RNA–Protein interactions for RNA: ENST00000549554.1

TUBA1C-205, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-205ENST00000549554 COL15A1P39059 1388 aa26.17■■□□□ 1.78
TUBA1C-205ENST00000549554 USP42Q9H9J4 1324 aaKnown RBP26.16■■□□□ 1.78
TUBA1C-205ENST00000549554 KCNQ3O43525 872 aa26.16■■□□□ 1.78
TUBA1C-205ENST00000549554 GYS1P13807 737 aa26.16■■□□□ 1.78
TUBA1C-205ENST00000549554 MMP10P09238 476 aa26.15■■□□□ 1.78
TUBA1C-205ENST00000549554 RUNDC1Q96C34 613 aa26.15■■□□□ 1.78
TUBA1C-205ENST00000549554 ZPR1O75312 459 aa26.14■■□□□ 1.78
TUBA1C-205ENST00000549554 CANXP27824 592 aaKnown RBP26.14■■□□□ 1.78
TUBA1C-205ENST00000549554 RIPK4P57078 832 aa26.14■■□□□ 1.78
TUBA1C-205ENST00000549554 LAMB4A4D0S4 1761 aa26.14■■□□□ 1.78
TUBA1C-205ENST00000549554 TMPOP42166 694 aaKnown RBP26.13■■□□□ 1.77
TUBA1C-205ENST00000549554 CCDC146Q8IYE0 955 aa26.13■■□□□ 1.77
TUBA1C-205ENST00000549554 KIF13BQ9NQT8 1826 aa26.12■■□□□ 1.77
TUBA1C-205ENST00000549554 SNRPA1P09661 255 aaKnown RBP26.12■■□□□ 1.77
TUBA1C-205ENST00000549554 NLGN2Q8NFZ4 835 aa26.12■■□□□ 1.77
TUBA1C-205ENST00000549554 SRP68Q9UHB9 627 aaKnown RBP26.12■■□□□ 1.77
TUBA1C-205ENST00000549554 ADAMTS8Q9UP79 889 aa26.12■■□□□ 1.77
TUBA1C-205ENST00000549554 A0A087WZG4 1122 aa26.11■■□□□ 1.77
TUBA1C-205ENST00000549554 ANP32CO43423 234 aa26.11■■□□□ 1.77
TUBA1C-205ENST00000549554 NPM2Q86SE8 214 aaKnown RBP26.11■■□□□ 1.77
TUBA1C-205ENST00000549554 PARP3Q9Y6F1 533 aa26.11■■□□□ 1.77
TUBA1C-205ENST00000549554 THUMPD2Q9BTF0 503 aaKnown RBP26.1■■□□□ 1.77
TUBA1C-205ENST00000549554 NARFQ9UHQ1 456 aa26.1■■□□□ 1.77
TUBA1C-205ENST00000549554 GPR162Q16538 588 aa26.09■■□□□ 1.77
TUBA1C-205ENST00000549554 CHD4Q14839 1912 aa26.08■■□□□ 1.77
TUBA1C-205ENST00000549554 IL6STP40189 918 aaPredicted RBP26.08■■□□□ 1.77
TUBA1C-205ENST00000549554 EIF5P55010 431 aaKnown RBP26.08■■□□□ 1.77
TUBA1C-205ENST00000549554 USPL1Q5W0Q7 1092 aa26.08■■□□□ 1.77
TUBA1C-205ENST00000549554 MIS18AQ9NYP9 233 aa26.08■■□□□ 1.77
TUBA1C-205ENST00000549554 SCN7AQ01118 1682 aa26.08■■□□□ 1.77
TUBA1C-205ENST00000549554 FKBP8Q14318 412 aa26.07■■□□□ 1.76
TUBA1C-205ENST00000549554 PELP1Q8IZL8 1130 aaKnown RBP26.07■■□□□ 1.76
TUBA1C-205ENST00000549554 ZNF330Q9Y3S2 320 aaPredicted RBP26.07■■□□□ 1.76
TUBA1C-205ENST00000549554 NEUROD2Q15784 382 aa26.06■■□□□ 1.76
TUBA1C-205ENST00000549554 RRP7AQ9Y3A4 280 aaKnown RBP26.06■■□□□ 1.76
TUBA1C-205ENST00000549554 USP16Q9Y5T5 823 aa26.06■■□□□ 1.76
TUBA1C-205ENST00000549554 A1BGP04217 495 aa26.05■■□□□ 1.76
TUBA1C-205ENST00000549554 C10orf71Q711Q0 1435 aa26.05■■□□□ 1.76
TUBA1C-205ENST00000549554 BABAM1Q9NWV8 329 aa26.04■■□□□ 1.76
TUBA1C-205ENST00000549554 TSPYL4Q9UJ04 414 aa26.04■■□□□ 1.76
TUBA1C-205ENST00000549554 BCORQ6W2J9 1755 aa26.03■■□□□ 1.76
TUBA1C-205ENST00000549554 PRAMEF22A3QJZ6 481 aa26.03■■□□□ 1.76
TUBA1C-205ENST00000549554 AFDNP55196 1824 aaKnown RBP26.02■■□□□ 1.76
TUBA1C-205ENST00000549554 EIF4A1P60842 406 aaKnown RBP26.01■■□□□ 1.75
TUBA1C-205ENST00000549554 N4BP2Q86UW6 1770 aaPredicted RBP26.01■■□□□ 1.75
TUBA1C-205ENST00000549554 KIAA1551Q9HCM1 1747 aa26■■□□□ 1.75
TUBA1C-205ENST00000549554 TM4SF1P30408 202 aa26■■□□□ 1.75
TUBA1C-205ENST00000549554 DDR1Q08345 913 aa26■■□□□ 1.75
TUBA1C-205ENST00000549554 GIGYF1O75420 1035 aaPredicted RBP25.99■■□□□ 1.75
TUBA1C-205ENST00000549554 TGFB2P61812 414 aa25.99■■□□□ 1.75
TUBA1C-205ENST00000549554 NRXN2Q9P2S2 1712 aa25.98■■□□□ 1.75
TUBA1C-205ENST00000549554 POLRMTO00411 1230 aaKnown RBP25.98■■□□□ 1.75
TUBA1C-205ENST00000549554 GRIN3BO60391 1043 aa25.98■■□□□ 1.75
TUBA1C-205ENST00000549554 YY1P25490 414 aa25.98■■□□□ 1.75
TUBA1C-205ENST00000549554 BCL2L12Q9HB09 334 aa25.98■■□□□ 1.75
TUBA1C-205ENST00000549554 MRS2Q9HD23 443 aa25.98■■□□□ 1.75
TUBA1C-205ENST00000549554 TBC1D2BQ9UPU7 963 aa25.98■■□□□ 1.75
TUBA1C-205ENST00000549554 PXDNLA1KZ92 1463 aa25.98■■□□□ 1.75
TUBA1C-205ENST00000549554 NFIXQ14938 502 aa25.97■■□□□ 1.75
TUBA1C-205ENST00000549554 DZIP3Q86Y13 1208 aaKnown RBP25.97■■□□□ 1.75
TUBA1C-205ENST00000549554 TRIM35Q9UPQ4 493 aa25.97■■□□□ 1.75
TUBA1C-205ENST00000549554 CCDC184Q52MB2 194 aa25.96■■□□□ 1.75
TUBA1C-205ENST00000549554 APAF1O14727 1248 aa25.95■■□□□ 1.74
TUBA1C-205ENST00000549554 PIP4K2AP48426 406 aaPredicted RBP25.95■■□□□ 1.74
TUBA1C-205ENST00000549554 BRCA1P38398 1863 aaKnown RBP25.94■■□□□ 1.74
TUBA1C-205ENST00000549554 YBX3P16989 372 aaKnown RBP eCLIP25.94■■□□□ 1.74
TUBA1C-205ENST00000549554 NBPF26B4DH59 902 aa25.93■■□□□ 1.74
TUBA1C-205ENST00000549554 CAMTA2O94983 1202 aa25.93■■□□□ 1.74
TUBA1C-205ENST00000549554 NBPF10Q6P3W6 841 aaKnown RBP25.93■■□□□ 1.74
TUBA1C-205ENST00000549554 NBPF15Q8N660 670 aa25.93■■□□□ 1.74
TUBA1C-205ENST00000549554 ZNF652Q9Y2D9 606 aa25.93■■□□□ 1.74
TUBA1C-205ENST00000549554 LAS1LQ9Y4W2 734 aaKnown RBP25.93■■□□□ 1.74
TUBA1C-205ENST00000549554 ERBB4Q15303 1308 aa25.92■■□□□ 1.74
TUBA1C-205ENST00000549554 SERPINB2P05120 415 aa25.92■■□□□ 1.74
TUBA1C-205ENST00000549554 CALD1Q05682 793 aaKnown RBP25.92■■□□□ 1.74
TUBA1C-205ENST00000549554 BICDL1Q6ZP65 573 aa25.92■■□□□ 1.74
TUBA1C-205ENST00000549554 CHL1O00533 1208 aa25.91■■□□□ 1.74
TUBA1C-205ENST00000549554 TBC1D9BQ66K14 1250 aa25.91■■□□□ 1.74
TUBA1C-205ENST00000549554 CARMIL3Q8ND23 1372 aa25.91■■□□□ 1.74
TUBA1C-205ENST00000549554 RGL2O15211 777 aa25.9■■□□□ 1.74
TUBA1C-205ENST00000549554 A0A0G2JLW4 131 aa25.89■■□□□ 1.74
TUBA1C-205ENST00000549554 DPEP1P16444 411 aa25.89■■□□□ 1.74
TUBA1C-205ENST00000549554 CLEC4GQ6UXB4 293 aa25.89■■□□□ 1.74
TUBA1C-205ENST00000549554 SETDB2Q96T68 719 aa25.89■■□□□ 1.74
TUBA1C-205ENST00000549554 CFAP44Q96MT7 982 aa25.88■■□□□ 1.73
TUBA1C-205ENST00000549554 WWC3Q9ULE0 1092 aa25.88■■□□□ 1.73
TUBA1C-205ENST00000549554 ARFGEF1Q9Y6D6 1849 aa25.88■■□□□ 1.73
TUBA1C-205ENST00000549554 DLEC1Q9Y238 1755 aa25.87■■□□□ 1.73
TUBA1C-205ENST00000549554 NUP98P52948 1817 aa25.86■■□□□ 1.73
TUBA1C-205ENST00000549554 NPHP1O15259 732 aa25.85■■□□□ 1.73
TUBA1C-205ENST00000549554 MYL6BP14649 208 aa25.85■■□□□ 1.73
TUBA1C-205ENST00000549554 EIF2S2P20042 333 aaKnown RBP25.85■■□□□ 1.73
TUBA1C-205ENST00000549554 KIF6Q6ZMV9 814 aa25.85■■□□□ 1.73
TUBA1C-205ENST00000549554 NGEFQ8N5V2 710 aa25.85■■□□□ 1.73
TUBA1C-205ENST00000549554 BCS1LQ9Y276 419 aa25.85■■□□□ 1.73
TUBA1C-205ENST00000549554 GNAI1P63096 354 aa25.84■■□□□ 1.73
TUBA1C-205ENST00000549554 ANKRD31Q8N7Z5 1873 aa25.84■■□□□ 1.73
TUBA1C-205ENST00000549554 IFT57Q9NWB7 429 aa25.84■■□□□ 1.73
TUBA1C-205ENST00000549554 PIM2Q9P1W9 311 aa25.84■■□□□ 1.73
TUBA1C-205ENST00000549554 ERVV-1B6SEH8 477 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms