RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 ABCC10Q5T3U5 1492 aa7.59□□□□□ -1.19
CBX5-203ENST00000547872 TMEM229AB2RXF0 380 aa7.58□□□□□ -1.2
CBX5-203ENST00000547872 BACH1O14867 736 aa7.58□□□□□ -1.2
CBX5-203ENST00000547872 CENPCQ03188 943 aa7.58□□□□□ -1.2
CBX5-203ENST00000547872 CRTC2Q53ET0 693 aaPredicted RBP7.58□□□□□ -1.2
CBX5-203ENST00000547872 LYSMD3Q7Z3D4 306 aa7.58□□□□□ -1.2
CBX5-203ENST00000547872 SIX5Q8N196 739 aa7.58□□□□□ -1.2
CBX5-203ENST00000547872 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.58□□□□□ -1.2
CBX5-203ENST00000547872 PBXIP1Q96AQ6 731 aa7.58□□□□□ -1.2
CBX5-203ENST00000547872 ZSCAN10Q96SZ4 725 aaPredicted RBP7.58□□□□□ -1.2
CBX5-203ENST00000547872 ZNF358Q9NW07 568 aa7.58□□□□□ -1.2
CBX5-203ENST00000547872 SHROOM2Q13796 1616 aa7.58□□□□□ -1.2
CBX5-203ENST00000547872 ADCY10Q96PN6 1610 aa7.57□□□□□ -1.2
CBX5-203ENST00000547872 ZBTB7BO15156 539 aaPredicted RBP7.57□□□□□ -1.2
CBX5-203ENST00000547872 PTK7Q13308 1070 aa7.57□□□□□ -1.2
CBX5-203ENST00000547872 TMEM214Q6NUQ4 689 aaKnown RBP7.57□□□□□ -1.2
CBX5-203ENST00000547872 PRICKLE2Q7Z3G6 844 aa7.57□□□□□ -1.2
CBX5-203ENST00000547872 PRG4Q92954 1404 aaPredicted RBP7.57□□□□□ -1.2
CBX5-203ENST00000547872 GNASQ5JWF2 1037 aa7.56□□□□□ -1.2
CBX5-203ENST00000547872 GRIP2Q9C0E4 1043 aa7.56□□□□□ -1.2
CBX5-203ENST00000547872 SMTNP53814 917 aa7.55□□□□□ -1.2
CBX5-203ENST00000547872 SEC13P55735 322 aa7.55□□□□□ -1.2
CBX5-203ENST00000547872 DPYDQ12882 1025 aa7.55□□□□□ -1.2
CBX5-203ENST00000547872 ANKMY2Q8IV38 441 aa7.55□□□□□ -1.2
CBX5-203ENST00000547872 FHDC1Q9C0D6 1143 aaPredicted RBP7.55□□□□□ -1.2
CBX5-203ENST00000547872 HRH3Q9Y5N1 445 aa7.55□□□□□ -1.2
CBX5-203ENST00000547872 LMTK3Q96Q04 1460 aa7.55□□□□□ -1.2
CBX5-203ENST00000547872 MAPKBP1O60336 1514 aa7.54□□□□□ -1.2
CBX5-203ENST00000547872 SFI1A8K8P3 1242 aa7.54□□□□□ -1.2
CBX5-203ENST00000547872 RHOQP17081 205 aa7.54□□□□□ -1.2
CBX5-203ENST00000547872 TAS1R3Q7RTX0 852 aa7.54□□□□□ -1.2
CBX5-203ENST00000547872 NBPF15Q8N660 670 aa7.54□□□□□ -1.2
CBX5-203ENST00000547872 FAM200AQ8TCP9 573 aa7.54□□□□□ -1.2
CBX5-203ENST00000547872 SLC4A9Q96Q91 983 aa7.54□□□□□ -1.2
CBX5-203ENST00000547872 NOVA2Q9UNW9 492 aaKnown RBP7.54□□□□□ -1.2
CBX5-203ENST00000547872 NUP160Q12769 1436 aa7.53□□□□□ -1.2
CBX5-203ENST00000547872 A6NJY4 79 aa7.53□□□□□ -1.2
CBX5-203ENST00000547872 ATG7O95352 703 aa7.53□□□□□ -1.2
CBX5-203ENST00000547872 POU4F2Q12837 409 aa7.53□□□□□ -1.2
CBX5-203ENST00000547872 SPATA31C2B4DYI2 1134 aa7.52□□□□□ -1.21
CBX5-203ENST00000547872 M0R2N6 131 aa7.52□□□□□ -1.21
CBX5-203ENST00000547872 PPP1R15AO75807 674 aaPredicted RBP7.52□□□□□ -1.21
CBX5-203ENST00000547872 SRPK2P78362 688 aaKnown RBP7.52□□□□□ -1.21
CBX5-203ENST00000547872 PTSQ03393 145 aa7.52□□□□□ -1.21
CBX5-203ENST00000547872 MTFR1Q15390 333 aa7.52□□□□□ -1.21
CBX5-203ENST00000547872 NBPF10Q6P3W6 841 aaKnown RBP7.52□□□□□ -1.21
CBX5-203ENST00000547872 PPARGC1BQ86YN6 1023 aaKnown RBP7.52□□□□□ -1.21
CBX5-203ENST00000547872 TNS4Q8IZW8 715 aa7.52□□□□□ -1.21
CBX5-203ENST00000547872 TSEN2Q8NCE0 465 aaKnown RBP7.52□□□□□ -1.21
CBX5-203ENST00000547872 RHBDD1Q8TEB9 315 aa7.52□□□□□ -1.21
CBX5-203ENST00000547872 FBXO41Q8TF61 875 aa7.52□□□□□ -1.21
CBX5-203ENST00000547872 RUSC2Q8N2Y8 1516 aa7.52□□□□□ -1.21
CBX5-203ENST00000547872 ABCA10Q8WWZ4 1543 aa7.52□□□□□ -1.21
CBX5-203ENST00000547872 ACIN1Q9UKV3 1341 aaKnown RBP7.52□□□□□ -1.21
CBX5-203ENST00000547872 DKK1O94907 266 aa7.51□□□□□ -1.21
CBX5-203ENST00000547872 PHKA2P46019 1235 aa7.51□□□□□ -1.21
CBX5-203ENST00000547872 ELOAQ14241 798 aaKnown RBP7.51□□□□□ -1.21
CBX5-203ENST00000547872 HINFPQ9BQA5 517 aa7.51□□□□□ -1.21
CBX5-203ENST00000547872 NIFKQ9BYG3 293 aaKnown RBP7.51□□□□□ -1.21
CBX5-203ENST00000547872 CDK2AP1O14519 115 aa7.5□□□□□ -1.21
CBX5-203ENST00000547872 WDR44Q5JSH3 913 aa7.5□□□□□ -1.21
CBX5-203ENST00000547872 ARXQ96QS3 562 aa7.5□□□□□ -1.21
CBX5-203ENST00000547872 TIMMDC1Q9NPL8 285 aa7.5□□□□□ -1.21
CBX5-203ENST00000547872 CABP1Q9NZU7 370 aa7.5□□□□□ -1.21
CBX5-203ENST00000547872 SCHIP1Q9P0W5 487 aaPredicted RBP7.5□□□□□ -1.21
CBX5-203ENST00000547872 PPRC1Q5VV67 1664 aaKnown RBP7.5□□□□□ -1.21
CBX5-203ENST00000547872 CUL7Q14999 1698 aa7.49□□□□□ -1.21
CBX5-203ENST00000547872 PLA2G4AP47712 749 aa7.49□□□□□ -1.21
CBX5-203ENST00000547872 EPHA4P54764 986 aa7.49□□□□□ -1.21
CBX5-203ENST00000547872 C4orf17Q53FE4 359 aa7.49□□□□□ -1.21
CBX5-203ENST00000547872 SLC9A9Q8IVB4 645 aa7.49□□□□□ -1.21
CBX5-203ENST00000547872 NXF1Q9UBU9 619 aaKnown RBP7.49□□□□□ -1.21
CBX5-203ENST00000547872 ZMIZ1Q9ULJ6 1067 aa7.49□□□□□ -1.21
CBX5-203ENST00000547872 CHMP3Q9Y3E7 222 aa7.49□□□□□ -1.21
CBX5-203ENST00000547872 FHAD1B1AJZ9 1412 aa7.48□□□□□ -1.21
CBX5-203ENST00000547872 CCDC155Q8N6L0 562 aa7.48□□□□□ -1.21
CBX5-203ENST00000547872 STK32AQ8WU08 396 aa7.48□□□□□ -1.21
CBX5-203ENST00000547872 GAS2L1Q99501 681 aaPredicted RBP7.48□□□□□ -1.21
CBX5-203ENST00000547872 TSPAN10Q9H1Z9 355 aaPredicted RBP7.48□□□□□ -1.21
CBX5-203ENST00000547872 IQSEC3Q9UPP2 1182 aaPredicted RBP7.48□□□□□ -1.21
CBX5-203ENST00000547872 USP3Q9Y6I4 520 aa7.48□□□□□ -1.21
CBX5-203ENST00000547872 SENP3-EIF4A1A0A087X0R7 540 aa7.47□□□□□ -1.21
CBX5-203ENST00000547872 SLC35F4A4IF30 521 aa7.47□□□□□ -1.21
CBX5-203ENST00000547872 CSB-PGBD3P0DP91 1061 aa7.47□□□□□ -1.21
CBX5-203ENST00000547872 FOXK2Q01167 660 aa7.47□□□□□ -1.21
CBX5-203ENST00000547872 TBCELQ5QJ74 424 aa7.47□□□□□ -1.21
CBX5-203ENST00000547872 ZNF232Q9UNY5 417 aa7.47□□□□□ -1.21
CBX5-203ENST00000547872 DYRK1BQ9Y463 629 aa7.47□□□□□ -1.21
CBX5-203ENST00000547872 KIF21BO75037 1637 aa7.46□□□□□ -1.21
CBX5-203ENST00000547872 A0A1B0GTH6 734 aa7.46□□□□□ -1.22
CBX5-203ENST00000547872 TERTO14746 1132 aaKnown RBP7.46□□□□□ -1.22
CBX5-203ENST00000547872 PPP1R12BO60237 982 aaPredicted RBP7.46□□□□□ -1.22
CBX5-203ENST00000547872 PPFIA3O75145 1194 aa7.46□□□□□ -1.22
CBX5-203ENST00000547872 LGR5O75473 907 aa7.46□□□□□ -1.22
CBX5-203ENST00000547872 PSMA6P60900 246 aaKnown RBP7.46□□□□□ -1.22
CBX5-203ENST00000547872 SWI5Q1ZZU3 235 aa7.46□□□□□ -1.22
CBX5-203ENST00000547872 NBPF1Q3BBV0 1214 aa7.46□□□□□ -1.22
CBX5-203ENST00000547872 TMEM164Q5U3C3 297 aa7.46□□□□□ -1.22
CBX5-203ENST00000547872 RIPOR1Q6ZS17 1223 aa7.46□□□□□ -1.22
CBX5-203ENST00000547872 NPAS3Q8IXF0 933 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms