RNA–Protein interactions for RNA: ENST00000548357.2

SNX29P1-201, Transcript of sorting nexin 29 pseudogene 1, humanhuman

BASIC

Gene SNX29P1, Length 1,007 nt, Biotype unprocessed pseudogene, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29P1-201ENST00000548357 CACNA1SQ13698 1873 aa20.61■□□□□ 0.89
SNX29P1-201ENST00000548357 USPL1Q5W0Q7 1092 aa20.61■□□□□ 0.89
SNX29P1-201ENST00000548357 POLRMTO00411 1230 aaKnown RBP20.6■□□□□ 0.89
SNX29P1-201ENST00000548357 COL11A2P13942 1736 aaPredicted RBP20.6■□□□□ 0.89
SNX29P1-201ENST00000548357 DLG5Q8TDM6 1919 aa20.6■□□□□ 0.89
SNX29P1-201ENST00000548357 COL15A1P39059 1388 aa20.59■□□□□ 0.89
SNX29P1-201ENST00000548357 BCORQ6W2J9 1755 aa20.59■□□□□ 0.89
SNX29P1-201ENST00000548357 KIF3CO14782 793 aa20.59■□□□□ 0.89
SNX29P1-201ENST00000548357 TM4SF1P30408 202 aa20.59■□□□□ 0.89
SNX29P1-201ENST00000548357 CHRNA5P30532 468 aa20.59■□□□□ 0.89
SNX29P1-201ENST00000548357 BCL2L12Q9HB09 334 aa20.59■□□□□ 0.89
SNX29P1-201ENST00000548357 U2SURPO15042 1029 aaKnown RBP20.58■□□□□ 0.89
SNX29P1-201ENST00000548357 FCHSD2O94868 740 aa20.58■□□□□ 0.89
SNX29P1-201ENST00000548357 ARHGAP27Q6ZUM4 889 aa20.57■□□□□ 0.88
SNX29P1-201ENST00000548357 IL17REQ8NFR9 667 aa20.57■□□□□ 0.88
SNX29P1-201ENST00000548357 CARMIL3Q8ND23 1372 aa20.56■□□□□ 0.88
SNX29P1-201ENST00000548357 NFIXQ14938 502 aa20.55■□□□□ 0.88
SNX29P1-201ENST00000548357 TIAM2Q8IVF5 1701 aa20.55■□□□□ 0.88
SNX29P1-201ENST00000548357 PHACTR3Q96KR7 559 aa20.54■□□□□ 0.88
SNX29P1-201ENST00000548357 NARFQ9UHQ1 456 aa20.54■□□□□ 0.88
SNX29P1-201ENST00000548357 CANXP27824 592 aaKnown RBP20.53■□□□□ 0.88
SNX29P1-201ENST00000548357 ZNF496Q96IT1 587 aaPredicted RBP20.53■□□□□ 0.88
SNX29P1-201ENST00000548357 KCNQ3O43525 872 aa20.52■□□□□ 0.88
SNX29P1-201ENST00000548357 ZPR1O75312 459 aa20.52■□□□□ 0.88
SNX29P1-201ENST00000548357 RSPH6AQ9H0K4 717 aa20.52■□□□□ 0.88
SNX29P1-201ENST00000548357 CEMIPQ8WUJ3 1361 aa20.51■□□□□ 0.87
SNX29P1-201ENST00000548357 HEG1Q9ULI3 1381 aa20.51■□□□□ 0.87
SNX29P1-201ENST00000548357 VSIG10Q8N0Z9 540 aa20.51■□□□□ 0.87
SNX29P1-201ENST00000548357 NMRK2Q9NPI5 230 aa20.51■□□□□ 0.87
SNX29P1-201ENST00000548357 PIM2Q9P1W9 311 aa20.51■□□□□ 0.87
SNX29P1-201ENST00000548357 TNRC6CQ9HCJ0 1690 aaKnown RBP20.51■□□□□ 0.87
SNX29P1-201ENST00000548357 GNAT3A8MTJ3 354 aa20.5■□□□□ 0.87
SNX29P1-201ENST00000548357 PRKAR2BP31323 418 aa20.5■□□□□ 0.87
SNX29P1-201ENST00000548357 C9orf131Q5VYM1 1079 aa20.5■□□□□ 0.87
SNX29P1-201ENST00000548357 DICER1Q9UPY3 1922 aaKnown RBP20.49■□□□□ 0.87
SNX29P1-201ENST00000548357 EIF5P55010 431 aaKnown RBP20.49■□□□□ 0.87
SNX29P1-201ENST00000548357 DALRD3Q5D0E6 543 aaKnown RBP20.49■□□□□ 0.87
SNX29P1-201ENST00000548357 ZNF790Q6PG37 636 aa20.49■□□□□ 0.87
SNX29P1-201ENST00000548357 GAS2L2Q8NHY3 880 aa20.49■□□□□ 0.87
SNX29P1-201ENST00000548357 FER1L6Q2WGJ9 1857 aa20.49■□□□□ 0.87
SNX29P1-201ENST00000548357 WDR90Q96KV7 1748 aa20.48■□□□□ 0.87
SNX29P1-201ENST00000548357 HSPA6P17066 643 aa20.48■□□□□ 0.87
SNX29P1-201ENST00000548357 PRELPP51888 382 aa20.48■□□□□ 0.87
SNX29P1-201ENST00000548357 RASSF7Q02833 373 aa20.48■□□□□ 0.87
SNX29P1-201ENST00000548357 ARFGEF2Q9Y6D5 1785 aa20.48■□□□□ 0.87
SNX29P1-201ENST00000548357 LAMB4A4D0S4 1761 aa20.47■□□□□ 0.87
SNX29P1-201ENST00000548357 SERPINB2P05120 415 aa20.47■□□□□ 0.87
SNX29P1-201ENST00000548357 PPP2R1AP30153 589 aa20.47■□□□□ 0.87
SNX29P1-201ENST00000548357 TEFQ10587 303 aa20.47■□□□□ 0.87
SNX29P1-201ENST00000548357 BICDL1Q6ZP65 573 aa20.47■□□□□ 0.87
SNX29P1-201ENST00000548357 TTC5Q8N0Z6 440 aa20.47■□□□□ 0.87
SNX29P1-201ENST00000548357 SLX4Q8IY92 1834 aa20.46■□□□□ 0.87
SNX29P1-201ENST00000548357 PRAMEF22A3QJZ6 481 aa20.46■□□□□ 0.87
SNX29P1-201ENST00000548357 TBC1D9BQ66K14 1250 aa20.46■□□□□ 0.87
SNX29P1-201ENST00000548357 CCDC24Q8N4L8 307 aa20.46■□□□□ 0.87
SNX29P1-201ENST00000548357 KDM3BQ7LBC6 1761 aa20.46■□□□□ 0.87
SNX29P1-201ENST00000548357 A1BGP04217 495 aa20.45■□□□□ 0.86
SNX29P1-201ENST00000548357 PIP4K2AP48426 406 aaPredicted RBP20.45■□□□□ 0.86
SNX29P1-201ENST00000548357 RNF181Q9P0P0 153 aa20.44■□□□□ 0.86
SNX29P1-201ENST00000548357 TBC1D2BQ9UPU7 963 aa20.44■□□□□ 0.86
SNX29P1-201ENST00000548357 MCM10Q7L590 875 aa20.43■□□□□ 0.86
SNX29P1-201ENST00000548357 ZNF330Q9Y3S2 320 aaPredicted RBP20.43■□□□□ 0.86
SNX29P1-201ENST00000548357 STARD3NLO95772 234 aa20.42■□□□□ 0.86
SNX29P1-201ENST00000548357 DCTN1Q14203 1278 aa20.42■□□□□ 0.86
SNX29P1-201ENST00000548357 C2CD5Q86YS7 1000 aa20.41■□□□□ 0.86
SNX29P1-201ENST00000548357 FMNL2Q96PY5 1086 aa20.41■□□□□ 0.86
SNX29P1-201ENST00000548357 USP16Q9Y5T5 823 aa20.41■□□□□ 0.86
SNX29P1-201ENST00000548357 BTBD11A6QL63 1104 aa20.4■□□□□ 0.86
SNX29P1-201ENST00000548357 U2AF1L5P0DN76 240 aaPredicted RBP20.4■□□□□ 0.86
SNX29P1-201ENST00000548357 NUP98P52948 1817 aa20.4■□□□□ 0.86
SNX29P1-201ENST00000548357 U2AF1Q01081 240 aaKnown RBP eCLIP20.4■□□□□ 0.86
SNX29P1-201ENST00000548357 CFAP53Q96M91 514 aa20.4■□□□□ 0.86
SNX29P1-201ENST00000548357 CAMTA2O94983 1202 aa20.39■□□□□ 0.85
SNX29P1-201ENST00000548357 IL6STP40189 918 aaPredicted RBP20.39■□□□□ 0.85
SNX29P1-201ENST00000548357 PRR5LQ6MZQ0 368 aa20.39■□□□□ 0.85
SNX29P1-201ENST00000548357 TOMM70O94826 608 aa20.38■□□□□ 0.85
SNX29P1-201ENST00000548357 A0A087WZG4 1122 aa20.37■□□□□ 0.85
SNX29P1-201ENST00000548357 NFKBIEO00221 500 aa20.37■□□□□ 0.85
SNX29P1-201ENST00000548357 HTRA3P83110 453 aa20.36■□□□□ 0.85
SNX29P1-201ENST00000548357 TTLL6Q8N841 843 aa20.36■□□□□ 0.85
SNX29P1-201ENST00000548357 TEX13AQ9BXU3 409 aaPredicted RBP20.36■□□□□ 0.85
SNX29P1-201ENST00000548357 RRAGCQ9HB90 399 aa20.36■□□□□ 0.85
SNX29P1-201ENST00000548357 ZNF219Q9P2Y4 722 aaPredicted RBP20.35■□□□□ 0.85
SNX29P1-201ENST00000548357 NBPF26B4DH59 902 aa20.34■□□□□ 0.85
SNX29P1-201ENST00000548357 NBPF10Q6P3W6 841 aaKnown RBP20.34■□□□□ 0.85
SNX29P1-201ENST00000548357 DZIP3Q86Y13 1208 aaKnown RBP20.34■□□□□ 0.85
SNX29P1-201ENST00000548357 NBPF15Q8N660 670 aa20.34■□□□□ 0.85
SNX29P1-201ENST00000548357 NUDCQ9Y266 331 aa20.34■□□□□ 0.85
SNX29P1-201ENST00000548357 H0YIN7 160 aa20.33■□□□□ 0.85
SNX29P1-201ENST00000548357 MIS18AQ9NYP9 233 aa20.33■□□□□ 0.85
SNX29P1-201ENST00000548357 PCNTO95613 3336 aa20.32■□□□□ 0.84
SNX29P1-201ENST00000548357 DNAJC5GQ8N7S2 189 aa20.32■□□□□ 0.84
SNX29P1-201ENST00000548357 RBM46Q8TBY0 533 aaKnown RBP20.32■□□□□ 0.84
SNX29P1-201ENST00000548357 ZNF622Q969S3 477 aaKnown RBP eCLIP20.32■□□□□ 0.84
SNX29P1-201ENST00000548357 LMNB1P20700 586 aa20.31■□□□□ 0.84
SNX29P1-201ENST00000548357 BRIP1Q9BX63 1249 aa20.31■□□□□ 0.84
SNX29P1-201ENST00000548357 KDM2BQ8NHM5 1336 aa20.3■□□□□ 0.84
SNX29P1-201ENST00000548357 C21orf2O43822 256 aa20.3■□□□□ 0.84
SNX29P1-201ENST00000548357 APLP1P51693 650 aa20.3■□□□□ 0.84
SNX29P1-201ENST00000548357 RTF1Q92541 710 aaKnown RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms