RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.22□□□□□ -1.25
PTCH1-216ENST00000548379 SERTM1A2A2V5 107 aa7.21□□□□□ -1.26
PTCH1-216ENST00000548379 SPATA31C2B4DYI2 1134 aa7.21□□□□□ -1.26
PTCH1-216ENST00000548379 NOS2P35228 1153 aa7.21□□□□□ -1.26
PTCH1-216ENST00000548379 SH3PXD2AQ5TCZ1 1133 aa7.21□□□□□ -1.26
PTCH1-216ENST00000548379 RHBDD1Q8TEB9 315 aa7.21□□□□□ -1.26
PTCH1-216ENST00000548379 CHMP7Q8WUX9 453 aaPredicted RBP7.21□□□□□ -1.26
PTCH1-216ENST00000548379 INSM2Q96T92 566 aaPredicted RBP7.21□□□□□ -1.26
PTCH1-216ENST00000548379 QTRT2Q9H974 415 aaKnown RBP7.21□□□□□ -1.26
PTCH1-216ENST00000548379 TNFRSF10BO14763 440 aa7.2□□□□□ -1.26
PTCH1-216ENST00000548379 ABL1P00519 1130 aa7.2□□□□□ -1.26
PTCH1-216ENST00000548379 ARHGAP4P98171 946 aa7.2□□□□□ -1.26
PTCH1-216ENST00000548379 NAA30Q147X3 362 aaPredicted RBP7.2□□□□□ -1.26
PTCH1-216ENST00000548379 NOM1Q5C9Z4 860 aaKnown RBP7.2□□□□□ -1.26
PTCH1-216ENST00000548379 COX20Q5RI15 118 aa7.2□□□□□ -1.26
PTCH1-216ENST00000548379 C16orf46Q6P387 395 aa7.2□□□□□ -1.26
PTCH1-216ENST00000548379 DNAJC14Q6Y2X3 702 aaPredicted RBP7.2□□□□□ -1.26
PTCH1-216ENST00000548379 L3MBTL2Q969R5 705 aa7.2□□□□□ -1.26
PTCH1-216ENST00000548379 NIFKQ9BYG3 293 aaKnown RBP7.2□□□□□ -1.26
PTCH1-216ENST00000548379 H3BRB1 525 aa7.19□□□□□ -1.26
PTCH1-216ENST00000548379 DGAT1O75907 488 aa7.19□□□□□ -1.26
PTCH1-216ENST00000548379 CTSOP43234 321 aaPredicted RBP7.19□□□□□ -1.26
PTCH1-216ENST00000548379 MTMR3Q13615 1198 aa7.19□□□□□ -1.26
PTCH1-216ENST00000548379 MRPL14Q6P1L8 145 aaKnown RBP7.19□□□□□ -1.26
PTCH1-216ENST00000548379 CRIPAKQ8N1N5 446 aa7.19□□□□□ -1.26
PTCH1-216ENST00000548379 C7orf43Q8WVR3 580 aa7.19□□□□□ -1.26
PTCH1-216ENST00000548379 VTI1AQ96AJ9 217 aa7.19□□□□□ -1.26
PTCH1-216ENST00000548379 TUT1Q9H6E5 874 aaKnown RBP7.19□□□□□ -1.26
PTCH1-216ENST00000548379 ANO2Q9NQ90 1003 aa7.19□□□□□ -1.26
PTCH1-216ENST00000548379 CABP1Q9NZU7 370 aa7.19□□□□□ -1.26
PTCH1-216ENST00000548379 LRFN2Q9ULH4 789 aa7.19□□□□□ -1.26
PTCH1-216ENST00000548379 FAM187AA6NFU0 413 aa7.18□□□□□ -1.26
PTCH1-216ENST00000548379 CTC1Q2NKJ3 1217 aa7.18□□□□□ -1.26
PTCH1-216ENST00000548379 C4orf17Q53FE4 359 aa7.18□□□□□ -1.26
PTCH1-216ENST00000548379 WDR44Q5JSH3 913 aa7.18□□□□□ -1.26
PTCH1-216ENST00000548379 C1orf53Q5VUE5 145 aa7.18□□□□□ -1.26
PTCH1-216ENST00000548379 GLYCTKQ8IVS8 523 aa7.18□□□□□ -1.26
PTCH1-216ENST00000548379 RNF217Q8TC41 542 aa7.18□□□□□ -1.26
PTCH1-216ENST00000548379 CHMP3Q9Y3E7 222 aa7.18□□□□□ -1.26
PTCH1-216ENST00000548379 NRG2O14511 850 aaPredicted RBP7.17□□□□□ -1.26
PTCH1-216ENST00000548379 UPP2O95045 317 aa7.17□□□□□ -1.26
PTCH1-216ENST00000548379 TMEM214Q6NUQ4 689 aaKnown RBP7.17□□□□□ -1.26
PTCH1-216ENST00000548379 TRIM46Q7Z4K8 759 aa7.17□□□□□ -1.26
PTCH1-216ENST00000548379 ALDH16A1Q8IZ83 802 aa7.17□□□□□ -1.26
PTCH1-216ENST00000548379 FAM13AO94988 1023 aa7.16□□□□□ -1.26
PTCH1-216ENST00000548379 RTN1Q16799 776 aa7.16□□□□□ -1.26
PTCH1-216ENST00000548379 GNASQ5JWF2 1037 aa7.16□□□□□ -1.26
PTCH1-216ENST00000548379 SLC27A3Q5K4L6 730 aa7.16□□□□□ -1.26
PTCH1-216ENST00000548379 PHACTR1Q9C0D0 580 aa7.16□□□□□ -1.26
PTCH1-216ENST00000548379 POLMQ9NP87 494 aaPredicted RBP7.16□□□□□ -1.26
PTCH1-216ENST00000548379 ZDHHC3Q9NYG2 299 aa7.16□□□□□ -1.26
PTCH1-216ENST00000548379 HCN4Q9Y3Q4 1203 aa7.16□□□□□ -1.26
PTCH1-216ENST00000548379 PARP3Q9Y6F1 533 aa7.16□□□□□ -1.26
PTCH1-216ENST00000548379 SOS2Q07890 1332 aaPredicted RBP7.16□□□□□ -1.26
PTCH1-216ENST00000548379 BMP2P12643 396 aa7.15□□□□□ -1.26
PTCH1-216ENST00000548379 ERCC3P19447 782 aa7.15□□□□□ -1.26
PTCH1-216ENST00000548379 MPSTP25325 297 aa7.15□□□□□ -1.26
PTCH1-216ENST00000548379 GTF2E1P29083 439 aaPredicted RBP7.15□□□□□ -1.26
PTCH1-216ENST00000548379 TXLNAP40222 546 aa7.15□□□□□ -1.26
PTCH1-216ENST00000548379 MARSP56192 900 aaKnown RBP7.15□□□□□ -1.26
PTCH1-216ENST00000548379 FAM26DQ5JW98 314 aa7.15□□□□□ -1.26
PTCH1-216ENST00000548379 STIM2Q9P246 746 aa7.15□□□□□ -1.26
PTCH1-216ENST00000548379 BIN2Q9UBW5 565 aaPredicted RBP7.15□□□□□ -1.26
PTCH1-216ENST00000548379 ZNF232Q9UNY5 417 aa7.15□□□□□ -1.26
PTCH1-216ENST00000548379 AMOTL2Q9Y2J4 779 aa7.15□□□□□ -1.26
PTCH1-216ENST00000548379 GFRA3O60609 400 aa7.14□□□□□ -1.27
PTCH1-216ENST00000548379 NBPF10Q6P3W6 841 aaKnown RBP7.14□□□□□ -1.27
PTCH1-216ENST00000548379 GPC6Q9Y625 555 aaPredicted RBP7.14□□□□□ -1.27
PTCH1-216ENST00000548379 TTLL8A6PVC2 850 aa7.13□□□□□ -1.27
PTCH1-216ENST00000548379 BMP1P13497 986 aa7.13□□□□□ -1.27
PTCH1-216ENST00000548379 PLA2G4AP47712 749 aa7.13□□□□□ -1.27
PTCH1-216ENST00000548379 C11orf91Q3C1V1 193 aa7.13□□□□□ -1.27
PTCH1-216ENST00000548379 C6orf118Q5T5N4 469 aa7.13□□□□□ -1.27
PTCH1-216ENST00000548379 LYSMD3Q7Z3D4 306 aa7.13□□□□□ -1.27
PTCH1-216ENST00000548379 ZBTB39O15060 712 aa7.12□□□□□ -1.27
PTCH1-216ENST00000548379 AXIN1O15169 862 aa7.12□□□□□ -1.27
PTCH1-216ENST00000548379 ATP4AP20648 1035 aa7.12□□□□□ -1.27
PTCH1-216ENST00000548379 BRD2P25440 801 aaKnown RBP7.12□□□□□ -1.27
PTCH1-216ENST00000548379 EIF1AXP47813 144 aaKnown RBP7.12□□□□□ -1.27
PTCH1-216ENST00000548379 POU4F2Q12837 409 aa7.12□□□□□ -1.27
PTCH1-216ENST00000548379 DGKZQ13574 1117 aa7.12□□□□□ -1.27
PTCH1-216ENST00000548379 SCARF1Q14162 830 aa7.12□□□□□ -1.27
PTCH1-216ENST00000548379 PKDCCQ504Y2 493 aa7.12□□□□□ -1.27
PTCH1-216ENST00000548379 ALKBH2Q6NS38 261 aa7.12□□□□□ -1.27
PTCH1-216ENST00000548379 ETFBKMTQ8IXQ9 262 aa7.12□□□□□ -1.27
PTCH1-216ENST00000548379 FOXD4L4Q8WXT5 416 aaPredicted RBP7.12□□□□□ -1.27
PTCH1-216ENST00000548379 NGLY1Q96IV0 654 aa7.12□□□□□ -1.27
PTCH1-216ENST00000548379 DCTN4Q9UJW0 460 aa7.12□□□□□ -1.27
PTCH1-216ENST00000548379 BCS1LQ9Y276 419 aa7.12□□□□□ -1.27
PTCH1-216ENST00000548379 FZD6O60353 706 aa7.11□□□□□ -1.27
PTCH1-216ENST00000548379 LAPTM4AQ15012 233 aa7.11□□□□□ -1.27
PTCH1-216ENST00000548379 NBPF1Q3BBV0 1214 aa7.11□□□□□ -1.27
PTCH1-216ENST00000548379 PRICKLE2Q7Z3G6 844 aa7.11□□□□□ -1.27
PTCH1-216ENST00000548379 NPAS4Q8IUM7 802 aa7.11□□□□□ -1.27
PTCH1-216ENST00000548379 ABTB2Q8N961 1025 aa7.11□□□□□ -1.27
PTCH1-216ENST00000548379 KLRG1Q96E93 195 aa7.11□□□□□ -1.27
PTCH1-216ENST00000548379 ZFP42Q96MM3 310 aa7.11□□□□□ -1.27
PTCH1-216ENST00000548379 ASB16Q96NS5 453 aa7.11□□□□□ -1.27
PTCH1-216ENST00000548379 RBCK1Q9BYM8 510 aa7.11□□□□□ -1.27
PTCH1-216ENST00000548379 IGHA2P01877 340 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms