RNA–Protein interactions for RNA: ENST00000548434.1

RAPGEF3-217, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-217ENST00000548434 ATP10DQ9P241 1426 aa21.57■■□□□ 1.04
RAPGEF3-217ENST00000548434 DPEP1P16444 411 aa21.57■■□□□ 1.04
RAPGEF3-217ENST00000548434 PRKAR2BP31323 418 aa21.57■■□□□ 1.04
RAPGEF3-217ENST00000548434 NARFQ9UHQ1 456 aa21.57■■□□□ 1.04
RAPGEF3-217ENST00000548434 PARP3Q9Y6F1 533 aa21.57■■□□□ 1.04
RAPGEF3-217ENST00000548434 EIF5P55010 431 aaKnown RBP21.56■■□□□ 1.04
RAPGEF3-217ENST00000548434 USPL1Q5W0Q7 1092 aa21.56■■□□□ 1.04
RAPGEF3-217ENST00000548434 ZNF790Q6PG37 636 aa21.56■■□□□ 1.04
RAPGEF3-217ENST00000548434 HEG1Q9ULI3 1381 aa21.55■■□□□ 1.04
RAPGEF3-217ENST00000548434 COL15A1P39059 1388 aa21.54■■□□□ 1.04
RAPGEF3-217ENST00000548434 KCNQ3O43525 872 aa21.54■■□□□ 1.04
RAPGEF3-217ENST00000548434 FCHSD2O94868 740 aa21.53■■□□□ 1.04
RAPGEF3-217ENST00000548434 NFIXQ14938 502 aa21.52■■□□□ 1.04
RAPGEF3-217ENST00000548434 CFAP53Q96M91 514 aa21.52■■□□□ 1.04
RAPGEF3-217ENST00000548434 DLG5Q8TDM6 1919 aa21.51■■□□□ 1.03
RAPGEF3-217ENST00000548434 SBF1O95248 1867 aa21.51■■□□□ 1.03
RAPGEF3-217ENST00000548434 ZPR1O75312 459 aa21.5■■□□□ 1.03
RAPGEF3-217ENST00000548434 TEFQ10587 303 aa21.5■■□□□ 1.03
RAPGEF3-217ENST00000548434 DLEC1Q9Y238 1755 aa21.5■■□□□ 1.03
RAPGEF3-217ENST00000548434 GIGYF1O75420 1035 aaPredicted RBP21.49■■□□□ 1.03
RAPGEF3-217ENST00000548434 NUDCQ9Y266 331 aa21.49■■□□□ 1.03
RAPGEF3-217ENST00000548434 BCS1LQ9Y276 419 aa21.49■■□□□ 1.03
RAPGEF3-217ENST00000548434 SCN7AQ01118 1682 aa21.48■■□□□ 1.03
RAPGEF3-217ENST00000548434 STARD3NLO95772 234 aa21.48■■□□□ 1.03
RAPGEF3-217ENST00000548434 U2AF1L5P0DN76 240 aaPredicted RBP21.48■■□□□ 1.03
RAPGEF3-217ENST00000548434 U2AF1Q01081 240 aaKnown RBP eCLIP21.48■■□□□ 1.03
RAPGEF3-217ENST00000548434 TEX13AQ9BXU3 409 aaPredicted RBP21.48■■□□□ 1.03
RAPGEF3-217ENST00000548434 ANKRD31Q8N7Z5 1873 aa21.47■■□□□ 1.03
RAPGEF3-217ENST00000548434 CANXP27824 592 aaKnown RBP21.47■■□□□ 1.03
RAPGEF3-217ENST00000548434 CHRNA5P30532 468 aa21.47■■□□□ 1.03
RAPGEF3-217ENST00000548434 TTC5Q8N0Z6 440 aa21.47■■□□□ 1.03
RAPGEF3-217ENST00000548434 PLEKHF1Q96S99 279 aa21.47■■□□□ 1.03
RAPGEF3-217ENST00000548434 A1BGP04217 495 aa21.46■■□□□ 1.03
RAPGEF3-217ENST00000548434 FMNL2Q96PY5 1086 aa21.46■■□□□ 1.03
RAPGEF3-217ENST00000548434 PIM2Q9P1W9 311 aa21.46■■□□□ 1.03
RAPGEF3-217ENST00000548434 USP16Q9Y5T5 823 aa21.46■■□□□ 1.03
RAPGEF3-217ENST00000548434 BTBD11A6QL63 1104 aa21.45■■□□□ 1.02
RAPGEF3-217ENST00000548434 HTATSF1O43719 755 aaKnown RBP21.45■■□□□ 1.02
RAPGEF3-217ENST00000548434 IL6STP40189 918 aaPredicted RBP21.45■■□□□ 1.02
RAPGEF3-217ENST00000548434 MCM10Q7L590 875 aa21.45■■□□□ 1.02
RAPGEF3-217ENST00000548434 BCORQ6W2J9 1755 aa21.44■■□□□ 1.02
RAPGEF3-217ENST00000548434 PRAMEF22A3QJZ6 481 aa21.44■■□□□ 1.02
RAPGEF3-217ENST00000548434 KIF3CO14782 793 aa21.44■■□□□ 1.02
RAPGEF3-217ENST00000548434 SERPINB2P05120 415 aa21.44■■□□□ 1.02
RAPGEF3-217ENST00000548434 DCTN1Q14203 1278 aa21.44■■□□□ 1.02
RAPGEF3-217ENST00000548434 CARMIL3Q8ND23 1372 aa21.43■■□□□ 1.02
RAPGEF3-217ENST00000548434 CAMTA2O94983 1202 aa21.42■■□□□ 1.02
RAPGEF3-217ENST00000548434 TBC1D9BQ66K14 1250 aa21.42■■□□□ 1.02
RAPGEF3-217ENST00000548434 ARHGAP27Q6ZUM4 889 aa21.42■■□□□ 1.02
RAPGEF3-217ENST00000548434 GPBP1L1Q9HC44 474 aaPredicted RBP21.42■■□□□ 1.02
RAPGEF3-217ENST00000548434 A0A087WZG4 1122 aa21.41■■□□□ 1.02
RAPGEF3-217ENST00000548434 DALRD3Q5D0E6 543 aaKnown RBP21.41■■□□□ 1.02
RAPGEF3-217ENST00000548434 TBC1D2BQ9UPU7 963 aa21.41■■□□□ 1.02
RAPGEF3-217ENST00000548434 KDM3BQ7LBC6 1761 aa21.41■■□□□ 1.02
RAPGEF3-217ENST00000548434 NBPF26B4DH59 902 aa21.39■■□□□ 1.01
RAPGEF3-217ENST00000548434 PRELPP51888 382 aa21.39■■□□□ 1.01
RAPGEF3-217ENST00000548434 NBPF10Q6P3W6 841 aaKnown RBP21.39■■□□□ 1.01
RAPGEF3-217ENST00000548434 NBPF15Q8N660 670 aa21.39■■□□□ 1.01
RAPGEF3-217ENST00000548434 TAF7Q15545 349 aaPredicted RBP21.38■■□□□ 1.01
RAPGEF3-217ENST00000548434 ZNF526Q8TF50 670 aaPredicted RBP21.38■■□□□ 1.01
RAPGEF3-217ENST00000548434 COL11A2P13942 1736 aaPredicted RBP21.38■■□□□ 1.01
RAPGEF3-217ENST00000548434 CCDC88AQ3V6T2 1871 aa21.37■■□□□ 1.01
RAPGEF3-217ENST00000548434 SENP3-EIF4A1A0A087X0R7 540 aa21.37■■□□□ 1.01
RAPGEF3-217ENST00000548434 SNRPA1P09661 255 aaKnown RBP21.37■■□□□ 1.01
RAPGEF3-217ENST00000548434 PIP4K2AP48426 406 aaPredicted RBP21.36■■□□□ 1.01
RAPGEF3-217ENST00000548434 C9orf131Q5VYM1 1079 aa21.36■■□□□ 1.01
RAPGEF3-217ENST00000548434 PRR5LQ6MZQ0 368 aa21.36■■□□□ 1.01
RAPGEF3-217ENST00000548434 RTF1Q92541 710 aaKnown RBP21.35■■□□□ 1.01
RAPGEF3-217ENST00000548434 MIS18AQ9NYP9 233 aa21.35■■□□□ 1.01
RAPGEF3-217ENST00000548434 LAMB4A4D0S4 1761 aa21.34■■□□□ 1.01
RAPGEF3-217ENST00000548434 BICDL1Q6ZP65 573 aa21.34■■□□□ 1.01
RAPGEF3-217ENST00000548434 FER1L6Q2WGJ9 1857 aa21.33■■□□□ 1.01
RAPGEF3-217ENST00000548434 NFE2L2Q16236 605 aa21.33■■□□□ 1.01
RAPGEF3-217ENST00000548434 BRIP1Q9BX63 1249 aa21.33■■□□□ 1.01
RAPGEF3-217ENST00000548434 RGL2O15211 777 aa21.32■■□□□ 1
RAPGEF3-217ENST00000548434 CLEC4GQ6UXB4 293 aa21.32■■□□□ 1
RAPGEF3-217ENST00000548434 DZIP3Q86Y13 1208 aaKnown RBP21.32■■□□□ 1
RAPGEF3-217ENST00000548434 C2CD5Q86YS7 1000 aa21.32■■□□□ 1
RAPGEF3-217ENST00000548434 SLX4Q8IY92 1834 aa21.32■■□□□ 1
RAPGEF3-217ENST00000548434 TTLL6Q8N841 843 aa21.31■■□□□ 1
RAPGEF3-217ENST00000548434 NMRK2Q9NPI5 230 aa21.31■■□□□ 1
RAPGEF3-217ENST00000548434 DICER1Q9UPY3 1922 aaKnown RBP21.3■■□□□ 1
RAPGEF3-217ENST00000548434 EIF4A1P60842 406 aaKnown RBP21.3■■□□□ 1
RAPGEF3-217ENST00000548434 RALBP1Q15311 655 aa21.3■■□□□ 1
RAPGEF3-217ENST00000548434 CCDC24Q8N4L8 307 aa21.3■■□□□ 1
RAPGEF3-217ENST00000548434 THUMPD2Q9BTF0 503 aaKnown RBP21.3■■□□□ 1
RAPGEF3-217ENST00000548434 ARFGEF2Q9Y6D5 1785 aa21.3■■□□□ 1
RAPGEF3-217ENST00000548434 NFKBIEO00221 500 aa21.29■■□□□ 1
RAPGEF3-217ENST00000548434 NUP98P52948 1817 aa21.29■■□□□ 1
RAPGEF3-217ENST00000548434 KLRG2A4D1S0 409 aaPredicted RBP21.28■■□□□ 1
RAPGEF3-217ENST00000548434 H0YIN7 160 aa21.28■■□□□ 1
RAPGEF3-217ENST00000548434 HSPA6P17066 643 aa21.28■■□□□ 1
RAPGEF3-217ENST00000548434 RASSF7Q02833 373 aa21.28■■□□□ 1
RAPGEF3-217ENST00000548434 SETDB2Q96T68 719 aa21.28■■□□□ 1
RAPGEF3-217ENST00000548434 PDZRN3Q9UPQ7 1066 aa21.28■■□□□ 1
RAPGEF3-217ENST00000548434 ZNF330Q9Y3S2 320 aaPredicted RBP21.28■■□□□ 1
RAPGEF3-217ENST00000548434 RNF181Q9P0P0 153 aa21.27■■□□□ 1
RAPGEF3-217ENST00000548434 SRGNP10124 158 aa21.26■□□□□ 0.99
RAPGEF3-217ENST00000548434 PDE6BP35913 854 aa21.26■□□□□ 0.99
RAPGEF3-217ENST00000548434 DDX10Q13206 875 aaKnown RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms