RNA–Protein interactions for RNA: ENST00000547235.5

NPIPB12-202, Transcript of nuclear pore complex interacting protein family, member B12, humanhuman

TSL 3

Gene NPIPB12, Length 710 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB12-202ENST00000547235 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.02□□□□□ -0.33
NPIPB12-202ENST00000547235 CYP27B1O15528 508 aa13.02□□□□□ -0.33
NPIPB12-202ENST00000547235 PHF14O94880 888 aa13.02□□□□□ -0.33
NPIPB12-202ENST00000547235 ZNF853P0CG23 659 aa13.02□□□□□ -0.33
NPIPB12-202ENST00000547235 SSFA2P28290 1259 aa13.02□□□□□ -0.33
NPIPB12-202ENST00000547235 TAF7Q15545 349 aaPredicted RBP13.02□□□□□ -0.33
NPIPB12-202ENST00000547235 JMYQ8N9B5 988 aa13.02□□□□□ -0.33
NPIPB12-202ENST00000547235 RBM46Q8TBY0 533 aaKnown RBP13.02□□□□□ -0.33
NPIPB12-202ENST00000547235 DCAF5Q96JK2 942 aa13.02□□□□□ -0.33
NPIPB12-202ENST00000547235 LGR6Q9HBX8 967 aa13.02□□□□□ -0.33
NPIPB12-202ENST00000547235 BABAM1Q9NWV8 329 aa13.02□□□□□ -0.33
NPIPB12-202ENST00000547235 CICQ96RK0 1608 aaPredicted RBP13.02□□□□□ -0.33
NPIPB12-202ENST00000547235 C5P01031 1676 aa13.02□□□□□ -0.33
NPIPB12-202ENST00000547235 CHL1O00533 1208 aa13.01□□□□□ -0.33
NPIPB12-202ENST00000547235 TSR2Q969E8 191 aaKnown RBP13.01□□□□□ -0.33
NPIPB12-202ENST00000547235 KLRG1Q96E93 195 aa13.01□□□□□ -0.33
NPIPB12-202ENST00000547235 FANCIQ9NVI1 1328 aa13.01□□□□□ -0.33
NPIPB12-202ENST00000547235 PKD1L3Q7Z443 1732 aa13.01□□□□□ -0.33
NPIPB12-202ENST00000547235 CEMIPQ8WUJ3 1361 aa13□□□□□ -0.33
NPIPB12-202ENST00000547235 CAPN15O75808 1086 aa13□□□□□ -0.33
NPIPB12-202ENST00000547235 PRELPP51888 382 aa13□□□□□ -0.33
NPIPB12-202ENST00000547235 AMIGO3Q86WK7 504 aa13□□□□□ -0.33
NPIPB12-202ENST00000547235 C16orf71Q8IYS4 520 aaPredicted RBP13□□□□□ -0.33
NPIPB12-202ENST00000547235 MBIPQ9NS73 344 aa13□□□□□ -0.33
NPIPB12-202ENST00000547235 TSPYL4Q9UJ04 414 aa13□□□□□ -0.33
NPIPB12-202ENST00000547235 CT47B1P0C2W7 299 aaPredicted RBP12.99□□□□□ -0.33
NPIPB12-202ENST00000547235 TGFB2P61812 414 aa12.99□□□□□ -0.33
NPIPB12-202ENST00000547235 FSTL1Q12841 308 aa12.99□□□□□ -0.33
NPIPB12-202ENST00000547235 NKX1-1Q15270 411 aaPredicted RBP12.99□□□□□ -0.33
NPIPB12-202ENST00000547235 TNS4Q8IZW8 715 aa12.99□□□□□ -0.33
NPIPB12-202ENST00000547235 NMRK2Q9NPI5 230 aa12.99□□□□□ -0.33
NPIPB12-202ENST00000547235 RCAN3Q9UKA8 241 aa12.99□□□□□ -0.33
NPIPB12-202ENST00000547235 EXOSC9Q06265 439 aaKnown RBP12.98□□□□□ -0.33
NPIPB12-202ENST00000547235 BCS1LQ9Y276 419 aa12.98□□□□□ -0.33
NPIPB12-202ENST00000547235 C4BP0C0L5 1744 aa12.98□□□□□ -0.33
NPIPB12-202ENST00000547235 BTBD11A6QL63 1104 aa12.97□□□□□ -0.33
NPIPB12-202ENST00000547235 ERVV-2B6SEH9 535 aa12.97□□□□□ -0.33
NPIPB12-202ENST00000547235 CABP4P57796 275 aa12.97□□□□□ -0.33
NPIPB12-202ENST00000547235 ARHGAP27Q6ZUM4 889 aa12.97□□□□□ -0.33
NPIPB12-202ENST00000547235 SMIM5Q71RC9 77 aa12.97□□□□□ -0.33
NPIPB12-202ENST00000547235 SLC52A2Q9HAB3 445 aa12.97□□□□□ -0.33
NPIPB12-202ENST00000547235 SUPT16HQ9Y5B9 1047 aaKnown RBP12.97□□□□□ -0.33
NPIPB12-202ENST00000547235 PXDNLA1KZ92 1463 aa12.97□□□□□ -0.33
NPIPB12-202ENST00000547235 MMP10P09238 476 aa12.96□□□□□ -0.33
NPIPB12-202ENST00000547235 MIS18AQ9NYP9 233 aa12.96□□□□□ -0.33
NPIPB12-202ENST00000547235 KDM6AO15550 1401 aaPredicted RBP12.96□□□□□ -0.34
NPIPB12-202ENST00000547235 LOC102724428A0A0B4J2F2 783 aa12.95□□□□□ -0.34
NPIPB12-202ENST00000547235 A0A0G2JLW4 131 aa12.95□□□□□ -0.34
NPIPB12-202ENST00000547235 SIK1P57059 783 aa12.95□□□□□ -0.34
NPIPB12-202ENST00000547235 HTRA3P83110 453 aa12.95□□□□□ -0.34
NPIPB12-202ENST00000547235 LINC00116Q8NCU8 138 aa12.95□□□□□ -0.34
NPIPB12-202ENST00000547235 PIGBQ92521 554 aa12.95□□□□□ -0.34
NPIPB12-202ENST00000547235 ZNF428Q96B54 188 aa12.95□□□□□ -0.34
NPIPB12-202ENST00000547235 TAF1LQ8IZX4 1826 aa12.95□□□□□ -0.34
NPIPB12-202ENST00000547235 WDR90Q96KV7 1748 aa12.94□□□□□ -0.34
NPIPB12-202ENST00000547235 GNPATO15228 680 aa12.94□□□□□ -0.34
NPIPB12-202ENST00000547235 TWISTNBQ3B726 338 aaPredicted RBP12.94□□□□□ -0.34
NPIPB12-202ENST00000547235 NFATC2IPQ8NCF5 419 aa12.94□□□□□ -0.34
NPIPB12-202ENST00000547235 TOGARAM1Q9Y4F4 1720 aa12.93□□□□□ -0.34
NPIPB12-202ENST00000547235 KDM2BQ8NHM5 1336 aa12.93□□□□□ -0.34
NPIPB12-202ENST00000547235 ADAMTS7Q9UKP4 1686 aa12.93□□□□□ -0.34
NPIPB12-202ENST00000547235 NEFLP07196 543 aa12.93□□□□□ -0.34
NPIPB12-202ENST00000547235 C9orf131Q5VYM1 1079 aa12.93□□□□□ -0.34
NPIPB12-202ENST00000547235 NLGN1Q8N2Q7 840 aa12.93□□□□□ -0.34
NPIPB12-202ENST00000547235 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.93□□□□□ -0.34
NPIPB12-202ENST00000547235 CHMP4AQ9BY43 222 aa12.93□□□□□ -0.34
NPIPB12-202ENST00000547235 SCN11AQ9UI33 1791 aa12.93□□□□□ -0.34
NPIPB12-202ENST00000547235 SOS1Q07889 1333 aaPredicted RBP12.92□□□□□ -0.34
NPIPB12-202ENST00000547235 ELL2O00472 640 aaPredicted RBP12.92□□□□□ -0.34
NPIPB12-202ENST00000547235 VAMP4O75379 141 aa12.92□□□□□ -0.34
NPIPB12-202ENST00000547235 UBR3Q6ZT12 1888 aa12.92□□□□□ -0.34
NPIPB12-202ENST00000547235 C10orf71Q711Q0 1435 aa12.92□□□□□ -0.34
NPIPB12-202ENST00000547235 TTC5Q8N0Z6 440 aa12.92□□□□□ -0.34
NPIPB12-202ENST00000547235 C8orf58Q8NAV2 365 aa12.92□□□□□ -0.34
NPIPB12-202ENST00000547235 CCDC87Q9NVE4 849 aa12.92□□□□□ -0.34
NPIPB12-202ENST00000547235 TMOD3Q9NYL9 352 aa12.92□□□□□ -0.34
NPIPB12-202ENST00000547235 MRC1P22897 1456 aa12.91□□□□□ -0.34
NPIPB12-202ENST00000547235 DPEP1P16444 411 aa12.91□□□□□ -0.34
NPIPB12-202ENST00000547235 ATP6V1AP38606 617 aa12.91□□□□□ -0.34
NPIPB12-202ENST00000547235 RARSP54136 660 aaKnown RBP12.91□□□□□ -0.34
NPIPB12-202ENST00000547235 EIF4A1P60842 406 aaKnown RBP12.91□□□□□ -0.34
NPIPB12-202ENST00000547235 ALDH1L2Q3SY69 923 aa12.91□□□□□ -0.34
NPIPB12-202ENST00000547235 TRAPPC3LQ5T215 181 aa12.91□□□□□ -0.34
NPIPB12-202ENST00000547235 ZNF790Q6PG37 636 aa12.91□□□□□ -0.34
NPIPB12-202ENST00000547235 TSPYL6Q8N831 410 aa12.91□□□□□ -0.34
NPIPB12-202ENST00000547235 ITPK1Q13572 414 aa12.9□□□□□ -0.34
NPIPB12-202ENST00000547235 SMC1BQ8NDV3 1235 aa12.9□□□□□ -0.34
NPIPB12-202ENST00000547235 RTCBQ9Y3I0 505 aaKnown RBP12.9□□□□□ -0.34
NPIPB12-202ENST00000547235 KCNQ3O43525 872 aa12.89□□□□□ -0.35
NPIPB12-202ENST00000547235 NPM3O75607 178 aaKnown RBP12.89□□□□□ -0.35
NPIPB12-202ENST00000547235 HOXB7P09629 217 aa12.89□□□□□ -0.35
NPIPB12-202ENST00000547235 RRP1P56182 461 aaKnown RBP12.89□□□□□ -0.35
NPIPB12-202ENST00000547235 SLC39A6Q13433 755 aa12.89□□□□□ -0.35
NPIPB12-202ENST00000547235 KRT24Q2M2I5 525 aa12.89□□□□□ -0.35
NPIPB12-202ENST00000547235 RRAGCQ9HB90 399 aa12.89□□□□□ -0.35
NPIPB12-202ENST00000547235 SMC4Q9NTJ3 1288 aa12.89□□□□□ -0.35
NPIPB12-202ENST00000547235 ASAP1Q9ULH1 1129 aa12.89□□□□□ -0.35
NPIPB12-202ENST00000547235 PARP3Q9Y6F1 533 aa12.89□□□□□ -0.35
NPIPB12-202ENST00000547235 VIRMAQ69YN4 1812 aaKnown RBP12.89□□□□□ -0.35
NPIPB12-202ENST00000547235 RNF123Q5XPI4 1314 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms