RNA–Protein interactions for RNA: ENST00000548560.1

SP1-203, Transcript of Sp1 transcription factor, humanhuman

TSL 2

Gene SP1, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-203ENST00000548560 MRS2Q9HD23 443 aa11.48□□□□□ -0.57
SP1-203ENST00000548560 TFCP2L1Q9NZI6 479 aa11.48□□□□□ -0.57
SP1-203ENST00000548560 CEMIPQ8WUJ3 1361 aa11.48□□□□□ -0.57
SP1-203ENST00000548560 KDM3BQ7LBC6 1761 aa11.47□□□□□ -0.57
SP1-203ENST00000548560 PTCD1O75127 700 aaKnown RBP11.47□□□□□ -0.57
SP1-203ENST00000548560 LMOD3Q0VAK6 560 aa11.47□□□□□ -0.57
SP1-203ENST00000548560 CCDC146Q8IYE0 955 aa11.47□□□□□ -0.57
SP1-203ENST00000548560 REM2Q8IYK8 340 aaPredicted RBP11.47□□□□□ -0.57
SP1-203ENST00000548560 IL17REQ8NFR9 667 aa11.47□□□□□ -0.57
SP1-203ENST00000548560 RUNDC1Q96C34 613 aa11.47□□□□□ -0.57
SP1-203ENST00000548560 KCPQ6ZWJ8 1503 aa11.46□□□□□ -0.57
SP1-203ENST00000548560 RIOK3O14730 519 aaKnown RBP11.46□□□□□ -0.57
SP1-203ENST00000548560 PRR29P0C7W0 189 aa11.46□□□□□ -0.57
SP1-203ENST00000548560 NUBP1P53384 320 aa11.46□□□□□ -0.57
SP1-203ENST00000548560 SLC39A6Q13433 755 aa11.46□□□□□ -0.57
SP1-203ENST00000548560 TPRNQ4KMQ1 711 aa11.46□□□□□ -0.57
SP1-203ENST00000548560 MCM10Q7L590 875 aa11.46□□□□□ -0.57
SP1-203ENST00000548560 ADAMTS8Q9UP79 889 aa11.46□□□□□ -0.57
SP1-203ENST00000548560 MYH14Q7Z406 1995 aaKnown RBP11.46□□□□□ -0.58
SP1-203ENST00000548560 LAMB4A4D0S4 1761 aa11.46□□□□□ -0.58
SP1-203ENST00000548560 COL24A1Q17RW2 1714 aa11.46□□□□□ -0.58
SP1-203ENST00000548560 BTBD11A6QL63 1104 aa11.45□□□□□ -0.58
SP1-203ENST00000548560 LINC00116Q8NCU8 138 aa11.45□□□□□ -0.58
SP1-203ENST00000548560 C4AP0C0L4 1744 aa11.45□□□□□ -0.58
SP1-203ENST00000548560 PNPLA7Q6ZV29 1317 aa11.44□□□□□ -0.58
SP1-203ENST00000548560 TMPOP42166 694 aaKnown RBP11.44□□□□□ -0.58
SP1-203ENST00000548560 RIPK4P57078 832 aa11.44□□□□□ -0.58
SP1-203ENST00000548560 ITPK1Q13572 414 aa11.44□□□□□ -0.58
SP1-203ENST00000548560 DCTN1Q14203 1278 aa11.44□□□□□ -0.58
SP1-203ENST00000548560 ZNF790Q6PG37 636 aa11.44□□□□□ -0.58
SP1-203ENST00000548560 FLAD1Q8NFF5 587 aa11.44□□□□□ -0.58
SP1-203ENST00000548560 GNPATO15228 680 aa11.43□□□□□ -0.58
SP1-203ENST00000548560 NBR1Q14596 966 aa11.43□□□□□ -0.58
SP1-203ENST00000548560 NEUROD2Q15784 382 aa11.43□□□□□ -0.58
SP1-203ENST00000548560 RNF25Q96BH1 459 aaPredicted RBP11.43□□□□□ -0.58
SP1-203ENST00000548560 PDGFDQ9GZP0 370 aaPredicted RBP11.43□□□□□ -0.58
SP1-203ENST00000548560 SPON1Q9HCB6 807 aa11.43□□□□□ -0.58
SP1-203ENST00000548560 CNTNAP4Q9C0A0 1308 aa11.42□□□□□ -0.58
SP1-203ENST00000548560 PHF14O94880 888 aa11.42□□□□□ -0.58
SP1-203ENST00000548560 ZBTB7AO95365 584 aa11.42□□□□□ -0.58
SP1-203ENST00000548560 SSFA2P28290 1259 aa11.42□□□□□ -0.58
SP1-203ENST00000548560 TAF7Q15545 349 aaPredicted RBP11.42□□□□□ -0.58
SP1-203ENST00000548560 CCDC184Q52MB2 194 aa11.42□□□□□ -0.58
SP1-203ENST00000548560 PNISRQ8TF01 805 aaKnown RBP11.42□□□□□ -0.58
SP1-203ENST00000548560 SLC16A10Q8TF71 515 aa11.42□□□□□ -0.58
SP1-203ENST00000548560 FMNL2Q96PY5 1086 aa11.42□□□□□ -0.58
SP1-203ENST00000548560 SLC4A9Q96Q91 983 aa11.42□□□□□ -0.58
SP1-203ENST00000548560 MTFR1LQ9H019 292 aa11.42□□□□□ -0.58
SP1-203ENST00000548560 RRP7AQ9Y3A4 280 aaKnown RBP11.42□□□□□ -0.58
SP1-203ENST00000548560 HEG1Q9ULI3 1381 aa11.41□□□□□ -0.58
SP1-203ENST00000548560 UTRNP46939 3433 aa11.41□□□□□ -0.58
SP1-203ENST00000548560 PPP1R1BQ9UD71 204 aaPredicted RBP11.41□□□□□ -0.58
SP1-203ENST00000548560 RTCBQ9Y3I0 505 aaKnown RBP11.41□□□□□ -0.58
SP1-203ENST00000548560 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.4□□□□□ -0.58
SP1-203ENST00000548560 CRKLP46109 303 aaKnown RBP11.4□□□□□ -0.58
SP1-203ENST00000548560 RC3H1Q5TC82 1133 aaKnown RBP11.4□□□□□ -0.58
SP1-203ENST00000548560 DNAJC10Q8IXB1 793 aa11.4□□□□□ -0.58
SP1-203ENST00000548560 ZNF496Q96IT1 587 aaPredicted RBP11.4□□□□□ -0.58
SP1-203ENST00000548560 THUMPD2Q9BTF0 503 aaKnown RBP11.4□□□□□ -0.58
SP1-203ENST00000548560 TEX13AQ9BXU3 409 aaPredicted RBP11.4□□□□□ -0.58
SP1-203ENST00000548560 STK25O00506 426 aa11.39□□□□□ -0.59
SP1-203ENST00000548560 APAF1O14727 1248 aa11.39□□□□□ -0.59
SP1-203ENST00000548560 STARD3NLO95772 234 aa11.39□□□□□ -0.59
SP1-203ENST00000548560 POLD1P28340 1107 aa11.39□□□□□ -0.59
SP1-203ENST00000548560 COL23A1Q86Y22 540 aaPredicted RBP11.39□□□□□ -0.59
SP1-203ENST00000548560 CCDC87Q9NVE4 849 aa11.39□□□□□ -0.59
SP1-203ENST00000548560 TSPYL4Q9UJ04 414 aa11.39□□□□□ -0.59
SP1-203ENST00000548560 RPS6KA4O75676 772 aa11.38□□□□□ -0.59
SP1-203ENST00000548560 PTGER2P43116 358 aa11.38□□□□□ -0.59
SP1-203ENST00000548560 CALD1Q05682 793 aaKnown RBP11.38□□□□□ -0.59
SP1-203ENST00000548560 TRAPPC3LQ5T215 181 aa11.38□□□□□ -0.59
SP1-203ENST00000548560 NPM2Q86SE8 214 aaKnown RBP11.38□□□□□ -0.59
SP1-203ENST00000548560 FAM9BQ8IZU0 186 aa11.38□□□□□ -0.59
SP1-203ENST00000548560 CHD4Q14839 1912 aa11.38□□□□□ -0.59
SP1-203ENST00000548560 KCNQ3O43525 872 aa11.37□□□□□ -0.59
SP1-203ENST00000548560 SNRPA1P09661 255 aaKnown RBP11.37□□□□□ -0.59
SP1-203ENST00000548560 CYP19A1P11511 503 aaPredicted RBP11.37□□□□□ -0.59
SP1-203ENST00000548560 RFC4P35249 363 aa11.37□□□□□ -0.59
SP1-203ENST00000548560 DIEXFQ68CQ4 756 aaKnown RBP11.37□□□□□ -0.59
SP1-203ENST00000548560 CREBZFQ9NS37 354 aa11.37□□□□□ -0.59
SP1-203ENST00000548560 BABAM1Q9NWV8 329 aa11.37□□□□□ -0.59
SP1-203ENST00000548560 MIS18AQ9NYP9 233 aa11.37□□□□□ -0.59
SP1-203ENST00000548560 LAS1LQ9Y4W2 734 aaKnown RBP11.37□□□□□ -0.59
SP1-203ENST00000548560 SCN7AQ01118 1682 aa11.36□□□□□ -0.59
SP1-203ENST00000548560 BCORQ6W2J9 1755 aa11.36□□□□□ -0.59
SP1-203ENST00000548560 SGIP1Q9BQI5 828 aa11.36□□□□□ -0.59
SP1-203ENST00000548560 TRIM35Q9UPQ4 493 aa11.36□□□□□ -0.59
SP1-203ENST00000548560 ZBTB1Q9Y2K1 713 aa11.36□□□□□ -0.59
SP1-203ENST00000548560 COL15A1P39059 1388 aa11.36□□□□□ -0.59
SP1-203ENST00000548560 PITPNM1O00562 1244 aa11.35□□□□□ -0.59
SP1-203ENST00000548560 CANXP27824 592 aaKnown RBP11.35□□□□□ -0.59
SP1-203ENST00000548560 MSL1Q68DK7 614 aa11.35□□□□□ -0.59
SP1-203ENST00000548560 INTS5Q6P9B9 1019 aaKnown RBP11.35□□□□□ -0.59
SP1-203ENST00000548560 AMIGO3Q86WK7 504 aa11.35□□□□□ -0.59
SP1-203ENST00000548560 ZNF330Q9Y3S2 320 aaPredicted RBP11.35□□□□□ -0.59
SP1-203ENST00000548560 SOS1Q07889 1333 aaPredicted RBP11.35□□□□□ -0.59
SP1-203ENST00000548560 CCER2I3L3R5 266 aa11.34□□□□□ -0.59
SP1-203ENST00000548560 ZPR1O75312 459 aa11.34□□□□□ -0.59
SP1-203ENST00000548560 SMIM5Q71RC9 77 aa11.34□□□□□ -0.59
SP1-203ENST00000548560 ARHGEF1Q92888 912 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms