RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 GNASQ5JWF2 1037 aa8.39□□□□□ -1.07
SNRPF-202ENST00000549580 C14orf37Q86TY3 774 aa8.39□□□□□ -1.07
SNRPF-202ENST00000549580 XAGE2Q96GT9 111 aa8.39□□□□□ -1.07
SNRPF-202ENST00000549580 CDCA7Q9BWT1 371 aaPredicted RBP8.39□□□□□ -1.07
SNRPF-202ENST00000549580 FAM182BQ5T319 152 aa8.38□□□□□ -1.07
SNRPF-202ENST00000549580 KRTAP4-7Q9BYR0 210 aa8.38□□□□□ -1.07
SNRPF-202ENST00000549580 PCDHGC4Q9Y5F7 938 aa8.38□□□□□ -1.07
SNRPF-202ENST00000549580 FIGNL1Q6PIW4 674 aa8.37□□□□□ -1.07
SNRPF-202ENST00000549580 ZCCHC2Q9C0B9 1178 aaKnown RBP8.37□□□□□ -1.07
SNRPF-202ENST00000549580 HYAL3O43820 417 aaPredicted RBP8.36□□□□□ -1.07
SNRPF-202ENST00000549580 TMEM214Q6NUQ4 689 aaKnown RBP8.36□□□□□ -1.07
SNRPF-202ENST00000549580 ESF1Q9H501 851 aaKnown RBP8.36□□□□□ -1.07
SNRPF-202ENST00000549580 NR1H3Q13133 447 aa8.35□□□□□ -1.07
SNRPF-202ENST00000549580 GPR37L1O60883 481 aa8.34□□□□□ -1.07
SNRPF-202ENST00000549580 RHBDD1Q8TEB9 315 aa8.34□□□□□ -1.07
SNRPF-202ENST00000549580 CCDC85AQ96PX6 553 aaPredicted RBP8.34□□□□□ -1.07
SNRPF-202ENST00000549580 APBA3O96018 575 aa8.33□□□□□ -1.08
SNRPF-202ENST00000549580 MAPTP10636 758 aaKnown RBP8.33□□□□□ -1.08
SNRPF-202ENST00000549580 CD33P20138 364 aa8.33□□□□□ -1.08
SNRPF-202ENST00000549580 ATP4AP20648 1035 aa8.33□□□□□ -1.08
SNRPF-202ENST00000549580 TNP2Q05952 138 aa8.33□□□□□ -1.08
SNRPF-202ENST00000549580 TSGA10IPQ3SY00 556 aa8.33□□□□□ -1.08
SNRPF-202ENST00000549580 TMEM259Q4ZIN3 620 aa8.33□□□□□ -1.08
SNRPF-202ENST00000549580 PRRT3Q5FWE3 981 aa8.33□□□□□ -1.08
SNRPF-202ENST00000549580 ZNF468Q5VIY5 522 aaPredicted RBP8.33□□□□□ -1.08
SNRPF-202ENST00000549580 NLRP8Q86W28 1048 aa8.33□□□□□ -1.08
SNRPF-202ENST00000549580 PPARGC1BQ86YN6 1023 aaKnown RBP8.33□□□□□ -1.08
SNRPF-202ENST00000549580 MDFIQ99750 246 aa8.33□□□□□ -1.08
SNRPF-202ENST00000549580 SPDYE3A6NKU9 549 aa8.32□□□□□ -1.08
SNRPF-202ENST00000549580 ATXN7O15265 892 aaPredicted RBP8.32□□□□□ -1.08
SNRPF-202ENST00000549580 GTF2E1P29083 439 aaPredicted RBP8.32□□□□□ -1.08
SNRPF-202ENST00000549580 COL9A3Q14050 684 aaPredicted RBP8.32□□□□□ -1.08
SNRPF-202ENST00000549580 LCE1DQ5T752 114 aa8.32□□□□□ -1.08
SNRPF-202ENST00000549580 FAM229AH3BQW9 127 aa8.31□□□□□ -1.08
SNRPF-202ENST00000549580 H2AFB1P0C5Y9 115 aa8.31□□□□□ -1.08
SNRPF-202ENST00000549580 H2AFB2P0C5Z0 115 aa8.31□□□□□ -1.08
SNRPF-202ENST00000549580 PCBP4P57723 403 aaKnown RBP8.31□□□□□ -1.08
SNRPF-202ENST00000549580 MCCD1P59942 119 aaPredicted RBP8.31□□□□□ -1.08
SNRPF-202ENST00000549580 DCDC2BA2VCK2 349 aa8.3□□□□□ -1.08
SNRPF-202ENST00000549580 PCMTD1Q96MG8 357 aaPredicted RBP8.3□□□□□ -1.08
SNRPF-202ENST00000549580 MCTP1Q6DN14 999 aa8.29□□□□□ -1.08
SNRPF-202ENST00000549580 TBC1D9Q6ZT07 1266 aa8.29□□□□□ -1.08
SNRPF-202ENST00000549580 IL27Q8NEV9 243 aa8.29□□□□□ -1.08
SNRPF-202ENST00000549580 ELOA3CA0A087WX78 387 aaPredicted RBP8.28□□□□□ -1.08
SNRPF-202ENST00000549580 ELOA3DA6NLF2 546 aaPredicted RBP8.28□□□□□ -1.08
SNRPF-202ENST00000549580 PLA2G4AP47712 749 aa8.28□□□□□ -1.08
SNRPF-202ENST00000549580 ELOA3BQ3SY89 546 aa8.28□□□□□ -1.08
SNRPF-202ENST00000549580 ELOA3Q8NG57 546 aa8.28□□□□□ -1.08
SNRPF-202ENST00000549580 C1orf216Q8TAB5 229 aa8.28□□□□□ -1.08
SNRPF-202ENST00000549580 NACC1Q96RE7 527 aa8.28□□□□□ -1.08
SNRPF-202ENST00000549580 ETNK1Q9HBU6 452 aa8.28□□□□□ -1.08
SNRPF-202ENST00000549580 CEP126Q9P2H0 1117 aa8.28□□□□□ -1.08
SNRPF-202ENST00000549580 MYCP01106 439 aaPredicted RBP8.27□□□□□ -1.09
SNRPF-202ENST00000549580 ESCO1Q5FWF5 840 aa8.27□□□□□ -1.09
SNRPF-202ENST00000549580 ARXQ96QS3 562 aa8.27□□□□□ -1.09
SNRPF-202ENST00000549580 KHNYNO15037 678 aaKnown RBP8.26□□□□□ -1.09
SNRPF-202ENST00000549580 PRDM6Q9NQX0 595 aa8.26□□□□□ -1.09
SNRPF-202ENST00000549580 FAM157BP0CG42 384 aa8.25□□□□□ -1.09
SNRPF-202ENST00000549580 ADGRE1Q14246 886 aa8.25□□□□□ -1.09
SNRPF-202ENST00000549580 TLR1Q15399 786 aa8.25□□□□□ -1.09
SNRPF-202ENST00000549580 GRIK4Q16099 956 aa8.25□□□□□ -1.09
SNRPF-202ENST00000549580 A0A1W2PNR3 127 aa8.24□□□□□ -1.09
SNRPF-202ENST00000549580 MTMR14Q8NCE2 650 aa8.24□□□□□ -1.09
SNRPF-202ENST00000549580 ZNF592Q92610 1267 aa8.24□□□□□ -1.09
SNRPF-202ENST00000549580 STRN4Q9NRL3 753 aa8.24□□□□□ -1.09
SNRPF-202ENST00000549580 PRR12Q9ULL5 1215 aa8.24□□□□□ -1.09
SNRPF-202ENST00000549580 ZNF330Q9Y3S2 320 aaPredicted RBP8.24□□□□□ -1.09
SNRPF-202ENST00000549580 AIDAQ96BJ3 306 aa8.23□□□□□ -1.09
SNRPF-202ENST00000549580 STARD13Q9Y3M8 1113 aa8.23□□□□□ -1.09
SNRPF-202ENST00000549580 M0R082 166 aa8.22□□□□□ -1.09
SNRPF-202ENST00000549580 EFSO43281 561 aa8.22□□□□□ -1.09
SNRPF-202ENST00000549580 NID1P14543 1247 aa8.22□□□□□ -1.09
SNRPF-202ENST00000549580 ALAS2P22557 587 aa8.22□□□□□ -1.09
SNRPF-202ENST00000549580 TRIM28Q13263 835 aaKnown RBP8.22□□□□□ -1.09
SNRPF-202ENST00000549580 MBTPS1Q14703 1052 aa8.22□□□□□ -1.09
SNRPF-202ENST00000549580 ZNF417Q8TAU3 575 aa8.22□□□□□ -1.09
SNRPF-202ENST00000549580 ZNF587Q96SQ5 575 aaPredicted RBP8.22□□□□□ -1.09
SNRPF-202ENST00000549580 GOPCQ9HD26 462 aa8.22□□□□□ -1.09
SNRPF-202ENST00000549580 SNRKQ9NRH2 765 aa8.22□□□□□ -1.09
SNRPF-202ENST00000549580 ADARB2-AS1A8MUL3 147 aa8.21□□□□□ -1.1
SNRPF-202ENST00000549580 ZNF295-AS1Q8N0V1 137 aa8.21□□□□□ -1.1
SNRPF-202ENST00000549580 COL17A1Q9UMD9 1497 aaPredicted RBP8.2□□□□□ -1.1
SNRPF-202ENST00000549580 C9orf172C9J069 976 aa8.2□□□□□ -1.1
SNRPF-202ENST00000549580 ALBP02768 609 aa8.2□□□□□ -1.1
SNRPF-202ENST00000549580 SAMD5Q5TGI4 173 aa8.2□□□□□ -1.1
SNRPF-202ENST00000549580 C8orf86Q6ZUL3 223 aa8.2□□□□□ -1.1
SNRPF-202ENST00000549580 SYT9Q86SS6 491 aa8.2□□□□□ -1.1
SNRPF-202ENST00000549580 FMNL2Q96PY5 1086 aa8.2□□□□□ -1.1
SNRPF-202ENST00000549580 MARK1Q9P0L2 795 aa8.2□□□□□ -1.1
SNRPF-202ENST00000549580 NDUFB9Q9Y6M9 179 aa8.2□□□□□ -1.1
SNRPF-202ENST00000549580 COBLO75128 1261 aa8.19□□□□□ -1.1
SNRPF-202ENST00000549580 SELPP16109 830 aa8.19□□□□□ -1.1
SNRPF-202ENST00000549580 SCNN1DP51172 638 aa8.19□□□□□ -1.1
SNRPF-202ENST00000549580 LAMC2Q13753 1193 aa8.19□□□□□ -1.1
SNRPF-202ENST00000549580 OXLD1Q5BKU9 147 aa8.19□□□□□ -1.1
SNRPF-202ENST00000549580 TXNRD3Q86VQ6 643 aa8.19□□□□□ -1.1
SNRPF-202ENST00000549580 MICALL1Q8N3F8 863 aa8.19□□□□□ -1.1
SNRPF-202ENST00000549580 PHTF2Q8N3S3 785 aa8.19□□□□□ -1.1
SNRPF-202ENST00000549580 DOLKQ9UPQ8 538 aa8.19□□□□□ -1.1
SNRPF-202ENST00000549580 ARID1BQ8NFD5 2236 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms