RNA–Protein interactions for RNA: ENST00000547281.5

CDK4-204, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-204ENST00000547281 PXDNLA1KZ92 1463 aa21.58■■□□□ 1.04
CDK4-204ENST00000547281 TJP1Q07157 1748 aa21.58■■□□□ 1.04
CDK4-204ENST00000547281 BTBD11A6QL63 1104 aa21.57■■□□□ 1.04
CDK4-204ENST00000547281 ARHGAP27Q6ZUM4 889 aa21.57■■□□□ 1.04
CDK4-204ENST00000547281 C10orf71Q711Q0 1435 aa21.56■■□□□ 1.04
CDK4-204ENST00000547281 KCPQ6ZWJ8 1503 aa21.56■■□□□ 1.04
CDK4-204ENST00000547281 ZNF526Q8TF50 670 aaPredicted RBP21.56■■□□□ 1.04
CDK4-204ENST00000547281 FMNL2Q96PY5 1086 aa21.56■■□□□ 1.04
CDK4-204ENST00000547281 COL15A1P39059 1388 aa21.56■■□□□ 1.04
CDK4-204ENST00000547281 POLRMTO00411 1230 aaKnown RBP21.55■■□□□ 1.04
CDK4-204ENST00000547281 NPM2Q86SE8 214 aaKnown RBP21.55■■□□□ 1.04
CDK4-204ENST00000547281 GPBP1L1Q9HC44 474 aaPredicted RBP21.55■■□□□ 1.04
CDK4-204ENST00000547281 PIM2Q9P1W9 311 aa21.55■■□□□ 1.04
CDK4-204ENST00000547281 ZNF330Q9Y3S2 320 aaPredicted RBP21.55■■□□□ 1.04
CDK4-204ENST00000547281 C4AP0C0L4 1744 aa21.55■■□□□ 1.04
CDK4-204ENST00000547281 ATP10DQ9P241 1426 aa21.55■■□□□ 1.04
CDK4-204ENST00000547281 HEG1Q9ULI3 1381 aa21.54■■□□□ 1.04
CDK4-204ENST00000547281 A0A087WZG4 1122 aa21.54■■□□□ 1.04
CDK4-204ENST00000547281 NEFMP07197 916 aa21.54■■□□□ 1.04
CDK4-204ENST00000547281 ADAMTS7Q9UKP4 1686 aa21.53■■□□□ 1.04
CDK4-204ENST00000547281 KCNQ3O43525 872 aa21.53■■□□□ 1.04
CDK4-204ENST00000547281 NFIXQ14938 502 aa21.53■■□□□ 1.04
CDK4-204ENST00000547281 MCM10Q7L590 875 aa21.53■■□□□ 1.04
CDK4-204ENST00000547281 CEMIPQ8WUJ3 1361 aa21.52■■□□□ 1.04
CDK4-204ENST00000547281 SENP3-EIF4A1A0A087X0R7 540 aa21.52■■□□□ 1.04
CDK4-204ENST00000547281 KCNA3P22001 575 aa21.52■■□□□ 1.04
CDK4-204ENST00000547281 EIF5P55010 431 aaKnown RBP21.52■■□□□ 1.04
CDK4-204ENST00000547281 DALRD3Q5D0E6 543 aaKnown RBP21.52■■□□□ 1.04
CDK4-204ENST00000547281 VIRMAQ69YN4 1812 aaKnown RBP21.51■■□□□ 1.03
CDK4-204ENST00000547281 CHRNA5P30532 468 aa21.51■■□□□ 1.03
CDK4-204ENST00000547281 BICDL1Q6ZP65 573 aa21.51■■□□□ 1.03
CDK4-204ENST00000547281 A1BGP04217 495 aa21.5■■□□□ 1.03
CDK4-204ENST00000547281 SERPINB2P05120 415 aa21.5■■□□□ 1.03
CDK4-204ENST00000547281 DCTN1Q14203 1278 aa21.5■■□□□ 1.03
CDK4-204ENST00000547281 BCL2L12Q9HB09 334 aa21.5■■□□□ 1.03
CDK4-204ENST00000547281 TBC1D2BQ9UPU7 963 aa21.5■■□□□ 1.03
CDK4-204ENST00000547281 N4BP2Q86UW6 1770 aaPredicted RBP21.5■■□□□ 1.03
CDK4-204ENST00000547281 HTATSF1O43719 755 aaKnown RBP21.49■■□□□ 1.03
CDK4-204ENST00000547281 KIF13BQ9NQT8 1826 aa21.48■■□□□ 1.03
CDK4-204ENST00000547281 IL6STP40189 918 aaPredicted RBP21.48■■□□□ 1.03
CDK4-204ENST00000547281 USP16Q9Y5T5 823 aa21.47■■□□□ 1.03
CDK4-204ENST00000547281 SNRPA1P09661 255 aaKnown RBP21.46■■□□□ 1.03
CDK4-204ENST00000547281 TAF7Q15545 349 aaPredicted RBP21.46■■□□□ 1.03
CDK4-204ENST00000547281 ADCY9O60503 1353 aa21.46■■□□□ 1.03
CDK4-204ENST00000547281 PNNQ9H307 717 aaKnown RBP21.45■■□□□ 1.02
CDK4-204ENST00000547281 UBR2Q8IWV8 1755 aa21.45■■□□□ 1.02
CDK4-204ENST00000547281 TBC1D9BQ66K14 1250 aa21.44■■□□□ 1.02
CDK4-204ENST00000547281 PRAMEF22A3QJZ6 481 aa21.43■■□□□ 1.02
CDK4-204ENST00000547281 NPHP1O15259 732 aa21.43■■□□□ 1.02
CDK4-204ENST00000547281 C2CD5Q86YS7 1000 aa21.43■■□□□ 1.02
CDK4-204ENST00000547281 MIS18AQ9NYP9 233 aa21.43■■□□□ 1.02
CDK4-204ENST00000547281 KIAA1551Q9HCM1 1747 aa21.43■■□□□ 1.02
CDK4-204ENST00000547281 H0YIN7 160 aa21.42■■□□□ 1.02
CDK4-204ENST00000547281 PIP4K2AP48426 406 aaPredicted RBP21.42■■□□□ 1.02
CDK4-204ENST00000547281 C9orf131Q5VYM1 1079 aa21.42■■□□□ 1.02
CDK4-204ENST00000547281 DZIP3Q86Y13 1208 aaKnown RBP21.42■■□□□ 1.02
CDK4-204ENST00000547281 SETDB2Q96T68 719 aa21.42■■□□□ 1.02
CDK4-204ENST00000547281 MAPK8IP3Q9UPT6 1336 aa21.41■■□□□ 1.02
CDK4-204ENST00000547281 RALBP1Q15311 655 aa21.41■■□□□ 1.02
CDK4-204ENST00000547281 TTLL6Q8N841 843 aa21.4■■□□□ 1.02
CDK4-204ENST00000547281 PLEKHF1Q96S99 279 aa21.4■■□□□ 1.02
CDK4-204ENST00000547281 SIPA1L3O60292 1781 aaPredicted RBP21.4■■□□□ 1.02
CDK4-204ENST00000547281 CAMTA2O94983 1202 aa21.39■■□□□ 1.01
CDK4-204ENST00000547281 NFE2L2Q16236 605 aa21.39■■□□□ 1.01
CDK4-204ENST00000547281 PNISRQ8TF01 805 aaKnown RBP21.39■■□□□ 1.01
CDK4-204ENST00000547281 CCDC24Q8N4L8 307 aa21.38■■□□□ 1.01
CDK4-204ENST00000547281 RNF181Q9P0P0 153 aa21.38■■□□□ 1.01
CDK4-204ENST00000547281 PDE6BP35913 854 aa21.37■■□□□ 1.01
CDK4-204ENST00000547281 ZNF622Q969S3 477 aaKnown RBP eCLIP21.37■■□□□ 1.01
CDK4-204ENST00000547281 BRIP1Q9BX63 1249 aa21.37■■□□□ 1.01
CDK4-204ENST00000547281 CARMIL3Q8ND23 1372 aa21.36■■□□□ 1.01
CDK4-204ENST00000547281 PRR5LQ6MZQ0 368 aa21.36■■□□□ 1.01
CDK4-204ENST00000547281 CNBD1Q8NA66 436 aa21.36■■□□□ 1.01
CDK4-204ENST00000547281 PDZRN3Q9UPQ7 1066 aa21.36■■□□□ 1.01
CDK4-204ENST00000547281 ZNF652Q9Y2D9 606 aa21.36■■□□□ 1.01
CDK4-204ENST00000547281 KIF3CO14782 793 aa21.35■■□□□ 1.01
CDK4-204ENST00000547281 CLEC4GQ6UXB4 293 aa21.35■■□□□ 1.01
CDK4-204ENST00000547281 THUMPD2Q9BTF0 503 aaKnown RBP21.35■■□□□ 1.01
CDK4-204ENST00000547281 ZNF316A6NFI3 1004 aaPredicted RBP21.34■■□□□ 1.01
CDK4-204ENST00000547281 ST5P78524 1137 aa21.34■■□□□ 1.01
CDK4-204ENST00000547281 AFDNP55196 1824 aaKnown RBP21.34■■□□□ 1.01
CDK4-204ENST00000547281 BRCA1P38398 1863 aaKnown RBP21.33■■□□□ 1.01
CDK4-204ENST00000547281 NBPF26B4DH59 902 aa21.33■■□□□ 1.01
CDK4-204ENST00000547281 NBPF10Q6P3W6 841 aaKnown RBP21.33■■□□□ 1.01
CDK4-204ENST00000547281 NBPF5PQ86XG9 351 aaPredicted RBP21.33■■□□□ 1.01
CDK4-204ENST00000547281 NGEFQ8N5V2 710 aa21.33■■□□□ 1.01
CDK4-204ENST00000547281 NBPF15Q8N660 670 aa21.33■■□□□ 1.01
CDK4-204ENST00000547281 RIPK4P57078 832 aa21.32■■□□□ 1
CDK4-204ENST00000547281 NMRK2Q9NPI5 230 aa21.32■■□□□ 1
CDK4-204ENST00000547281 ZNF219Q9P2Y4 722 aaPredicted RBP21.32■■□□□ 1
CDK4-204ENST00000547281 MYBBP1AQ9BQG0 1328 aaKnown RBP21.31■■□□□ 1
CDK4-204ENST00000547281 EIF4A1P60842 406 aaKnown RBP21.31■■□□□ 1
CDK4-204ENST00000547281 RASSF7Q02833 373 aa21.31■■□□□ 1
CDK4-204ENST00000547281 ARFGEF1Q9Y6D6 1849 aa21.31■■□□□ 1
CDK4-204ENST00000547281 KDM2BQ8NHM5 1336 aa21.3■■□□□ 1
CDK4-204ENST00000547281 NRXN2Q9P2S2 1712 aa21.3■■□□□ 1
CDK4-204ENST00000547281 LMNB1P20700 586 aa21.3■■□□□ 1
CDK4-204ENST00000547281 C16orf71Q8IYS4 520 aaPredicted RBP21.3■■□□□ 1
CDK4-204ENST00000547281 NIP7Q9Y221 180 aaKnown RBP eCLIP21.3■■□□□ 1
CDK4-204ENST00000547281 RRP7AQ9Y3A4 280 aaKnown RBP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms