RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 FKBP8Q14318 412 aa18.63■□□□□ 0.57
CCDC59-202ENST00000547758 TNS4Q8IZW8 715 aa18.63■□□□□ 0.57
CCDC59-202ENST00000547758 SRP68Q9UHB9 627 aaKnown RBP18.63■□□□□ 0.57
CCDC59-202ENST00000547758 USP42Q9H9J4 1324 aaKnown RBP18.63■□□□□ 0.57
CCDC59-202ENST00000547758 TIAM2Q8IVF5 1701 aa18.63■□□□□ 0.57
CCDC59-202ENST00000547758 SCN11AQ9UI33 1791 aa18.63■□□□□ 0.57
CCDC59-202ENST00000547758 CRKLP46109 303 aaKnown RBP18.62■□□□□ 0.57
CCDC59-202ENST00000547758 CABP4P57796 275 aa18.62■□□□□ 0.57
CCDC59-202ENST00000547758 SMC1BQ8NDV3 1235 aa18.62■□□□□ 0.57
CCDC59-202ENST00000547758 VIRMAQ69YN4 1812 aaKnown RBP18.61■□□□□ 0.57
CCDC59-202ENST00000547758 CHRNA5P30532 468 aa18.61■□□□□ 0.57
CCDC59-202ENST00000547758 PLEKHO1Q53GL0 409 aaPredicted RBP18.61■□□□□ 0.57
CCDC59-202ENST00000547758 PTCD1O75127 700 aaKnown RBP18.6■□□□□ 0.57
CCDC59-202ENST00000547758 ZNF530Q6P9A1 599 aaPredicted RBP18.6■□□□□ 0.57
CCDC59-202ENST00000547758 ZC3H4Q9UPT8 1303 aaKnown RBP18.59■□□□□ 0.57
CCDC59-202ENST00000547758 TNNT2P45379 298 aaPredicted RBP18.59■□□□□ 0.57
CCDC59-202ENST00000547758 PRELPP51888 382 aa18.59■□□□□ 0.57
CCDC59-202ENST00000547758 NRXN2Q9P2S2 1712 aa18.59■□□□□ 0.57
CCDC59-202ENST00000547758 POLRMTO00411 1230 aaKnown RBP18.58■□□□□ 0.56
CCDC59-202ENST00000547758 AMOTQ4VCS5 1084 aa18.58■□□□□ 0.56
CCDC59-202ENST00000547758 MTHFSP49914 203 aa18.57■□□□□ 0.56
CCDC59-202ENST00000547758 RASSF7Q02833 373 aa18.57■□□□□ 0.56
CCDC59-202ENST00000547758 TM4SF1P30408 202 aa18.56■□□□□ 0.56
CCDC59-202ENST00000547758 C1orf141Q5JVX7 400 aa18.56■□□□□ 0.56
CCDC59-202ENST00000547758 DICER1Q9UPY3 1922 aaKnown RBP18.55■□□□□ 0.56
CCDC59-202ENST00000547758 NFATC2IPQ8NCF5 419 aa18.55■□□□□ 0.56
CCDC59-202ENST00000547758 ZPR1O75312 459 aa18.54■□□□□ 0.56
CCDC59-202ENST00000547758 HSPA1AP0DMV8 641 aaKnown RBP18.54■□□□□ 0.56
CCDC59-202ENST00000547758 HSPA1BP0DMV9 641 aaKnown RBP18.54■□□□□ 0.56
CCDC59-202ENST00000547758 LMNB1P20700 586 aa18.54■□□□□ 0.56
CCDC59-202ENST00000547758 INTS5Q6P9B9 1019 aaKnown RBP18.54■□□□□ 0.56
CCDC59-202ENST00000547758 GLTPD2A6NH11 291 aa18.53■□□□□ 0.56
CCDC59-202ENST00000547758 VEGFAP15692 232 aaPredicted RBP18.53■□□□□ 0.56
CCDC59-202ENST00000547758 USPL1Q5W0Q7 1092 aa18.53■□□□□ 0.56
CCDC59-202ENST00000547758 AEBP1Q8IUX7 1158 aa18.52■□□□□ 0.56
CCDC59-202ENST00000547758 SOS1Q07889 1333 aaPredicted RBP18.51■□□□□ 0.55
CCDC59-202ENST00000547758 DNAJC10Q8IXB1 793 aa18.5■□□□□ 0.55
CCDC59-202ENST00000547758 FER1L6Q2WGJ9 1857 aa18.5■□□□□ 0.55
CCDC59-202ENST00000547758 ANKRD31Q8N7Z5 1873 aa18.5■□□□□ 0.55
CCDC59-202ENST00000547758 PITPNM1O00562 1244 aa18.49■□□□□ 0.55
CCDC59-202ENST00000547758 NFIXQ14938 502 aa18.49■□□□□ 0.55
CCDC59-202ENST00000547758 POLR3GLQ9BT43 218 aa18.49■□□□□ 0.55
CCDC59-202ENST00000547758 COL15A1P39059 1388 aa18.49■□□□□ 0.55
CCDC59-202ENST00000547758 PIP4P2Q8N4L2 257 aa18.48■□□□□ 0.55
CCDC59-202ENST00000547758 TTLL6Q8N841 843 aa18.48■□□□□ 0.55
CCDC59-202ENST00000547758 NARFQ9UHQ1 456 aa18.48■□□□□ 0.55
CCDC59-202ENST00000547758 CACNA1SQ13698 1873 aa18.48■□□□□ 0.55
CCDC59-202ENST00000547758 MRC1P22897 1456 aa18.47■□□□□ 0.55
CCDC59-202ENST00000547758 SULT6B1Q6IMI4 303 aa18.47■□□□□ 0.55
CCDC59-202ENST00000547758 UBR2Q8IWV8 1755 aa18.47■□□□□ 0.55
CCDC59-202ENST00000547758 COL11A2P13942 1736 aaPredicted RBP18.46■□□□□ 0.55
CCDC59-202ENST00000547758 NFKBIEO00221 500 aa18.46■□□□□ 0.55
CCDC59-202ENST00000547758 SERPINB2P05120 415 aa18.46■□□□□ 0.55
CCDC59-202ENST00000547758 CYP19A1P11511 503 aaPredicted RBP18.46■□□□□ 0.55
CCDC59-202ENST00000547758 C2CD5Q86YS7 1000 aa18.46■□□□□ 0.55
CCDC59-202ENST00000547758 CARMIL3Q8ND23 1372 aa18.45■□□□□ 0.54
CCDC59-202ENST00000547758 SLC52A2Q9HAB3 445 aa18.45■□□□□ 0.54
CCDC59-202ENST00000547758 BCL2L12Q9HB09 334 aa18.45■□□□□ 0.54
CCDC59-202ENST00000547758 POTECB2RU33 542 aa18.44■□□□□ 0.54
CCDC59-202ENST00000547758 AKAP4Q5JQC9 854 aa18.44■□□□□ 0.54
CCDC59-202ENST00000547758 ZBTB1Q9Y2K1 713 aa18.44■□□□□ 0.54
CCDC59-202ENST00000547758 H0YIN7 160 aa18.43■□□□□ 0.54
CCDC59-202ENST00000547758 DPY19L2Q6NUT2 758 aa18.43■□□□□ 0.54
CCDC59-202ENST00000547758 SCN7AQ01118 1682 aa18.43■□□□□ 0.54
CCDC59-202ENST00000547758 SLC39A6Q13433 755 aa18.42■□□□□ 0.54
CCDC59-202ENST00000547758 ARFGEF2Q9Y6D5 1785 aa18.42■□□□□ 0.54
CCDC59-202ENST00000547758 MORC1Q86VD1 984 aa18.41■□□□□ 0.54
CCDC59-202ENST00000547758 PANK3Q9H999 370 aa18.41■□□□□ 0.54
CCDC59-202ENST00000547758 LGR6Q9HBX8 967 aa18.41■□□□□ 0.54
CCDC59-202ENST00000547758 IL13P35225 146 aa18.4■□□□□ 0.54
CCDC59-202ENST00000547758 CREBZFQ9NS37 354 aa18.4■□□□□ 0.54
CCDC59-202ENST00000547758 SLX4Q8IY92 1834 aa18.39■□□□□ 0.54
CCDC59-202ENST00000547758 SPDYE2BA6NHP3 402 aa18.39■□□□□ 0.53
CCDC59-202ENST00000547758 RNMTO43148 476 aaKnown RBP18.39■□□□□ 0.53
CCDC59-202ENST00000547758 SPDYE6P0CI01 402 aa18.39■□□□□ 0.53
CCDC59-202ENST00000547758 SPDYE2Q495Y8 402 aa18.39■□□□□ 0.53
CCDC59-202ENST00000547758 ERFEQ4G0M1 354 aa18.39■□□□□ 0.53
CCDC59-202ENST00000547758 MKRN1Q9UHC7 482 aaKnown RBP18.39■□□□□ 0.53
CCDC59-202ENST00000547758 SCN4AP35499 1836 aa18.39■□□□□ 0.53
CCDC59-202ENST00000547758 CHADLQ6NUI6 762 aa18.38■□□□□ 0.53
CCDC59-202ENST00000547758 BICDL1Q6ZP65 573 aa18.38■□□□□ 0.53
CCDC59-202ENST00000547758 VSIG10Q8N0Z9 540 aa18.38■□□□□ 0.53
CCDC59-202ENST00000547758 ZNF622Q969S3 477 aaKnown RBP eCLIP18.38■□□□□ 0.533e-7■□□□□ 9.7
CCDC59-202ENST00000547758 C21orf2O43822 256 aa18.37■□□□□ 0.53
CCDC59-202ENST00000547758 CANXP27824 592 aaKnown RBP18.37■□□□□ 0.53
CCDC59-202ENST00000547758 PDZRN3Q9UPQ7 1066 aa18.37■□□□□ 0.53
CCDC59-202ENST00000547758 PDE6BP35913 854 aa18.36■□□□□ 0.53
CCDC59-202ENST00000547758 MKRN4PQ13434 485 aaPredicted RBP18.36■□□□□ 0.53
CCDC59-202ENST00000547758 LTBP3Q9NS15 1303 aa18.35■□□□□ 0.53
CCDC59-202ENST00000547758 A0A087WZG4 1122 aa18.35■□□□□ 0.53
CCDC59-202ENST00000547758 POTEIP0CG38 1075 aa18.35■□□□□ 0.53
CCDC59-202ENST00000547758 POTEJP0CG39 1038 aa18.35■□□□□ 0.53
CCDC59-202ENST00000547758 EIF5P55010 431 aaKnown RBP18.35■□□□□ 0.53
CCDC59-202ENST00000547758 BRIP1Q9BX63 1249 aa18.35■□□□□ 0.53
CCDC59-202ENST00000547758 TAOK3Q9H2K8 898 aa18.35■□□□□ 0.53
CCDC59-202ENST00000547758 SIPA1L3O60292 1781 aaPredicted RBP18.35■□□□□ 0.53
CCDC59-202ENST00000547758 BCORQ6W2J9 1755 aa18.35■□□□□ 0.53
CCDC59-202ENST00000547758 CNTNAP1P78357 1384 aa18.34■□□□□ 0.53
CCDC59-202ENST00000547758 FOXN1O15353 648 aa18.34■□□□□ 0.53
CCDC59-202ENST00000547758 TBC1D9BQ66K14 1250 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms