RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 BCL2L12Q9HB09 334 aa21.33■■□□□ 1.01
COX6A1-203ENST00000550009 COL15A1P39059 1388 aa21.33■■□□□ 1
COX6A1-203ENST00000550009 ARFGEF1Q9Y6D6 1849 aa21.32■■□□□ 1
COX6A1-203ENST00000550009 GRIN3BO60391 1043 aa21.32■■□□□ 1
COX6A1-203ENST00000550009 KCNA3P22001 575 aa21.32■■□□□ 1
COX6A1-203ENST00000550009 TEFQ10587 303 aa21.32■■□□□ 1
COX6A1-203ENST00000550009 ZNF790Q6PG37 636 aa21.32■■□□□ 1
COX6A1-203ENST00000550009 PARP3Q9Y6F1 533 aa21.32■■□□□ 1
COX6A1-203ENST00000550009 NRXN2Q9P2S2 1712 aa21.32■■□□□ 1
COX6A1-203ENST00000550009 TM4SF1P30408 202 aa21.31■■□□□ 1
COX6A1-203ENST00000550009 PIP4K2AP48426 406 aaPredicted RBP21.31■■□□□ 1
COX6A1-203ENST00000550009 HEG1Q9ULI3 1381 aa21.31■■□□□ 1
COX6A1-203ENST00000550009 ANKRD31Q8N7Z5 1873 aa21.3■■□□□ 1
COX6A1-203ENST00000550009 POLRMTO00411 1230 aaKnown RBP21.3■■□□□ 1
COX6A1-203ENST00000550009 NUDCQ9Y266 331 aa21.3■■□□□ 1
COX6A1-203ENST00000550009 SCN7AQ01118 1682 aa21.3■■□□□ 1
COX6A1-203ENST00000550009 TTC5Q8N0Z6 440 aa21.29■■□□□ 1
COX6A1-203ENST00000550009 A1BGP04217 495 aa21.28■■□□□ 1
COX6A1-203ENST00000550009 CHRNA5P30532 468 aa21.28■■□□□ 1
COX6A1-203ENST00000550009 NFIXQ14938 502 aa21.28■■□□□ 1
COX6A1-203ENST00000550009 VSIG10Q8N0Z9 540 aa21.28■■□□□ 1
COX6A1-203ENST00000550009 BCS1LQ9Y276 419 aa21.28■■□□□ 1
COX6A1-203ENST00000550009 SBF1O95248 1867 aa21.28■■□□□ 1
COX6A1-203ENST00000550009 ATP10DQ9P241 1426 aa21.28■■□□□ 1
COX6A1-203ENST00000550009 BCORQ6W2J9 1755 aa21.28■■□□□ 1
COX6A1-203ENST00000550009 BTBD11A6QL63 1104 aa21.27■■□□□ 1
COX6A1-203ENST00000550009 ZPR1O75312 459 aa21.27■■□□□ 1
COX6A1-203ENST00000550009 FCHSD2O94868 740 aa21.27■■□□□ 1
COX6A1-203ENST00000550009 DDX10Q13206 875 aaKnown RBP21.27■■□□□ 1
COX6A1-203ENST00000550009 MIS18AQ9NYP9 233 aa21.27■■□□□ 1
COX6A1-203ENST00000550009 NARFQ9UHQ1 456 aa21.27■■□□□ 1
COX6A1-203ENST00000550009 CCDC88AQ3V6T2 1871 aa21.26■□□□□ 0.99
COX6A1-203ENST00000550009 ADCY9O60503 1353 aa21.26■□□□□ 0.99
COX6A1-203ENST00000550009 EIF5P55010 431 aaKnown RBP21.26■□□□□ 0.99
COX6A1-203ENST00000550009 ZNF526Q8TF50 670 aaPredicted RBP21.26■□□□□ 0.99
COX6A1-203ENST00000550009 USP16Q9Y5T5 823 aa21.26■□□□□ 0.99
COX6A1-203ENST00000550009 CACNA1SQ13698 1873 aa21.26■□□□□ 0.99
COX6A1-203ENST00000550009 KDM3BQ7LBC6 1761 aa21.25■□□□□ 0.99
COX6A1-203ENST00000550009 DLEC1Q9Y238 1755 aa21.25■□□□□ 0.99
COX6A1-203ENST00000550009 TGFB2P61812 414 aa21.25■□□□□ 0.99
COX6A1-203ENST00000550009 PLEKHF1Q96S99 279 aa21.25■□□□□ 0.99
COX6A1-203ENST00000550009 THUMPD2Q9BTF0 503 aaKnown RBP21.25■□□□□ 0.99
COX6A1-203ENST00000550009 TBC1D2BQ9UPU7 963 aa21.25■□□□□ 0.99
COX6A1-203ENST00000550009 ZNF330Q9Y3S2 320 aaPredicted RBP21.25■□□□□ 0.99
COX6A1-203ENST00000550009 CEP350Q5VT06 3117 aa21.25■□□□□ 0.99
COX6A1-203ENST00000550009 CARMIL3Q8ND23 1372 aa21.24■□□□□ 0.99
COX6A1-203ENST00000550009 BICDL1Q6ZP65 573 aa21.24■□□□□ 0.99
COX6A1-203ENST00000550009 CCDC24Q8N4L8 307 aa21.23■□□□□ 0.99
COX6A1-203ENST00000550009 FMNL2Q96PY5 1086 aa21.23■□□□□ 0.99
COX6A1-203ENST00000550009 COL11A2P13942 1736 aaPredicted RBP21.23■□□□□ 0.99
COX6A1-203ENST00000550009 TBC1D9BQ66K14 1250 aa21.22■□□□□ 0.99
COX6A1-203ENST00000550009 LAMB4A4D0S4 1761 aa21.21■□□□□ 0.99
COX6A1-203ENST00000550009 STARD3NLO95772 234 aa21.21■□□□□ 0.99
COX6A1-203ENST00000550009 C1QTNF8P60827 252 aa21.2■□□□□ 0.98
COX6A1-203ENST00000550009 RTF1Q92541 710 aaKnown RBP21.2■□□□□ 0.98
COX6A1-203ENST00000550009 SERPINB2P05120 415 aa21.19■□□□□ 0.98
COX6A1-203ENST00000550009 ARHGAP27Q6ZUM4 889 aa21.19■□□□□ 0.98
COX6A1-203ENST00000550009 NBPF26B4DH59 902 aa21.17■□□□□ 0.98
COX6A1-203ENST00000550009 GIGYF1O75420 1035 aaPredicted RBP21.17■□□□□ 0.98
COX6A1-203ENST00000550009 CAMTA2O94983 1202 aa21.17■□□□□ 0.98
COX6A1-203ENST00000550009 NBPF10Q6P3W6 841 aaKnown RBP21.17■□□□□ 0.98
COX6A1-203ENST00000550009 NBPF15Q8N660 670 aa21.17■□□□□ 0.98
COX6A1-203ENST00000550009 NUP98P52948 1817 aa21.15■□□□□ 0.98
COX6A1-203ENST00000550009 IL6STP40189 918 aaPredicted RBP21.15■□□□□ 0.98
COX6A1-203ENST00000550009 NFE2L2Q16236 605 aa21.15■□□□□ 0.98
COX6A1-203ENST00000550009 TEX13AQ9BXU3 409 aaPredicted RBP21.15■□□□□ 0.98
COX6A1-203ENST00000550009 PIM2Q9P1W9 311 aa21.15■□□□□ 0.98
COX6A1-203ENST00000550009 TAF7Q15545 349 aaPredicted RBP21.14■□□□□ 0.97
COX6A1-203ENST00000550009 SLX4Q8IY92 1834 aa21.13■□□□□ 0.97
COX6A1-203ENST00000550009 HTATSF1O43719 755 aaKnown RBP21.13■□□□□ 0.97
COX6A1-203ENST00000550009 DALRD3Q5D0E6 543 aaKnown RBP21.13■□□□□ 0.97
COX6A1-203ENST00000550009 A0A087WZG4 1122 aa21.12■□□□□ 0.97
COX6A1-203ENST00000550009 SNRPA1P09661 255 aaKnown RBP21.12■□□□□ 0.97
COX6A1-203ENST00000550009 PRELPP51888 382 aa21.12■□□□□ 0.97
COX6A1-203ENST00000550009 RASSF7Q02833 373 aa21.12■□□□□ 0.97
COX6A1-203ENST00000550009 DZIP3Q86Y13 1208 aaKnown RBP21.12■□□□□ 0.97
COX6A1-203ENST00000550009 CCDC146Q8IYE0 955 aa21.12■□□□□ 0.97
COX6A1-203ENST00000550009 GPBP1L1Q9HC44 474 aaPredicted RBP21.12■□□□□ 0.97
COX6A1-203ENST00000550009 SENP3-EIF4A1A0A087X0R7 540 aa21.11■□□□□ 0.97
COX6A1-203ENST00000550009 RALBP1Q15311 655 aa21.11■□□□□ 0.97
COX6A1-203ENST00000550009 PRR5LQ6MZQ0 368 aa21.11■□□□□ 0.97
COX6A1-203ENST00000550009 RRP7AQ9Y3A4 280 aaKnown RBP21.11■□□□□ 0.97
COX6A1-203ENST00000550009 C9orf131Q5VYM1 1079 aa21.1■□□□□ 0.97
COX6A1-203ENST00000550009 C2CD5Q86YS7 1000 aa21.1■□□□□ 0.97
COX6A1-203ENST00000550009 FER1L6Q2WGJ9 1857 aa21.09■□□□□ 0.97
COX6A1-203ENST00000550009 KIF3CO14782 793 aa21.08■□□□□ 0.97
COX6A1-203ENST00000550009 EIF4A1P60842 406 aaKnown RBP21.08■□□□□ 0.97
COX6A1-203ENST00000550009 HLFQ16534 295 aa21.08■□□□□ 0.97
COX6A1-203ENST00000550009 NGEFQ8N5V2 710 aa21.08■□□□□ 0.97
COX6A1-203ENST00000550009 ARFGEF2Q9Y6D5 1785 aa21.07■□□□□ 0.96
COX6A1-203ENST00000550009 TIAM2Q8IVF5 1701 aa21.07■□□□□ 0.96
COX6A1-203ENST00000550009 MYBBP1AQ9BQG0 1328 aaKnown RBP21.06■□□□□ 0.96
COX6A1-203ENST00000550009 MAPK8IP3Q9UPT6 1336 aa21.06■□□□□ 0.96
COX6A1-203ENST00000550009 TNRC6CQ9HCJ0 1690 aaKnown RBP21.06■□□□□ 0.96
COX6A1-203ENST00000550009 RIPK4P57078 832 aa21.06■□□□□ 0.96
COX6A1-203ENST00000550009 NMRK2Q9NPI5 230 aa21.06■□□□□ 0.96
COX6A1-203ENST00000550009 ZNF219Q9P2Y4 722 aaPredicted RBP21.06■□□□□ 0.96
COX6A1-203ENST00000550009 FAM177BA6PVY3 158 aa21.05■□□□□ 0.96
COX6A1-203ENST00000550009 TMPOP42166 694 aaKnown RBP21.05■□□□□ 0.96
COX6A1-203ENST00000550009 DICER1Q9UPY3 1922 aaKnown RBP21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms