RNA–Protein interactions for RNA: ENST00000550436.4

SVOP-203, Transcript of SV2 related protein, humanhuman

TSL 4

Gene SVOP, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-203ENST00000550436 CYP19A1P11511 503 aaPredicted RBP20.55■□□□□ 0.88
SVOP-203ENST00000550436 NFIXQ14938 502 aa20.55■□□□□ 0.88
SVOP-203ENST00000550436 SLC52A2Q9HAB3 445 aa20.55■□□□□ 0.88
SVOP-203ENST00000550436 BCL2L12Q9HB09 334 aa20.55■□□□□ 0.88
SVOP-203ENST00000550436 CCDC88AQ3V6T2 1871 aa20.54■□□□□ 0.88
SVOP-203ENST00000550436 ZPR1O75312 459 aa20.54■□□□□ 0.88
SVOP-203ENST00000550436 HMOX1P09601 288 aa20.54■□□□□ 0.88
SVOP-203ENST00000550436 KLRG1Q96E93 195 aa20.54■□□□□ 0.88
SVOP-203ENST00000550436 KDM2BQ8NHM5 1336 aa20.53■□□□□ 0.88
SVOP-203ENST00000550436 RNMTO43148 476 aaKnown RBP20.53■□□□□ 0.88
SVOP-203ENST00000550436 AKAP4Q5JQC9 854 aa20.53■□□□□ 0.88
SVOP-203ENST00000550436 ZBTB1Q9Y2K1 713 aa20.53■□□□□ 0.88
SVOP-203ENST00000550436 COL13A1Q5TAT6 717 aaPredicted RBP20.52■□□□□ 0.88
SVOP-203ENST00000550436 CARMIL3Q8ND23 1372 aa20.51■□□□□ 0.87
SVOP-203ENST00000550436 FSTL1Q12841 308 aa20.51■□□□□ 0.87
SVOP-203ENST00000550436 NARFQ9UHQ1 456 aa20.51■□□□□ 0.87
SVOP-203ENST00000550436 TNRC6CQ9HCJ0 1690 aaKnown RBP20.51■□□□□ 0.87
SVOP-203ENST00000550436 NRXN2Q9P2S2 1712 aa20.5■□□□□ 0.87
SVOP-203ENST00000550436 COL15A1P39059 1388 aa20.49■□□□□ 0.87
SVOP-203ENST00000550436 SERPINB2P05120 415 aa20.49■□□□□ 0.87
SVOP-203ENST00000550436 MTHFSDQ2M296 383 aaKnown RBP20.49■□□□□ 0.87
SVOP-203ENST00000550436 JMYQ8N9B5 988 aa20.49■□□□□ 0.87
SVOP-203ENST00000550436 KNSTRNQ9Y448 316 aa20.49■□□□□ 0.87
SVOP-203ENST00000550436 MRC1P22897 1456 aa20.49■□□□□ 0.87
SVOP-203ENST00000550436 CANXP27824 592 aaKnown RBP20.48■□□□□ 0.87
SVOP-203ENST00000550436 AMER1Q5JTC6 1135 aaPredicted RBP20.48■□□□□ 0.87
SVOP-203ENST00000550436 BICDL1Q6ZP65 573 aa20.48■□□□□ 0.87
SVOP-203ENST00000550436 DLEC1Q9Y238 1755 aa20.48■□□□□ 0.87
SVOP-203ENST00000550436 C2CD5Q86YS7 1000 aa20.47■□□□□ 0.87
SVOP-203ENST00000550436 CCDC24Q8N4L8 307 aa20.47■□□□□ 0.87
SVOP-203ENST00000550436 NFKBIEO00221 500 aa20.45■□□□□ 0.86
SVOP-203ENST00000550436 LMNB1P20700 586 aa20.45■□□□□ 0.86
SVOP-203ENST00000550436 SMC1BQ8NDV3 1235 aa20.45■□□□□ 0.86
SVOP-203ENST00000550436 ANKRD31Q8N7Z5 1873 aa20.45■□□□□ 0.86
SVOP-203ENST00000550436 CAPN15O75808 1086 aa20.44■□□□□ 0.86
SVOP-203ENST00000550436 TTLL6Q8N841 843 aa20.44■□□□□ 0.86
SVOP-203ENST00000550436 ZNF219Q9P2Y4 722 aaPredicted RBP20.44■□□□□ 0.86
SVOP-203ENST00000550436 TIAM2Q8IVF5 1701 aa20.44■□□□□ 0.86
SVOP-203ENST00000550436 UBR2Q8IWV8 1755 aa20.44■□□□□ 0.86
SVOP-203ENST00000550436 GLTPD2A6NH11 291 aa20.43■□□□□ 0.86
SVOP-203ENST00000550436 POTECB2RU33 542 aa20.43■□□□□ 0.86
SVOP-203ENST00000550436 TBC1D9BQ66K14 1250 aa20.42■□□□□ 0.86
SVOP-203ENST00000550436 VEGFAP15692 232 aaPredicted RBP20.41■□□□□ 0.86
SVOP-203ENST00000550436 EIF5P55010 431 aaKnown RBP20.41■□□□□ 0.86
SVOP-203ENST00000550436 H0YIN7 160 aa20.4■□□□□ 0.86
SVOP-203ENST00000550436 COL11A2P13942 1736 aaPredicted RBP20.4■□□□□ 0.86
SVOP-203ENST00000550436 ZNF496Q96IT1 587 aaPredicted RBP20.4■□□□□ 0.86
SVOP-203ENST00000550436 TBC1D2BQ9UPU7 963 aa20.4■□□□□ 0.86
SVOP-203ENST00000550436 ZC3H4Q9UPT8 1303 aaKnown RBP20.39■□□□□ 0.85
SVOP-203ENST00000550436 CNGB1Q14028 1251 aaPredicted RBP20.39■□□□□ 0.85
SVOP-203ENST00000550436 CC2D1BQ5T0F9 858 aaKnown RBP20.39■□□□□ 0.85
SVOP-203ENST00000550436 VSIG10Q8N0Z9 540 aa20.39■□□□□ 0.85
SVOP-203ENST00000550436 IL17REQ8NFR9 667 aa20.39■□□□□ 0.85
SVOP-203ENST00000550436 ZNF622Q969S3 477 aaKnown RBP eCLIP20.39■□□□□ 0.85
SVOP-203ENST00000550436 ZNF330Q9Y3S2 320 aaPredicted RBP20.39■□□□□ 0.85
SVOP-203ENST00000550436 PCNTO95613 3336 aa20.38■□□□□ 0.85
SVOP-203ENST00000550436 KIF7Q2M1P5 1343 aa20.38■□□□□ 0.85
SVOP-203ENST00000550436 C21orf2O43822 256 aa20.38■□□□□ 0.85
SVOP-203ENST00000550436 DIAPH1O60610 1272 aaKnown RBP20.38■□□□□ 0.85
SVOP-203ENST00000550436 PRR5LQ6MZQ0 368 aa20.37■□□□□ 0.85
SVOP-203ENST00000550436 CACNA1SQ13698 1873 aa20.37■□□□□ 0.85
SVOP-203ENST00000550436 FER1L6Q2WGJ9 1857 aa20.37■□□□□ 0.85
SVOP-203ENST00000550436 DICER1Q9UPY3 1922 aaKnown RBP20.36■□□□□ 0.85
SVOP-203ENST00000550436 PER1O15534 1290 aaPredicted RBP20.36■□□□□ 0.85
SVOP-203ENST00000550436 TNS4Q8IZW8 715 aa20.36■□□□□ 0.85
SVOP-203ENST00000550436 TTC5Q8N0Z6 440 aa20.36■□□□□ 0.85
SVOP-203ENST00000550436 SLX4Q8IY92 1834 aa20.35■□□□□ 0.85
SVOP-203ENST00000550436 KCNQ3O43525 872 aa20.35■□□□□ 0.85
SVOP-203ENST00000550436 STARD3NLO95772 234 aa20.35■□□□□ 0.85
SVOP-203ENST00000550436 A1BGP04217 495 aa20.35■□□□□ 0.85
SVOP-203ENST00000550436 HSPA1AP0DMV8 641 aaKnown RBP20.35■□□□□ 0.85
SVOP-203ENST00000550436 HSPA1BP0DMV9 641 aaKnown RBP20.35■□□□□ 0.85
SVOP-203ENST00000550436 SCN7AQ01118 1682 aa20.35■□□□□ 0.85
SVOP-203ENST00000550436 HEG1Q9ULI3 1381 aa20.34■□□□□ 0.85
SVOP-203ENST00000550436 SIPA1L3O60292 1781 aaPredicted RBP20.34■□□□□ 0.85
SVOP-203ENST00000550436 POTEIP0CG38 1075 aa20.34■□□□□ 0.85
SVOP-203ENST00000550436 POTEJP0CG39 1038 aa20.34■□□□□ 0.85
SVOP-203ENST00000550436 COL3A1P02461 1466 aaPredicted RBP20.33■□□□□ 0.85
SVOP-203ENST00000550436 A0A087WZG4 1122 aa20.33■□□□□ 0.85
SVOP-203ENST00000550436 PIP4K2AP48426 406 aaPredicted RBP20.33■□□□□ 0.85
SVOP-203ENST00000550436 ZNF790Q6PG37 636 aa20.33■□□□□ 0.85
SVOP-203ENST00000550436 BRIP1Q9BX63 1249 aa20.33■□□□□ 0.85
SVOP-203ENST00000550436 U2SURPO15042 1029 aaKnown RBP20.32■□□□□ 0.84
SVOP-203ENST00000550436 ERFEQ4G0M1 354 aa20.32■□□□□ 0.84
SVOP-203ENST00000550436 CAMTA2O94983 1202 aa20.31■□□□□ 0.84
SVOP-203ENST00000550436 TEFQ10587 303 aa20.31■□□□□ 0.84
SVOP-203ENST00000550436 GNAT3A8MTJ3 354 aa20.3■□□□□ 0.84
SVOP-203ENST00000550436 DDNO94850 711 aaPredicted RBP20.3■□□□□ 0.84
SVOP-203ENST00000550436 PDE6BP35913 854 aa20.3■□□□□ 0.84
SVOP-203ENST00000550436 DPY19L2Q6NUT2 758 aa20.3■□□□□ 0.84
SVOP-203ENST00000550436 PRAMEF22A3QJZ6 481 aa20.29■□□□□ 0.84
SVOP-203ENST00000550436 IL6STP40189 918 aaPredicted RBP20.29■□□□□ 0.84
SVOP-203ENST00000550436 PHACTR3Q96KR7 559 aa20.29■□□□□ 0.84
SVOP-203ENST00000550436 MKRN1Q9UHC7 482 aaKnown RBP20.28■□□□□ 0.84
SVOP-203ENST00000550436 PRPF40BQ6NWY9 871 aaKnown RBP20.27■□□□□ 0.84
SVOP-203ENST00000550436 CNBD1Q8NA66 436 aa20.27■□□□□ 0.84
SVOP-203ENST00000550436 SETDB2Q96T68 719 aa20.27■□□□□ 0.84
SVOP-203ENST00000550436 TAOK3Q9H2K8 898 aa20.27■□□□□ 0.84
SVOP-203ENST00000550436 USP16Q9Y5T5 823 aa20.27■□□□□ 0.84
SVOP-203ENST00000550436 SRGNP10124 158 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms