RNA–Protein interactions for RNA: ENST00000550385.1

CHPT1-206, Transcript of choline phosphotransferase 1, humanhuman

TSL 5

Gene CHPT1, Length 754 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-206ENST00000550385 EIF2S2P20042 333 aaKnown RBP13.58□□□□□ -0.24
CHPT1-206ENST00000550385 HMGB2P26583 209 aaKnown RBP13.58□□□□□ -0.24
CHPT1-206ENST00000550385 CANXP27824 592 aaKnown RBP13.58□□□□□ -0.24
CHPT1-206ENST00000550385 KCNQ2O43526 872 aa13.57□□□□□ -0.24
CHPT1-206ENST00000550385 MRPL50Q8N5N7 158 aaKnown RBP13.57□□□□□ -0.24
CHPT1-206ENST00000550385 ARHGAP45Q92619 1136 aa13.57□□□□□ -0.24
CHPT1-206ENST00000550385 BCL11BQ9C0K0 894 aaPredicted RBP13.57□□□□□ -0.24
CHPT1-206ENST00000550385 DBF4Q9UBU7 674 aaPredicted RBP13.57□□□□□ -0.24
CHPT1-206ENST00000550385 ITGB4P16144 1822 aa13.57□□□□□ -0.24
CHPT1-206ENST00000550385 TOGARAM1Q9Y4F4 1720 aa13.56□□□□□ -0.24
CHPT1-206ENST00000550385 STARD3NLO95772 234 aa13.56□□□□□ -0.24
CHPT1-206ENST00000550385 ZKSCAN2Q63HK3 967 aa13.56□□□□□ -0.24
CHPT1-206ENST00000550385 FRAT1Q92837 279 aaPredicted RBP13.56□□□□□ -0.24
CHPT1-206ENST00000550385 BCL2L13Q9BXK5 485 aa13.56□□□□□ -0.24
CHPT1-206ENST00000550385 PDE3AQ14432 1141 aa13.55□□□□□ -0.24
CHPT1-206ENST00000550385 FAM182BQ5T319 152 aa13.55□□□□□ -0.24
CHPT1-206ENST00000550385 PTPRCP08575 1304 aa13.55□□□□□ -0.24
CHPT1-206ENST00000550385 ERBB4Q15303 1308 aa13.55□□□□□ -0.24
CHPT1-206ENST00000550385 DOT1LQ8TEK3 1739 aa13.55□□□□□ -0.24
CHPT1-206ENST00000550385 API5Q9BZZ5 524 aaKnown RBP13.54□□□□□ -0.24
CHPT1-206ENST00000550385 DDX21Q9NR30 783 aaKnown RBP eCLIP13.54□□□□□ -0.24
CHPT1-206ENST00000550385 HYPKQ9NX55 129 aa13.54□□□□□ -0.24
CHPT1-206ENST00000550385 NOB1Q9ULX3 412 aaKnown RBP13.54□□□□□ -0.24
CHPT1-206ENST00000550385 USP16Q9Y5T5 823 aa13.54□□□□□ -0.24
CHPT1-206ENST00000550385 LOC102724428A0A0B4J2F2 783 aa13.53□□□□□ -0.24
CHPT1-206ENST00000550385 TCERG1O14776 1098 aaKnown RBP13.53□□□□□ -0.24
CHPT1-206ENST00000550385 SIK1P57059 783 aa13.53□□□□□ -0.24
CHPT1-206ENST00000550385 ERICH6BQ5W0A0 696 aa13.53□□□□□ -0.24
CHPT1-206ENST00000550385 ATF7IPQ6VMQ6 1270 aa13.53□□□□□ -0.24
CHPT1-206ENST00000550385 NECTIN2Q92692 538 aa13.53□□□□□ -0.24
CHPT1-206ENST00000550385 PRAMEF22A3QJZ6 481 aa13.52□□□□□ -0.25
CHPT1-206ENST00000550385 PLIN1O60240 522 aa13.52□□□□□ -0.25
CHPT1-206ENST00000550385 ATP6V1AP38606 617 aa13.52□□□□□ -0.25
CHPT1-206ENST00000550385 PALLDQ8WX93 1383 aa13.52□□□□□ -0.25
CHPT1-206ENST00000550385 RGS12O14924 1447 aa13.52□□□□□ -0.25
CHPT1-206ENST00000550385 KCPQ6ZWJ8 1503 aa13.52□□□□□ -0.25
CHPT1-206ENST00000550385 PAPPAQ13219 1627 aa13.52□□□□□ -0.25
CHPT1-206ENST00000550385 CACNA1FO60840 1977 aa13.51□□□□□ -0.25
CHPT1-206ENST00000550385 BRWD3Q6RI45 1802 aa13.51□□□□□ -0.25
CHPT1-206ENST00000550385 UBR2Q8IWV8 1755 aa13.51□□□□□ -0.25
CHPT1-206ENST00000550385 TRIM37O94972 964 aa13.51□□□□□ -0.25
CHPT1-206ENST00000550385 DDX58O95786 925 aaKnown RBP13.51□□□□□ -0.25
CHPT1-206ENST00000550385 DNAJC10Q8IXB1 793 aa13.51□□□□□ -0.25
CHPT1-206ENST00000550385 FTSJ3Q8IY81 847 aaKnown RBP13.51□□□□□ -0.25
CHPT1-206ENST00000550385 DZIP1LQ8IYY4 767 aaKnown RBP13.51□□□□□ -0.25
CHPT1-206ENST00000550385 CHPF2Q9P2E5 772 aa13.51□□□□□ -0.25
CHPT1-206ENST00000550385 NHSQ6T4R5 1651 aa13.5□□□□□ -0.25
CHPT1-206ENST00000550385 FLIIQ13045 1269 aa13.5□□□□□ -0.25
CHPT1-206ENST00000550385 CHMP4BQ9H444 224 aaKnown RBP13.5□□□□□ -0.25
CHPT1-206ENST00000550385 CYP19A1P11511 503 aaPredicted RBP13.49□□□□□ -0.25
CHPT1-206ENST00000550385 TRIM27P14373 513 aa13.49□□□□□ -0.25
CHPT1-206ENST00000550385 FKBP5Q13451 457 aaPredicted RBP13.49□□□□□ -0.25
CHPT1-206ENST00000550385 PDIA6Q15084 440 aa13.49□□□□□ -0.25
CHPT1-206ENST00000550385 NPM2Q86SE8 214 aaKnown RBP13.49□□□□□ -0.25
CHPT1-206ENST00000550385 PLSCR1O15162 318 aa13.48□□□□□ -0.25
CHPT1-206ENST00000550385 A1BGP04217 495 aa13.48□□□□□ -0.25
CHPT1-206ENST00000550385 AAMPQ13685 434 aa13.48□□□□□ -0.25
CHPT1-206ENST00000550385 FKBP8Q14318 412 aa13.48□□□□□ -0.25
CHPT1-206ENST00000550385 SLC27A3Q5K4L6 730 aa13.48□□□□□ -0.25
CHPT1-206ENST00000550385 PTF1AQ7RTS3 328 aa13.48□□□□□ -0.25
CHPT1-206ENST00000550385 SLC4A9Q96Q91 983 aa13.48□□□□□ -0.25
CHPT1-206ENST00000550385 SBF2Q86WG5 1849 aa13.48□□□□□ -0.25
CHPT1-206ENST00000550385 MYL6BP14649 208 aa13.47□□□□□ -0.25
CHPT1-206ENST00000550385 G2E3Q7L622 706 aa13.47□□□□□ -0.25
CHPT1-206ENST00000550385 CLUAP1Q96AJ1 413 aa13.47□□□□□ -0.25
CHPT1-206ENST00000550385 PHAXQ9H814 394 aaKnown RBP13.47□□□□□ -0.25
CHPT1-206ENST00000550385 CCNL1Q9UK58 526 aaPredicted RBP13.47□□□□□ -0.25
CHPT1-206ENST00000550385 APBA3O96018 575 aa13.46□□□□□ -0.25
CHPT1-206ENST00000550385 IL6STP40189 918 aaPredicted RBP13.46□□□□□ -0.25
CHPT1-206ENST00000550385 RC3H1Q5TC82 1133 aaKnown RBP13.46□□□□□ -0.25
CHPT1-206ENST00000550385 KSR2Q6VAB6 950 aa13.46□□□□□ -0.25
CHPT1-206ENST00000550385 COPS6Q7L5N1 327 aa13.46□□□□□ -0.25
CHPT1-206ENST00000550385 CCDC87Q9NVE4 849 aa13.46□□□□□ -0.25
CHPT1-206ENST00000550385 ZNF831Q5JPB2 1677 aa13.45□□□□□ -0.26
CHPT1-206ENST00000550385 NBPF26B4DH59 902 aa13.45□□□□□ -0.26
CHPT1-206ENST00000550385 ANXA1P04083 346 aa13.45□□□□□ -0.26
CHPT1-206ENST00000550385 CCT4P50991 539 aaKnown RBP13.45□□□□□ -0.26
CHPT1-206ENST00000550385 IRX6P78412 446 aaPredicted RBP13.45□□□□□ -0.26
CHPT1-206ENST00000550385 SF3B2Q13435 895 aaKnown RBP13.45□□□□□ -0.26
CHPT1-206ENST00000550385 ITPK1Q13572 414 aa13.45□□□□□ -0.26
CHPT1-206ENST00000550385 PROSER3Q2NL68 480 aa13.45□□□□□ -0.26
CHPT1-206ENST00000550385 C20orf194Q5TEA3 1177 aa13.45□□□□□ -0.26
CHPT1-206ENST00000550385 NBPF14Q5TI25 921 aa13.45□□□□□ -0.26
CHPT1-206ENST00000550385 NBPF10Q6P3W6 841 aaKnown RBP13.45□□□□□ -0.26
CHPT1-206ENST00000550385 ANKRD13DQ6ZTN6 518 aa13.45□□□□□ -0.26
CHPT1-206ENST00000550385 NBPF15Q8N660 670 aa13.45□□□□□ -0.26
CHPT1-206ENST00000550385 PANK1Q8TE04 598 aa13.45□□□□□ -0.26
CHPT1-206ENST00000550385 XAGE3Q8WTP9 111 aa13.45□□□□□ -0.26
CHPT1-206ENST00000550385 DDX19BQ9UMR2 479 aa13.45□□□□□ -0.26
CHPT1-206ENST00000550385 SSUH2Q9Y2M2 353 aa13.45□□□□□ -0.26
CHPT1-206ENST00000550385 GTF3C3Q9Y5Q9 886 aa13.45□□□□□ -0.26
CHPT1-206ENST00000550385 BTAF1O14981 1849 aa13.45□□□□□ -0.26
CHPT1-206ENST00000550385 ABCC4O15439 1325 aa13.44□□□□□ -0.26
CHPT1-206ENST00000550385 CRKLP46109 303 aaKnown RBP13.44□□□□□ -0.26
CHPT1-206ENST00000550385 AIMP1Q12904 312 aaKnown RBP13.44□□□□□ -0.26
CHPT1-206ENST00000550385 MVPQ14764 893 aaKnown RBP13.44□□□□□ -0.26
CHPT1-206ENST00000550385 INTS3Q68E01 1043 aaKnown RBP13.44□□□□□ -0.26
CHPT1-206ENST00000550385 LRP10Q7Z4F1 713 aa13.44□□□□□ -0.26
CHPT1-206ENST00000550385 RIC3Q7Z5B4 369 aa13.44□□□□□ -0.26
CHPT1-206ENST00000550385 CCDC125Q86Z20 511 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms