RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 CSB-PGBD3P0DP91 1061 aa10.94□□□□□ -0.66
TMEM116-209ENST00000550020 ANAPC15P60006 121 aa10.94□□□□□ -0.66
TMEM116-209ENST00000550020 NUCB2P80303 420 aa10.94□□□□□ -0.66
TMEM116-209ENST00000550020 MTX1Q13505 466 aa10.94□□□□□ -0.66
TMEM116-209ENST00000550020 IFNL2Q8IZJ0 200 aa10.94□□□□□ -0.66
TMEM116-209ENST00000550020 PI4KAP1Q8N8J0 262 aa10.94□□□□□ -0.66
TMEM116-209ENST00000550020 KIF2CQ99661 725 aa10.94□□□□□ -0.66
TMEM116-209ENST00000550020 PHAXQ9H814 394 aaKnown RBP10.94□□□□□ -0.66
TMEM116-209ENST00000550020 DDX21Q9NR30 783 aaKnown RBP eCLIP10.94□□□□□ -0.66
TMEM116-209ENST00000550020 NLRP2Q9NX02 1062 aa10.94□□□□□ -0.66
TMEM116-209ENST00000550020 SALL3Q9BXA9 1300 aa10.93□□□□□ -0.66
TMEM116-209ENST00000550020 ALS2Q96Q42 1657 aa10.93□□□□□ -0.66
TMEM116-209ENST00000550020 SRGAP3O43295 1099 aa10.93□□□□□ -0.66
TMEM116-209ENST00000550020 DDIT3P35638 169 aa10.93□□□□□ -0.66
TMEM116-209ENST00000550020 NEXNQ0ZGT2 675 aa10.93□□□□□ -0.66
TMEM116-209ENST00000550020 PPP1R42Q7Z4L9 355 aa10.93□□□□□ -0.66
TMEM116-209ENST00000550020 SPRYD3Q8NCJ5 442 aa10.93□□□□□ -0.66
TMEM116-209ENST00000550020 LINS1Q8NG48 757 aa10.93□□□□□ -0.66
TMEM116-209ENST00000550020 DCAF5Q96JK2 942 aa10.93□□□□□ -0.66
TMEM116-209ENST00000550020 C9orf78Q9NZ63 289 aaPredicted RBP10.93□□□□□ -0.66
TMEM116-209ENST00000550020 CPDO75976 1380 aa10.92□□□□□ -0.66
TMEM116-209ENST00000550020 TTC41PQ6P2S7 1318 aa10.92□□□□□ -0.66
TMEM116-209ENST00000550020 PNMA6EA0A0J9YXQ4 647 aa10.92□□□□□ -0.66
TMEM116-209ENST00000550020 TRIM6-TRIM34B2RNG4 842 aa10.92□□□□□ -0.66
TMEM116-209ENST00000550020 ZC3H6P61129 1189 aaKnown RBP10.92□□□□□ -0.66
TMEM116-209ENST00000550020 OS9Q13438 667 aaPredicted RBP10.92□□□□□ -0.66
TMEM116-209ENST00000550020 LARP1Q6PKG0 1096 aaKnown RBP10.92□□□□□ -0.66
TMEM116-209ENST00000550020 TTC5Q8N0Z6 440 aa10.92□□□□□ -0.66
TMEM116-209ENST00000550020 CNTROBQ8N137 903 aa10.92□□□□□ -0.66
TMEM116-209ENST00000550020 OTUD7AQ8TE49 926 aaPredicted RBP10.92□□□□□ -0.66
TMEM116-209ENST00000550020 ESYT1Q9BSJ8 1104 aa10.92□□□□□ -0.66
TMEM116-209ENST00000550020 SLC52A2Q9HAB3 445 aa10.92□□□□□ -0.66
TMEM116-209ENST00000550020 ADAMTS7Q9UKP4 1686 aa10.92□□□□□ -0.66
TMEM116-209ENST00000550020 RAB3GAP1Q15042 981 aa10.91□□□□□ -0.66
TMEM116-209ENST00000550020 CLASRPQ8N2M8 674 aaKnown RBP10.91□□□□□ -0.66
TMEM116-209ENST00000550020 RHPN1Q8TCX5 695 aa10.91□□□□□ -0.66
TMEM116-209ENST00000550020 RUFY2Q8WXA3 655 aa10.91□□□□□ -0.66
TMEM116-209ENST00000550020 BCL11AQ9H165 835 aa10.91□□□□□ -0.66
TMEM116-209ENST00000550020 MAP3K2Q9Y2U5 619 aa10.91□□□□□ -0.66
TMEM116-209ENST00000550020 PXDNQ92626 1479 aa10.91□□□□□ -0.66
TMEM116-209ENST00000550020 ADCY9O60503 1353 aa10.9□□□□□ -0.66
TMEM116-209ENST00000550020 SPATA31A3Q5VYP0 1347 aa10.9□□□□□ -0.66
TMEM116-209ENST00000550020 GLRX3O76003 335 aaKnown RBP10.9□□□□□ -0.66
TMEM116-209ENST00000550020 SNRPA1P09661 255 aaKnown RBP10.9□□□□□ -0.66
TMEM116-209ENST00000550020 PHKG2P15735 406 aa10.9□□□□□ -0.66
TMEM116-209ENST00000550020 ZNF790Q6PG37 636 aa10.9□□□□□ -0.66
TMEM116-209ENST00000550020 RILPL2Q969X0 211 aa10.9□□□□□ -0.66
TMEM116-209ENST00000550020 AXIN2Q9Y2T1 843 aa10.9□□□□□ -0.66
TMEM116-209ENST00000550020 UTYO14607 1347 aa10.89□□□□□ -0.67
TMEM116-209ENST00000550020 ERBB4Q15303 1308 aa10.89□□□□□ -0.67
TMEM116-209ENST00000550020 USP42Q9H9J4 1324 aaKnown RBP10.89□□□□□ -0.67
TMEM116-209ENST00000550020 HIP1O00291 1037 aa10.89□□□□□ -0.67
TMEM116-209ENST00000550020 KCNQ3O43525 872 aa10.89□□□□□ -0.67
TMEM116-209ENST00000550020 TRAK2O60296 914 aa10.89□□□□□ -0.67
TMEM116-209ENST00000550020 CHMLP26374 656 aa10.89□□□□□ -0.67
TMEM116-209ENST00000550020 CLEC17AQ6ZS10 378 aa10.89□□□□□ -0.67
TMEM116-209ENST00000550020 KIAA1211Q6ZU35 1233 aa10.89□□□□□ -0.67
TMEM116-209ENST00000550020 RIC3Q7Z5B4 369 aa10.89□□□□□ -0.67
TMEM116-209ENST00000550020 IL17RAQ96F46 866 aa10.89□□□□□ -0.67
TMEM116-209ENST00000550020 FMNL2Q96PY5 1086 aa10.89□□□□□ -0.67
TMEM116-209ENST00000550020 GRM8O00222 908 aa10.88□□□□□ -0.67
TMEM116-209ENST00000550020 NBPF7P0C2Y1 421 aaPredicted RBP10.88□□□□□ -0.67
TMEM116-209ENST00000550020 DNAJC5Q9H3Z4 198 aa10.88□□□□□ -0.67
TMEM116-209ENST00000550020 MRC1P22897 1456 aa10.87□□□□□ -0.67
TMEM116-209ENST00000550020 GOLGA6L3A6NEY3 463 aa10.87□□□□□ -0.67
TMEM116-209ENST00000550020 PLEKHG5O94827 1062 aa10.87□□□□□ -0.67
TMEM116-209ENST00000550020 IFIT2P09913 472 aaKnown RBP10.87□□□□□ -0.67
TMEM116-209ENST00000550020 CABP4P57796 275 aa10.87□□□□□ -0.67
TMEM116-209ENST00000550020 G3BP1Q13283 466 aaKnown RBP eCLIP10.87□□□□□ -0.67
TMEM116-209ENST00000550020 TNPO1Q92973 898 aaKnown RBP10.87□□□□□ -0.67
TMEM116-209ENST00000550020 ANO2Q9NQ90 1003 aa10.87□□□□□ -0.67
TMEM116-209ENST00000550020 ECHDC1Q9NTX5 307 aa10.87□□□□□ -0.67
TMEM116-209ENST00000550020 PCDH11XQ9BZA7 1347 aa10.86□□□□□ -0.67
TMEM116-209ENST00000550020 PCDH11YQ9BZA8 1340 aa10.86□□□□□ -0.67
TMEM116-209ENST00000550020 RGPD2P0DJD1 1756 aa10.86□□□□□ -0.67
TMEM116-209ENST00000550020 IL1RAPL2Q9NP60 686 aa10.86□□□□□ -0.67
TMEM116-209ENST00000550020 SIPA1L3O60292 1781 aaPredicted RBP10.85□□□□□ -0.67
TMEM116-209ENST00000550020 NEK4P51957 841 aa10.85□□□□□ -0.67
TMEM116-209ENST00000550020 NUTM1Q86Y26 1132 aa10.85□□□□□ -0.67
TMEM116-209ENST00000550020 EVI5LQ96CN4 794 aa10.85□□□□□ -0.67
TMEM116-209ENST00000550020 INTS4Q96HW7 963 aaKnown RBP10.85□□□□□ -0.67
TMEM116-209ENST00000550020 RBM42Q9BTD8 480 aaKnown RBP10.85□□□□□ -0.67
TMEM116-209ENST00000550020 METTL22Q9BUU2 404 aaPredicted RBP10.85□□□□□ -0.67
TMEM116-209ENST00000550020 DIAPH3Q9NSV4 1193 aa10.85□□□□□ -0.67
TMEM116-209ENST00000550020 COL15A1P39059 1388 aa10.85□□□□□ -0.67
TMEM116-209ENST00000550020 KDM6AO15550 1401 aaPredicted RBP10.84□□□□□ -0.67
TMEM116-209ENST00000550020 ERVV-2B6SEH9 535 aa10.84□□□□□ -0.67
TMEM116-209ENST00000550020 MRE11P49959 708 aa10.84□□□□□ -0.67
TMEM116-209ENST00000550020 ANKRD13DQ6ZTN6 518 aa10.84□□□□□ -0.67
TMEM116-209ENST00000550020 NFATC2IPQ8NCF5 419 aa10.84□□□□□ -0.67
TMEM116-209ENST00000550020 PI4K2BQ8TCG2 481 aa10.84□□□□□ -0.67
TMEM116-209ENST00000550020 PRDM11Q9NQV5 511 aa10.84□□□□□ -0.67
TMEM116-209ENST00000550020 MEGF6O75095 1541 aa10.84□□□□□ -0.67
TMEM116-209ENST00000550020 WDR17Q8IZU2 1322 aa10.84□□□□□ -0.67
TMEM116-209ENST00000550020 RAD50Q92878 1312 aa10.84□□□□□ -0.67
TMEM116-209ENST00000550020 COL18A1P39060 1754 aa10.83□□□□□ -0.68
TMEM116-209ENST00000550020 SGSM2O43147 1006 aa10.83□□□□□ -0.68
TMEM116-209ENST00000550020 CD2BP2O95400 341 aaKnown RBP10.83□□□□□ -0.68
TMEM116-209ENST00000550020 ANXA1P04083 346 aa10.83□□□□□ -0.68
TMEM116-209ENST00000550020 PDIA4P13667 645 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms