RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 ALDH1L2Q3SY69 923 aa18.14■□□□□ 0.49
CACNB3-216ENST00000550391 ZNF496Q96IT1 587 aaPredicted RBP18.14■□□□□ 0.49
CACNB3-216ENST00000550391 FMNL2Q96PY5 1086 aa18.14■□□□□ 0.49
CACNB3-216ENST00000550391 SGIP1Q9BQI5 828 aa18.14■□□□□ 0.49
CACNB3-216ENST00000550391 ATG3Q9NT62 314 aa18.14■□□□□ 0.49
CACNB3-216ENST00000550391 C5P01031 1676 aa18.13■□□□□ 0.49
CACNB3-216ENST00000550391 STK32BQ9NY57 414 aa18.13■□□□□ 0.49
CACNB3-216ENST00000550391 ASAP1Q9ULH1 1129 aa18.13■□□□□ 0.49
CACNB3-216ENST00000550391 BCAR3O75815 825 aa18.12■□□□□ 0.49
CACNB3-216ENST00000550391 SSH1Q8WYL5 1049 aa18.12■□□□□ 0.49
CACNB3-216ENST00000550391 CHMP4AQ9BY43 222 aa18.12■□□□□ 0.49
CACNB3-216ENST00000550391 LAMB4A4D0S4 1761 aa18.11■□□□□ 0.49
CACNB3-216ENST00000550391 BTAF1O14981 1849 aa18.1■□□□□ 0.49
CACNB3-216ENST00000550391 PRAMEF22A3QJZ6 481 aa18.1■□□□□ 0.49
CACNB3-216ENST00000550391 SNRPA1P09661 255 aaKnown RBP18.1■□□□□ 0.49
CACNB3-216ENST00000550391 BRPF1P55201 1214 aaPredicted RBP18.1■□□□□ 0.49
CACNB3-216ENST00000550391 SLC15A2Q16348 729 aa18.1■□□□□ 0.49
CACNB3-216ENST00000550391 BCL2L13Q9BXK5 485 aa18.1■□□□□ 0.49
CACNB3-216ENST00000550391 SMC4Q9NTJ3 1288 aa18.1■□□□□ 0.49
CACNB3-216ENST00000550391 GOLGB1Q14789 3259 aaKnown RBP18.1■□□□□ 0.49
CACNB3-216ENST00000550391 RRP1P56182 461 aaKnown RBP18.09■□□□□ 0.49
CACNB3-216ENST00000550391 CCDC30Q5VVM6 783 aa18.09■□□□□ 0.49
CACNB3-216ENST00000550391 MRPL50Q8N5N7 158 aaKnown RBP18.09■□□□□ 0.49
CACNB3-216ENST00000550391 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.09■□□□□ 0.49
CACNB3-216ENST00000550391 PTCD1O75127 700 aaKnown RBP18.08■□□□□ 0.48
CACNB3-216ENST00000550391 HDGFL1Q5TGJ6 251 aa18.08■□□□□ 0.48
CACNB3-216ENST00000550391 PTF1AQ7RTS3 328 aa18.08■□□□□ 0.48
CACNB3-216ENST00000550391 VSIG10Q8N0Z9 540 aa18.08■□□□□ 0.48
CACNB3-216ENST00000550391 TCERG1O14776 1098 aaKnown RBP18.07■□□□□ 0.48
CACNB3-216ENST00000550391 PROM2Q8N271 834 aa18.07■□□□□ 0.48
CACNB3-216ENST00000550391 SMARCC1Q92922 1105 aaPredicted RBP18.07■□□□□ 0.48
CACNB3-216ENST00000550391 CICQ96RK0 1608 aaPredicted RBP18.07■□□□□ 0.48
CACNB3-216ENST00000550391 PALLDQ8WX93 1383 aa18.06■□□□□ 0.48
CACNB3-216ENST00000550391 EIF2S2P20042 333 aaKnown RBP18.06■□□□□ 0.48
CACNB3-216ENST00000550391 USP16Q9Y5T5 823 aa18.06■□□□□ 0.48
CACNB3-216ENST00000550391 TJP1Q07157 1748 aa18.06■□□□□ 0.48
CACNB3-216ENST00000550391 CACNA1FO60840 1977 aa18.06■□□□□ 0.48
CACNB3-216ENST00000550391 ZNF831Q5JPB2 1677 aa18.06■□□□□ 0.48
CACNB3-216ENST00000550391 GRIN3BO60391 1043 aa18.05■□□□□ 0.48
CACNB3-216ENST00000550391 NEFLP07196 543 aa18.05■□□□□ 0.48
CACNB3-216ENST00000550391 NECTIN2Q92692 538 aa18.05■□□□□ 0.48
CACNB3-216ENST00000550391 SLC4A9Q96Q91 983 aa18.05■□□□□ 0.48
CACNB3-216ENST00000550391 RBM42Q9BTD8 480 aaKnown RBP18.05■□□□□ 0.48
CACNB3-216ENST00000550391 STK31Q9BXU1 1019 aa18.05■□□□□ 0.48
CACNB3-216ENST00000550391 KIF16BQ96L93 1317 aa18.04■□□□□ 0.48
CACNB3-216ENST00000550391 PLIN1O60240 522 aa18.04■□□□□ 0.48
CACNB3-216ENST00000550391 GPBP1L1Q9HC44 474 aaPredicted RBP18.04■□□□□ 0.48
CACNB3-216ENST00000550391 LY75O60449 1722 aa18.03■□□□□ 0.48
CACNB3-216ENST00000550391 IPO8O15397 1037 aaKnown RBP18.03■□□□□ 0.48
CACNB3-216ENST00000550391 SLC4A2P04920 1241 aa18.03■□□□□ 0.48
CACNB3-216ENST00000550391 CANXP27824 592 aaKnown RBP18.03■□□□□ 0.48
CACNB3-216ENST00000550391 FRAT1Q92837 279 aaPredicted RBP18.03■□□□□ 0.48
CACNB3-216ENST00000550391 TEX13AQ9BXU3 409 aaPredicted RBP18.03■□□□□ 0.48
CACNB3-216ENST00000550391 NOB1Q9ULX3 412 aaKnown RBP18.03■□□□□ 0.48
CACNB3-216ENST00000550391 LOC102724428A0A0B4J2F2 783 aa18.02■□□□□ 0.48
CACNB3-216ENST00000550391 SIK1P57059 783 aa18.02■□□□□ 0.48
CACNB3-216ENST00000550391 TXNRD1Q16881 649 aa18.02■□□□□ 0.48
CACNB3-216ENST00000550391 PELP1Q8IZL8 1130 aaKnown RBP18.02■□□□□ 0.48
CACNB3-216ENST00000550391 CHPF2Q9P2E5 772 aa18.02■□□□□ 0.48
CACNB3-216ENST00000550391 DBF4Q9UBU7 674 aaPredicted RBP18.02■□□□□ 0.48
CACNB3-216ENST00000550391 PDIA6Q15084 440 aa18.01■□□□□ 0.47
CACNB3-216ENST00000550391 ZKSCAN2Q63HK3 967 aa18.01■□□□□ 0.47
CACNB3-216ENST00000550391 DNAJC10Q8IXB1 793 aa18.01■□□□□ 0.47
CACNB3-216ENST00000550391 ARHGAP45Q92619 1136 aa18.01■□□□□ 0.47
CACNB3-216ENST00000550391 ERBB4Q15303 1308 aa18■□□□□ 0.47
CACNB3-216ENST00000550391 G2E3Q7L622 706 aa18■□□□□ 0.47
CACNB3-216ENST00000550391 DDX21Q9NR30 783 aaKnown RBP eCLIP18■□□□□ 0.47
CACNB3-216ENST00000550391 ATP10DQ9P241 1426 aa17.99■□□□□ 0.47
CACNB3-216ENST00000550391 COL5A3P25940 1745 aaPredicted RBP17.99■□□□□ 0.47
CACNB3-216ENST00000550391 MS4A1P11836 297 aa17.99■□□□□ 0.47
CACNB3-216ENST00000550391 ATP6V1AP38606 617 aa17.99■□□□□ 0.47
CACNB3-216ENST00000550391 PRELPP51888 382 aa17.99■□□□□ 0.47
CACNB3-216ENST00000550391 ATF7IPQ6VMQ6 1270 aa17.99■□□□□ 0.47
CACNB3-216ENST00000550391 PTPRCP08575 1304 aa17.98■□□□□ 0.47
CACNB3-216ENST00000550391 STARD3NLO95772 234 aa17.98■□□□□ 0.47
CACNB3-216ENST00000550391 CYP19A1P11511 503 aaPredicted RBP17.98■□□□□ 0.47
CACNB3-216ENST00000550391 TRIM27P14373 513 aa17.98■□□□□ 0.47
CACNB3-216ENST00000550391 APLP1P51693 650 aa17.98■□□□□ 0.47
CACNB3-216ENST00000550391 PDE3AQ14432 1141 aa17.98■□□□□ 0.47
CACNB3-216ENST00000550391 PROSER3Q2NL68 480 aa17.98■□□□□ 0.47
CACNB3-216ENST00000550391 PHAXQ9H814 394 aaKnown RBP17.98■□□□□ 0.47
CACNB3-216ENST00000550391 HYPKQ9NX55 129 aa17.98■□□□□ 0.47
CACNB3-216ENST00000550391 SLC34A2O95436 690 aa17.97■□□□□ 0.47
CACNB3-216ENST00000550391 ANXA1P04083 346 aa17.97■□□□□ 0.47
CACNB3-216ENST00000550391 A1BGP04217 495 aa17.97■□□□□ 0.47
CACNB3-216ENST00000550391 FLIIQ13045 1269 aa17.97■□□□□ 0.47
CACNB3-216ENST00000550391 ITPK1Q13572 414 aa17.97■□□□□ 0.47
CACNB3-216ENST00000550391 C20orf194Q5TEA3 1177 aa17.97■□□□□ 0.47
CACNB3-216ENST00000550391 LRP10Q7Z4F1 713 aa17.97■□□□□ 0.47
CACNB3-216ENST00000550391 API5Q9BZZ5 524 aaKnown RBP17.97■□□□□ 0.47
CACNB3-216ENST00000550391 TNNQ9UQP3 1299 aa17.97■□□□□ 0.47
CACNB3-216ENST00000550391 NBPF26B4DH59 902 aa17.96■□□□□ 0.47
CACNB3-216ENST00000550391 CAPN15O75808 1086 aa17.96■□□□□ 0.47
CACNB3-216ENST00000550391 POLD1P28340 1107 aa17.96■□□□□ 0.47
CACNB3-216ENST00000550391 IRX6P78412 446 aaPredicted RBP17.96■□□□□ 0.47
CACNB3-216ENST00000550391 FKBP8Q14318 412 aa17.96■□□□□ 0.47
CACNB3-216ENST00000550391 NBPF10Q6P3W6 841 aaKnown RBP17.96■□□□□ 0.47
CACNB3-216ENST00000550391 NBPF15Q8N660 670 aa17.96■□□□□ 0.47
CACNB3-216ENST00000550391 MYL6BP14649 208 aa17.95■□□□□ 0.46
CACNB3-216ENST00000550391 PIP4K2AP48426 406 aaPredicted RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms