RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 TMEM229AB2RXF0 380 aa9.99□□□□□ -0.81
CCDC38-208ENST00000549876 EPXP11678 715 aa9.99□□□□□ -0.81
CCDC38-208ENST00000549876 MTFR1Q15390 333 aa9.99□□□□□ -0.81
CCDC38-208ENST00000549876 BTBD6Q96KE9 485 aa9.99□□□□□ -0.81
CCDC38-208ENST00000549876 SUV39H2Q9H5I1 410 aa9.99□□□□□ -0.81
CCDC38-208ENST00000549876 IQSEC3Q9UPP2 1182 aaPredicted RBP9.99□□□□□ -0.81
CCDC38-208ENST00000549876 PRKCSHP14314 528 aaPredicted RBP9.98□□□□□ -0.81
CCDC38-208ENST00000549876 CDK2AP1O14519 115 aa9.97□□□□□ -0.81
CCDC38-208ENST00000549876 ATXN7O15265 892 aaPredicted RBP9.97□□□□□ -0.81
CCDC38-208ENST00000549876 SOX11P35716 441 aa9.97□□□□□ -0.81
CCDC38-208ENST00000549876 AIDAQ96BJ3 306 aa9.97□□□□□ -0.81
CCDC38-208ENST00000549876 USP3Q9Y6I4 520 aa9.97□□□□□ -0.81
CCDC38-208ENST00000549876 A0A1W2PNR3 127 aa9.96□□□□□ -0.82
CCDC38-208ENST00000549876 AMPD1P23109 780 aa9.96□□□□□ -0.82
CCDC38-208ENST00000549876 BAG6P46379 1132 aa9.96□□□□□ -0.82
CCDC38-208ENST00000549876 DGKGP49619 791 aa9.96□□□□□ -0.82
CCDC38-208ENST00000549876 TNP2Q05952 138 aa9.96□□□□□ -0.82
CCDC38-208ENST00000549876 SEMA3FQ13275 785 aa9.96□□□□□ -0.82
CCDC38-208ENST00000549876 FAM182BQ5T319 152 aa9.96□□□□□ -0.82
CCDC38-208ENST00000549876 SERTAD1Q9UHV2 236 aa9.96□□□□□ -0.82
CCDC38-208ENST00000549876 KLF15Q9UIH9 416 aa9.96□□□□□ -0.82
CCDC38-208ENST00000549876 PCDHGA11Q9Y5H2 935 aa9.96□□□□□ -0.82
CCDC38-208ENST00000549876 A6NJY4 79 aa9.95□□□□□ -0.82
CCDC38-208ENST00000549876 NEURL1BA8MQ27 555 aa9.95□□□□□ -0.82
CCDC38-208ENST00000549876 GNB5O14775 395 aa9.95□□□□□ -0.82
CCDC38-208ENST00000549876 MAPTP10636 758 aaKnown RBP9.95□□□□□ -0.82
CCDC38-208ENST00000549876 MCM6Q14566 821 aa9.94□□□□□ -0.82
CCDC38-208ENST00000549876 GRIN2CQ14957 1233 aa9.94□□□□□ -0.82
CCDC38-208ENST00000549876 ZIC5Q96T25 663 aa9.94□□□□□ -0.82
CCDC38-208ENST00000549876 ZDHHC3Q9NYG2 299 aa9.94□□□□□ -0.82
CCDC38-208ENST00000549876 DCDC2BA2VCK2 349 aa9.93□□□□□ -0.82
CCDC38-208ENST00000549876 PIK3CDO00329 1044 aa9.93□□□□□ -0.82
CCDC38-208ENST00000549876 NBPF1Q3BBV0 1214 aa9.93□□□□□ -0.82
CCDC38-208ENST00000549876 AVENQ9NQS1 362 aaPredicted RBP9.93□□□□□ -0.82
CCDC38-208ENST00000549876 K7ELQ4 463 aaPredicted RBP9.92□□□□□ -0.82
CCDC38-208ENST00000549876 PIK3R2O00459 728 aa9.92□□□□□ -0.82
CCDC38-208ENST00000549876 CD33P20138 364 aa9.92□□□□□ -0.82
CCDC38-208ENST00000549876 ARSJQ5FYB0 599 aaPredicted RBP9.92□□□□□ -0.82
CCDC38-208ENST00000549876 FAM157BP0CG42 384 aa9.91□□□□□ -0.82
CCDC38-208ENST00000549876 ADH6P28332 368 aa9.91□□□□□ -0.82
CCDC38-208ENST00000549876 CHSY3Q70JA7 882 aa9.91□□□□□ -0.82
CCDC38-208ENST00000549876 FCHSD1Q86WN1 690 aa9.91□□□□□ -0.82
CCDC38-208ENST00000549876 KHNYNO15037 678 aaKnown RBP9.9□□□□□ -0.82
CCDC38-208ENST00000549876 TATP17735 454 aaPredicted RBP9.9□□□□□ -0.82
CCDC38-208ENST00000549876 XP32Q5T750 250 aa9.9□□□□□ -0.82
CCDC38-208ENST00000549876 SAMD5Q5TGI4 173 aa9.9□□□□□ -0.82
CCDC38-208ENST00000549876 CABP1Q9NZU7 370 aa9.9□□□□□ -0.82
CCDC38-208ENST00000549876 ALG2Q9H553 416 aa9.89□□□□□ -0.83
CCDC38-208ENST00000549876 COG6Q9Y2V7 657 aa9.89□□□□□ -0.83
CCDC38-208ENST00000549876 C1QTNF9BB2RNN3 333 aa9.88□□□□□ -0.83
CCDC38-208ENST00000549876 FURINP09958 794 aa9.88□□□□□ -0.83
CCDC38-208ENST00000549876 EML3Q32P44 896 aa9.88□□□□□ -0.83
CCDC38-208ENST00000549876 CD163Q86VB7 1156 aa9.88□□□□□ -0.83
CCDC38-208ENST00000549876 STRN4Q9NRL3 753 aa9.88□□□□□ -0.83
CCDC38-208ENST00000549876 BACH1O14867 736 aa9.87□□□□□ -0.83
CCDC38-208ENST00000549876 EFSO43281 561 aa9.87□□□□□ -0.83
CCDC38-208ENST00000549876 LZTS3O60299 673 aaPredicted RBP9.87□□□□□ -0.83
CCDC38-208ENST00000549876 ZNF468Q5VIY5 522 aaPredicted RBP9.87□□□□□ -0.83
CCDC38-208ENST00000549876 NFATC2IPQ8NCF5 419 aa9.87□□□□□ -0.83
CCDC38-208ENST00000549876 ZDHHC1Q8WTX9 485 aa9.87□□□□□ -0.83
CCDC38-208ENST00000549876 NOP53Q9NZM5 478 aaKnown RBP9.87□□□□□ -0.83
CCDC38-208ENST00000549876 SCHIP1Q9P0W5 487 aaPredicted RBP9.87□□□□□ -0.83
CCDC38-208ENST00000549876 NOD1Q9Y239 953 aa9.87□□□□□ -0.83
CCDC38-208ENST00000549876 PARP3Q9Y6F1 533 aa9.87□□□□□ -0.83
CCDC38-208ENST00000549876 SKIP12755 728 aa9.86□□□□□ -0.83
CCDC38-208ENST00000549876 TXLNAP40222 546 aa9.86□□□□□ -0.83
CCDC38-208ENST00000549876 PCBP4P57723 403 aaKnown RBP9.86□□□□□ -0.83
CCDC38-208ENST00000549876 GTF2IP78347 998 aa9.86□□□□□ -0.83
CCDC38-208ENST00000549876 LAMC2Q13753 1193 aa9.86□□□□□ -0.83
CCDC38-208ENST00000549876 ZNF358Q9NW07 568 aa9.86□□□□□ -0.83
CCDC38-208ENST00000549876 CHRNA4P43681 627 aa9.85□□□□□ -0.83
CCDC38-208ENST00000549876 EPHA4P54764 986 aa9.85□□□□□ -0.83
CCDC38-208ENST00000549876 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.85□□□□□ -0.83
CCDC38-208ENST00000549876 MARK1Q9P0L2 795 aa9.85□□□□□ -0.83
CCDC38-208ENST00000549876 GJA3Q9Y6H8 435 aa9.85□□□□□ -0.83
CCDC38-208ENST00000549876 TEAD4Q15561 434 aa9.84□□□□□ -0.83
CCDC38-208ENST00000549876 C7orf43Q8WVR3 580 aa9.84□□□□□ -0.83
CCDC38-208ENST00000549876 TRIM11Q96F44 468 aa9.84□□□□□ -0.83
CCDC38-208ENST00000549876 MDFIQ99750 246 aa9.84□□□□□ -0.83
CCDC38-208ENST00000549876 EML1O00423 815 aa9.83□□□□□ -0.84
CCDC38-208ENST00000549876 NCOA4Q13772 614 aa9.83□□□□□ -0.84
CCDC38-208ENST00000549876 BICDL1Q6ZP65 573 aa9.83□□□□□ -0.84
CCDC38-208ENST00000549876 L3MBTL2Q969R5 705 aa9.83□□□□□ -0.84
CCDC38-208ENST00000549876 PRR12Q9ULL5 1215 aa9.83□□□□□ -0.84
CCDC38-208ENST00000549876 NOS2P35228 1153 aa9.81□□□□□ -0.84
CCDC38-208ENST00000549876 ELOA3CA0A087WX78 387 aaPredicted RBP9.8□□□□□ -0.84
CCDC38-208ENST00000549876 ELOA3DA6NLF2 546 aaPredicted RBP9.8□□□□□ -0.84
CCDC38-208ENST00000549876 ELOA3BQ3SY89 546 aa9.8□□□□□ -0.84
CCDC38-208ENST00000549876 SLC9A9Q8IVB4 645 aa9.8□□□□□ -0.84
CCDC38-208ENST00000549876 ELOA3Q8NG57 546 aa9.8□□□□□ -0.84
CCDC38-208ENST00000549876 GPC6Q9Y625 555 aaPredicted RBP9.8□□□□□ -0.84
CCDC38-208ENST00000549876 USP17L5A8MUK1 530 aa9.79□□□□□ -0.84
CCDC38-208ENST00000549876 PSME1Q06323 249 aa9.79□□□□□ -0.84
CCDC38-208ENST00000549876 LRRC69Q6ZNQ3 347 aa9.79□□□□□ -0.84
CCDC38-208ENST00000549876 SYT9Q86SS6 491 aa9.79□□□□□ -0.84
CCDC38-208ENST00000549876 TNS4Q8IZW8 715 aa9.79□□□□□ -0.84
CCDC38-208ENST00000549876 PLVAPQ9BX97 442 aa9.79□□□□□ -0.84
CCDC38-208ENST00000549876 TBCELQ5QJ74 424 aa9.78□□□□□ -0.84
CCDC38-208ENST00000549876 DEPDC4Q8N2C3 294 aa9.78□□□□□ -0.84
CCDC38-208ENST00000549876 POM121Q96HA1 1249 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms