00000550457 FAM182BQ5T319 152 aa6.33□□□□□ -1.4
CCNT1-203ENST00000550457 ALYREFQ86V81 257 aaKnown RBP6.33□□□□□ -1.4
CCNT1-203ENST00000550457 ZDHHC1Q8WTX9 485 aa6.33□□□□□ -1.4
CCNT1-203ENST00000550457 STRN4Q9NRL3 753 aa6.33□□□□□ -1.4
CCNT1-203ENST00000550457 ZDHHC3Q9NYG2 299 aa6.33□□□□□ -1.4
CCNT1-203ENST00000550457 COG6Q9Y2V7 657 aa6.33□□□□□ -1.4
CCNT1-203ENST00000550457 K7ELQ4 463 aaPredicted RBP6.32□□□□□ -1.4
CCNT1-203ENST00000550457 GNB5O14775 395 aa6.32□□□□□ -1.4
CCNT1-203ENST00000550457 FAM157BP0CG42 384 aa6.32□□□□□ -1.4
CCNT1-203ENST00000550457 TXLNAP40222 546 aa6.32□□□□□ -1.4
CCNT1-203ENST00000550457 CHSY3Q70JA7 882 aa6.32□□□□□ -1.4
CCNT1-203ENST00000550457 ALG2Q9H553 416 aa6.32□□□□□ -1.4
CCNT1-203ENST00000550457 CABP1Q9NZU7 370 aa6.32□□□□□ -1.4
CCNT1-203ENST00000550457 C1QTNF9BB2RNN3 333 aa6.31□□□□□ -1.4
CCNT1-203ENST00000550457 EFSO43281 561 aa6.31□□□□□ -1.4
CCNT1-203ENST00000550457 FURINP09958 794 aa6.31□□□□□ -1.4
CCNT1-203ENST00000550457 SKIP12755 728 aa6.31□□□□□ -1.4
CCNT1-203ENST00000550457 TATP17735 454 aaPredicted RBP6.31□□□□□ -1.4
CCNT1-203ENST00000550457 ADH6P28332 368 aa6.31□□□□□ -1.4
CCNT1-203ENST00000550457 PCBP4P57723 403 aaKnown RBP6.31□□□□□ -1.4
CCNT1-203ENST00000550457 GTF2IP78347 998 aa6.31□□□□□ -1.4
CCNT1-203ENST00000550457 CD163Q86VB7 1156 aa6.31□□□□□ -1.4
CCNT1-203ENST00000550457 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.31□□□□□ -1.4
CCNT1-203ENST00000550457 ZNF358Q9NW07 568 aa6.31□□□□□ -1.4
CCNT1-203ENST00000550457 SCHIP1Q9P0W5 487 aaPredicted RBP6.31□□□□□ -1.4
CCNT1-203ENST00000550457 CHRNA4P43681 627 aa6.3□□□□□ -1.4
CCNT1-203ENST00000550457 EPHA4P54764 986 aa6.3□□□□□ -1.4
CCNT1-203ENST00000550457 NCOA4Q13772 614 aa6.3□□□□□ -1.4
CCNT1-203ENST00000550457 EML3Q32P44 896 aa6.3□□□□□ -1.4
CCNT1-203ENST00000550457 SAMD5Q5TGI4 173 aa6.3□□□□□ -1.4
CCNT1-203ENST00000550457 POM121Q96HA1 1249 aa6.3□□□□□ -1.4
CCNT1-203ENST00000550457 AVENQ9NQS1 362 aaPredicted RBP6.3□□□□□ -1.4
CCNT1-203ENST00000550457 TBCELQ5QJ74 424 aa6.29□□□□□ -1.4
CCNT1-203ENST00000550457 ZNF468Q5VIY5 522 aaPredicted RBP6.29□□□□□ -1.4
CCNT1-203ENST00000550457 DEPDC4Q8N2C3 294 aa6.29□□□□□ -1.4
CCNT1-203ENST00000550457 C7orf43Q8WVR3 580 aa6.29□□□□□ -1.4
CCNT1-203ENST00000550457 TRIM11Q96F44 468 aa6.29□□□□□ -1.4
CCNT1-203ENST00000550457 KRTAP4-8Q9BYQ9 185 aa6.29□□□□□ -1.4
CCNT1-203ENST00000550457 NOD1Q9Y239 953 aa6.29□□□□□ -1.4
CCNT1-203ENST00000550457 BACH1O14867 736 aa6.28□□□□□ -1.4
CCNT1-203ENST00000550457 BICDL1Q6ZP65 573 aa6.28□□□□□ -1.4
CCNT1-203ENST00000550457 NFATC2IPQ8NCF5 419 aa6.28□□□□□ -1.4
CCNT1-203ENST00000550457 L3MBTL2Q969R5 705 aa6.28□□□□□ -1.4
CCNT1-203ENST00000550457 MDFIQ99750 246 aa6.28□□□□□ -1.4
CCNT1-203ENST00000550457 MARK1Q9P0L2 795 aa6.28□□□□□ -1.4
CCNT1-203ENST00000550457 GJA3Q9Y6H8 435 aa6.28□□□□□ -1.4
CCNT1-203ENST00000550457 USP17L5A8MUK1 530 aa6.27□□□□□ -1.41
CCNT1-203ENST00000550457 EML1O00423 815 aa6.27□□□□□ -1.41
CCNT1-203ENST00000550457 PIK3R2O00459 728 aa6.27□□□□□ -1.41
CCNT1-203ENST00000550457 PSME1Q06323 249 aa6.27□□□□□ -1.41
CCNT1-203ENST00000550457 TEAD4Q15561 434 aa6.27□□□□□ -1.41
CCNT1-203ENST00000550457 SH3PXD2AQ5TCZ1 1133 aa6.27□□□□□ -1.41
CCNT1-203ENST00000550457 LRRC69Q6ZNQ3 347 aa6.27□□□□□ -1.41
CCNT1-203ENST00000550457 SLC9A9Q8IVB4 645 aa6.27□□□□□ -1.41
CCNT1-203ENST00000550457 TNS4Q8IZW8 715 aa6.27□□□□□ -1.41
CCNT1-203ENST00000550457 ADAMTS19Q8TE59 1207 aa6.27□□□□□ -1.41
CCNT1-203ENST00000550457 PRR12Q9ULL5 1215 aa6.27□□□□□ -1.41
CCNT1-203ENST00000550457 LZTS3O60299 673 aaPredicted RBP6.26□□□□□ -1.41
CCNT1-203ENST00000550457 NOS2P35228 1153 aa6.26□□□□□ -1.41
CCNT1-203ENST00000550457 LAMC2Q13753 1193 aa6.26□□□□□ -1.41
CCNT1-203ENST00000550457 NOP53Q9NZM5 478 aaKnown RBP6.26□□□□□ -1.41
CCNT1-203ENST00000550457 KIAA1024Q9UPX6 916 aa6.26□□□□□ -1.41
CCNT1-203ENST00000550457 POM121CA8CG34 1229 aa6.25□□□□□ -1.41
CCNT1-203ENST00000550457 ZBTB7BO15156 539 aaPredicted RBP6.25□□□□□ -1.41
CCNT1-203ENST00000550457 ITGB7P26010 798 aa6.25□□□□□ -1.41
CCNT1-203ENST00000550457 SYT9Q86SS6 491 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms