RNA–Protein interactions for RNA: ENST00000547381.1

SSH1-206, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-206ENST00000547381 SRP68Q9UHB9 627 aaKnown RBP16.43■□□□□ 0.22
SSH1-206ENST00000547381 ZBTB1Q9Y2K1 713 aa16.43■□□□□ 0.22
SSH1-206ENST00000547381 MAPK8IP3Q9UPT6 1336 aa16.43■□□□□ 0.22
SSH1-206ENST00000547381 FKBP8Q14318 412 aa16.42■□□□□ 0.22
SSH1-206ENST00000547381 CHD4Q14839 1912 aa16.42■□□□□ 0.22
SSH1-206ENST00000547381 COL15A1P39059 1388 aa16.41■□□□□ 0.22
SSH1-206ENST00000547381 A0A087WZG4 1122 aa16.41■□□□□ 0.22
SSH1-206ENST00000547381 YBX3P16989 372 aaKnown RBP eCLIP16.41■□□□□ 0.22
SSH1-206ENST00000547381 TGFB2P61812 414 aa16.41■□□□□ 0.22
SSH1-206ENST00000547381 TAF7Q15545 349 aaPredicted RBP16.41■□□□□ 0.22
SSH1-206ENST00000547381 NFE2L2Q16236 605 aa16.41■□□□□ 0.22
SSH1-206ENST00000547381 USPL1Q5W0Q7 1092 aa16.41■□□□□ 0.22
SSH1-206ENST00000547381 NARFQ9UHQ1 456 aa16.41■□□□□ 0.22
SSH1-206ENST00000547381 CANXP27824 592 aaKnown RBP16.4■□□□□ 0.22
SSH1-206ENST00000547381 DCTN1Q14203 1278 aa16.4■□□□□ 0.22
SSH1-206ENST00000547381 NPM2Q86SE8 214 aaKnown RBP16.4■□□□□ 0.22
SSH1-206ENST00000547381 C10orf71Q711Q0 1435 aa16.39■□□□□ 0.21
SSH1-206ENST00000547381 KCNQ3O43525 872 aa16.39■□□□□ 0.21
SSH1-206ENST00000547381 TM4SF1P30408 202 aa16.39■□□□□ 0.21
SSH1-206ENST00000547381 EIF5P55010 431 aaKnown RBP16.39■□□□□ 0.21
SSH1-206ENST00000547381 PNISRQ8TF01 805 aaKnown RBP16.39■□□□□ 0.21
SSH1-206ENST00000547381 KIF13BQ9NQT8 1826 aa16.38■□□□□ 0.21
SSH1-206ENST00000547381 SNRPA1P09661 255 aaKnown RBP16.38■□□□□ 0.21
SSH1-206ENST00000547381 IL6STP40189 918 aaPredicted RBP16.38■□□□□ 0.21
SSH1-206ENST00000547381 POLRMTO00411 1230 aaKnown RBP16.36■□□□□ 0.21
SSH1-206ENST00000547381 DDR1Q08345 913 aa16.36■□□□□ 0.21
SSH1-206ENST00000547381 PRKRIP1Q9H875 184 aaPredicted RBP16.36■□□□□ 0.21
SSH1-206ENST00000547381 DLG5Q8TDM6 1919 aa16.36■□□□□ 0.21
SSH1-206ENST00000547381 PXDNLA1KZ92 1463 aa16.35■□□□□ 0.21
SSH1-206ENST00000547381 A1BGP04217 495 aa16.35■□□□□ 0.21
SSH1-206ENST00000547381 WDR43Q15061 677 aaKnown RBP eCLIP16.35■□□□□ 0.21
SSH1-206ENST00000547381 A0A0G2JLW4 131 aa16.34■□□□□ 0.21
SSH1-206ENST00000547381 LMOD3Q0VAK6 560 aa16.34■□□□□ 0.21
SSH1-206ENST00000547381 NFIXQ14938 502 aa16.34■□□□□ 0.21
SSH1-206ENST00000547381 ZNF784Q8NCA9 323 aaPredicted RBP16.34■□□□□ 0.21
SSH1-206ENST00000547381 ZNF330Q9Y3S2 320 aaPredicted RBP16.34■□□□□ 0.21
SSH1-206ENST00000547381 USP16Q9Y5T5 823 aa16.34■□□□□ 0.21
SSH1-206ENST00000547381 RIPK4P57078 832 aa16.33■□□□□ 0.2
SSH1-206ENST00000547381 BCL2L12Q9HB09 334 aa16.33■□□□□ 0.2
SSH1-206ENST00000547381 MIS18AQ9NYP9 233 aa16.33■□□□□ 0.2
SSH1-206ENST00000547381 DPEP1P16444 411 aa16.32■□□□□ 0.2
SSH1-206ENST00000547381 TMPOP42166 694 aaKnown RBP16.32■□□□□ 0.2
SSH1-206ENST00000547381 WWC3Q9ULE0 1092 aa16.32■□□□□ 0.2
SSH1-206ENST00000547381 TBC1D2BQ9UPU7 963 aa16.32■□□□□ 0.2
SSH1-206ENST00000547381 PRAMEF22A3QJZ6 481 aa16.31■□□□□ 0.2
SSH1-206ENST00000547381 SERPINB2P05120 415 aa16.31■□□□□ 0.2
SSH1-206ENST00000547381 RUNDC1Q96C34 613 aa16.31■□□□□ 0.2
SSH1-206ENST00000547381 THUMPD2Q9BTF0 503 aaKnown RBP16.31■□□□□ 0.2
SSH1-206ENST00000547381 BCS1LQ9Y276 419 aa16.31■□□□□ 0.2
SSH1-206ENST00000547381 N4BP2Q86UW6 1770 aaPredicted RBP16.31■□□□□ 0.2
SSH1-206ENST00000547381 KIAA1551Q9HCM1 1747 aa16.31■□□□□ 0.2
SSH1-206ENST00000547381 KCNA3P22001 575 aa16.3■□□□□ 0.2
SSH1-206ENST00000547381 DZIP3Q86Y13 1208 aaKnown RBP16.3■□□□□ 0.2
SSH1-206ENST00000547381 BABAM1Q9NWV8 329 aa16.3■□□□□ 0.2
SSH1-206ENST00000547381 PIM2Q9P1W9 311 aa16.3■□□□□ 0.2
SSH1-206ENST00000547381 KDM3BQ7LBC6 1761 aa16.29■□□□□ 0.2
SSH1-206ENST00000547381 GIGYF1O75420 1035 aaPredicted RBP16.29■□□□□ 0.2
SSH1-206ENST00000547381 CAMTA2O94983 1202 aa16.29■□□□□ 0.2
SSH1-206ENST00000547381 EIF4A1P60842 406 aaKnown RBP16.29■□□□□ 0.2
SSH1-206ENST00000547381 CLEC4GQ6UXB4 293 aa16.29■□□□□ 0.2
SSH1-206ENST00000547381 BICDL1Q6ZP65 573 aa16.29■□□□□ 0.2
SSH1-206ENST00000547381 ADAMTS8Q9UP79 889 aa16.29■□□□□ 0.2
SSH1-206ENST00000547381 SCN7AQ01118 1682 aa16.28■□□□□ 0.2
SSH1-206ENST00000547381 RGL2O15211 777 aa16.28■□□□□ 0.2
SSH1-206ENST00000547381 DALRD3Q5D0E6 543 aaKnown RBP16.28■□□□□ 0.2
SSH1-206ENST00000547381 TBC1D9BQ66K14 1250 aa16.28■□□□□ 0.2
SSH1-206ENST00000547381 CCDC146Q8IYE0 955 aa16.28■□□□□ 0.2
SSH1-206ENST00000547381 SETDB2Q96T68 719 aa16.28■□□□□ 0.2
SSH1-206ENST00000547381 TSPYL4Q9UJ04 414 aa16.28■□□□□ 0.2
SSH1-206ENST00000547381 ZNF652Q9Y2D9 606 aa16.28■□□□□ 0.2
SSH1-206ENST00000547381 NRXN2Q9P2S2 1712 aa16.28■□□□□ 0.2
SSH1-206ENST00000547381 CARMIL3Q8ND23 1372 aa16.27■□□□□ 0.2
SSH1-206ENST00000547381 NBPF26B4DH59 902 aa16.27■□□□□ 0.2
SSH1-206ENST00000547381 PIP4K2AP48426 406 aaPredicted RBP16.27■□□□□ 0.2
SSH1-206ENST00000547381 NBPF10Q6P3W6 841 aaKnown RBP16.27■□□□□ 0.2
SSH1-206ENST00000547381 NBPF15Q8N660 670 aa16.27■□□□□ 0.2
SSH1-206ENST00000547381 BRCA1P38398 1863 aaKnown RBP16.27■□□□□ 0.19
SSH1-206ENST00000547381 AFDNP55196 1824 aaKnown RBP16.26■□□□□ 0.19
SSH1-206ENST00000547381 ZNF316A6NFI3 1004 aaPredicted RBP16.26■□□□□ 0.19
SSH1-206ENST00000547381 CHRNA5P30532 468 aa16.26■□□□□ 0.19
SSH1-206ENST00000547381 NEUROD2Q15784 382 aa16.26■□□□□ 0.19
SSH1-206ENST00000547381 PDZRN3Q9UPQ7 1066 aa16.26■□□□□ 0.19
SSH1-206ENST00000547381 LAMB4A4D0S4 1761 aa16.26■□□□□ 0.19
SSH1-206ENST00000547381 ARHGAP27Q6ZUM4 889 aa16.25■□□□□ 0.19
SSH1-206ENST00000547381 BRIP1Q9BX63 1249 aa16.25■□□□□ 0.19
SSH1-206ENST00000547381 RRP7AQ9Y3A4 280 aaKnown RBP16.25■□□□□ 0.19
SSH1-206ENST00000547381 H0YIN7 160 aa16.24■□□□□ 0.19
SSH1-206ENST00000547381 NPHP1O15259 732 aa16.24■□□□□ 0.19
SSH1-206ENST00000547381 PDE6BP35913 854 aa16.24■□□□□ 0.19
SSH1-206ENST00000547381 BCORQ6W2J9 1755 aa16.23■□□□□ 0.19
SSH1-206ENST00000547381 ERBB4Q15303 1308 aa16.23■□□□□ 0.19
SSH1-206ENST00000547381 C2CD5Q86YS7 1000 aa16.23■□□□□ 0.19
SSH1-206ENST00000547381 CNBD1Q8NA66 436 aa16.23■□□□□ 0.19
SSH1-206ENST00000547381 TRIM35Q9UPQ4 493 aa16.23■□□□□ 0.19
SSH1-206ENST00000547381 ARFGEF1Q9Y6D6 1849 aa16.23■□□□□ 0.19
SSH1-206ENST00000547381 ST5P78524 1137 aa16.22■□□□□ 0.19
SSH1-206ENST00000547381 PRR5LQ6MZQ0 368 aa16.22■□□□□ 0.19
SSH1-206ENST00000547381 TTLL6Q8N841 843 aa16.22■□□□□ 0.19
SSH1-206ENST00000547381 ADCY9O60503 1353 aa16.22■□□□□ 0.19
SSH1-206ENST00000547381 ATP10DQ9P241 1426 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms