RNA–Protein interactions for RNA: ENST00000550345.5

PFKM-219, Transcript of phosphofructokinase, muscle, humanhuman

TSL 4

Gene PFKM, Length 762 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-219ENST00000550345 CCDC88AQ3V6T2 1871 aa12.4□□□□□ -0.42
PFKM-219ENST00000550345 LOC102724428A0A0B4J2F2 783 aa12.4□□□□□ -0.42
PFKM-219ENST00000550345 FOXN1O15353 648 aa12.4□□□□□ -0.42
PFKM-219ENST00000550345 SIK1P57059 783 aa12.4□□□□□ -0.42
PFKM-219ENST00000550345 C1orf141Q5JVX7 400 aa12.4□□□□□ -0.42
PFKM-219ENST00000550345 CCDC87Q9NVE4 849 aa12.4□□□□□ -0.42
PFKM-219ENST00000550345 ZNF316A6NFI3 1004 aaPredicted RBP12.39□□□□□ -0.43
PFKM-219ENST00000550345 ERVV-2B6SEH9 535 aa12.39□□□□□ -0.43
PFKM-219ENST00000550345 U2AF1L5P0DN76 240 aaPredicted RBP12.39□□□□□ -0.43
PFKM-219ENST00000550345 PRKAR2BP31323 418 aa12.39□□□□□ -0.43
PFKM-219ENST00000550345 U2AF1Q01081 240 aaKnown RBP eCLIP12.39□□□□□ -0.43
PFKM-219ENST00000550345 RALBP1Q15311 655 aa12.39□□□□□ -0.43
PFKM-219ENST00000550345 ATG3Q9NT62 314 aa12.39□□□□□ -0.43
PFKM-219ENST00000550345 C4AP0C0L4 1744 aa12.39□□□□□ -0.43
PFKM-219ENST00000550345 HSP90AB1P08238 724 aaKnown RBP12.38□□□□□ -0.43
PFKM-219ENST00000550345 ITPK1Q13572 414 aa12.38□□□□□ -0.43
PFKM-219ENST00000550345 AKAP4Q5JQC9 854 aa12.38□□□□□ -0.43
PFKM-219ENST00000550345 PIM2Q9P1W9 311 aa12.38□□□□□ -0.43
PFKM-219ENST00000550345 MKRN1Q9UHC7 482 aaKnown RBP12.38□□□□□ -0.43
PFKM-219ENST00000550345 RNMTO43148 476 aaKnown RBP12.37□□□□□ -0.43
PFKM-219ENST00000550345 VEGFAP15692 232 aaPredicted RBP12.37□□□□□ -0.43
PFKM-219ENST00000550345 CABP4P57796 275 aa12.37□□□□□ -0.43
PFKM-219ENST00000550345 DALRD3Q5D0E6 543 aaKnown RBP12.37□□□□□ -0.43
PFKM-219ENST00000550345 NLGN1Q8N2Q7 840 aa12.37□□□□□ -0.43
PFKM-219ENST00000550345 NFATC2IPQ8NCF5 419 aa12.37□□□□□ -0.43
PFKM-219ENST00000550345 SLC4A9Q96Q91 983 aa12.37□□□□□ -0.43
PFKM-219ENST00000550345 PRDM10Q9NQV6 1147 aa12.37□□□□□ -0.43
PFKM-219ENST00000550345 NUDCQ9Y266 331 aa12.37□□□□□ -0.43
PFKM-219ENST00000550345 SCN11AQ9UI33 1791 aa12.37□□□□□ -0.43
PFKM-219ENST00000550345 ATP6V1AP38606 617 aa12.36□□□□□ -0.43
PFKM-219ENST00000550345 TRAPPC3LQ5T215 181 aa12.36□□□□□ -0.43
PFKM-219ENST00000550345 PRKRIP1Q9H875 184 aaPredicted RBP12.36□□□□□ -0.43
PFKM-219ENST00000550345 PARP3Q9Y6F1 533 aa12.36□□□□□ -0.43
PFKM-219ENST00000550345 MYBBP1AQ9BQG0 1328 aaKnown RBP12.36□□□□□ -0.43
PFKM-219ENST00000550345 GLTPD2A6NH11 291 aa12.35□□□□□ -0.43
PFKM-219ENST00000550345 RASSF7Q02833 373 aa12.35□□□□□ -0.43
PFKM-219ENST00000550345 IL17REQ8NFR9 667 aa12.35□□□□□ -0.43
PFKM-219ENST00000550345 ADAMTS7Q9UKP4 1686 aa12.35□□□□□ -0.43
PFKM-219ENST00000550345 GYS1P13807 737 aa12.34□□□□□ -0.43
PFKM-219ENST00000550345 ARHGEF1Q92888 912 aaKnown RBP12.34□□□□□ -0.43
PFKM-219ENST00000550345 SLC52A2Q9HAB3 445 aa12.34□□□□□ -0.43
PFKM-219ENST00000550345 RTCBQ9Y3I0 505 aaKnown RBP12.34□□□□□ -0.43
PFKM-219ENST00000550345 VIRMAQ69YN4 1812 aaKnown RBP12.34□□□□□ -0.43
PFKM-219ENST00000550345 CHRNA5P30532 468 aa12.33□□□□□ -0.44
PFKM-219ENST00000550345 CTCFP49711 727 aaPredicted RBP12.33□□□□□ -0.44
PFKM-219ENST00000550345 SLC39A6Q13433 755 aa12.33□□□□□ -0.44
PFKM-219ENST00000550345 GAS2L2Q8NHY3 880 aa12.33□□□□□ -0.44
PFKM-219ENST00000550345 ABHD8Q96I13 439 aa12.33□□□□□ -0.44
PFKM-219ENST00000550345 PLEKHF1Q96S99 279 aa12.33□□□□□ -0.44
PFKM-219ENST00000550345 RBM42Q9BTD8 480 aaKnown RBP12.33□□□□□ -0.44
PFKM-219ENST00000550345 CREBZFQ9NS37 354 aa12.33□□□□□ -0.44
PFKM-219ENST00000550345 MRC1P22897 1456 aa12.33□□□□□ -0.44
PFKM-219ENST00000550345 MYH14Q7Z406 1995 aaKnown RBP12.32□□□□□ -0.44
PFKM-219ENST00000550345 GNAT3A8MTJ3 354 aa12.32□□□□□ -0.44
PFKM-219ENST00000550345 POTECB2RU33 542 aa12.32□□□□□ -0.44
PFKM-219ENST00000550345 PTCD1O75127 700 aaKnown RBP12.32□□□□□ -0.44
PFKM-219ENST00000550345 ZC3H4Q9UPT8 1303 aaKnown RBP12.32□□□□□ -0.44
PFKM-219ENST00000550345 TIAM2Q8IVF5 1701 aa12.31□□□□□ -0.44
PFKM-219ENST00000550345 RFC4P35249 363 aa12.31□□□□□ -0.44
PFKM-219ENST00000550345 LBX1P52954 281 aa12.31□□□□□ -0.44
PFKM-219ENST00000550345 MLLT1Q03111 559 aaPredicted RBP12.31□□□□□ -0.44
PFKM-219ENST00000550345 DCTN1Q14203 1278 aa12.31□□□□□ -0.44
PFKM-219ENST00000550345 CCDC184Q52MB2 194 aa12.31□□□□□ -0.44
PFKM-219ENST00000550345 AIDAQ96BJ3 306 aa12.31□□□□□ -0.44
PFKM-219ENST00000550345 MCM10Q7L590 875 aa12.3□□□□□ -0.44
PFKM-219ENST00000550345 CNTNAP1P78357 1384 aa12.3□□□□□ -0.44
PFKM-219ENST00000550345 CEMIPQ8WUJ3 1361 aa12.3□□□□□ -0.44
PFKM-219ENST00000550345 KCNQ3O43525 872 aa12.29□□□□□ -0.44
PFKM-219ENST00000550345 LMNB1P20700 586 aa12.29□□□□□ -0.44
PFKM-219ENST00000550345 COL5A3P25940 1745 aaPredicted RBP12.28□□□□□ -0.44
PFKM-219ENST00000550345 SIPA1L3O60292 1781 aaPredicted RBP12.28□□□□□ -0.44
PFKM-219ENST00000550345 CCDC146Q8IYE0 955 aa12.28□□□□□ -0.44
PFKM-219ENST00000550345 PDE4DIPQ5VU43 2346 aa12.28□□□□□ -0.44
PFKM-219ENST00000550345 TJP1Q07157 1748 aa12.28□□□□□ -0.44
PFKM-219ENST00000550345 ZNF831Q5JPB2 1677 aa12.27□□□□□ -0.45
PFKM-219ENST00000550345 CCDC85CA6NKD9 419 aa12.27□□□□□ -0.45
PFKM-219ENST00000550345 TNRC18O15417 2968 aaPredicted RBP12.27□□□□□ -0.45
PFKM-219ENST00000550345 RPS6KA4O75676 772 aa12.27□□□□□ -0.45
PFKM-219ENST00000550345 VEGFBP49765 207 aa12.27□□□□□ -0.45
PFKM-219ENST00000550345 DDR1Q08345 913 aa12.27□□□□□ -0.45
PFKM-219ENST00000550345 TEFQ10587 303 aa12.27□□□□□ -0.45
PFKM-219ENST00000550345 RC3H1Q5TC82 1133 aaKnown RBP12.27□□□□□ -0.45
PFKM-219ENST00000550345 DNAJC10Q8IXB1 793 aa12.27□□□□□ -0.45
PFKM-219ENST00000550345 THUMPD2Q9BTF0 503 aaKnown RBP12.27□□□□□ -0.45
PFKM-219ENST00000550345 WBP1LQ9NX94 342 aa12.27□□□□□ -0.45
PFKM-219ENST00000550345 ADAMTS8Q9UP79 889 aa12.27□□□□□ -0.45
PFKM-219ENST00000550345 DICER1Q9UPY3 1922 aaKnown RBP12.27□□□□□ -0.45
PFKM-219ENST00000550345 POTEIP0CG38 1075 aa12.26□□□□□ -0.45
PFKM-219ENST00000550345 POTEJP0CG39 1038 aa12.26□□□□□ -0.45
PFKM-219ENST00000550345 RGS19P49795 217 aa12.26□□□□□ -0.45
PFKM-219ENST00000550345 FKBP8Q14318 412 aa12.26□□□□□ -0.45
PFKM-219ENST00000550345 NFE2L2Q16236 605 aa12.26□□□□□ -0.45
PFKM-219ENST00000550345 CHADLQ6NUI6 762 aa12.26□□□□□ -0.45
PFKM-219ENST00000550345 SRP68Q9UHB9 627 aaKnown RBP12.26□□□□□ -0.45
PFKM-219ENST00000550345 DLG5Q8TDM6 1919 aa12.26□□□□□ -0.45
PFKM-219ENST00000550345 AFDNP55196 1824 aaKnown RBP12.25□□□□□ -0.45
PFKM-219ENST00000550345 HSPA8P11142 646 aaKnown RBP12.25□□□□□ -0.45
PFKM-219ENST00000550345 ZNF790Q6PG37 636 aa12.25□□□□□ -0.45
PFKM-219ENST00000550345 ZNF496Q96IT1 587 aaPredicted RBP12.25□□□□□ -0.45
PFKM-219ENST00000550345 MIS18AQ9NYP9 233 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms