RNA–Protein interactions for RNA: ENST00000547201.5

USP25-209, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 2

Gene USP25, Length 757 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-209ENST00000547201 UPP2O95045 317 aa8.36□□□□□ -1.07
USP25-209ENST00000547201 FSHRP23945 695 aa8.36□□□□□ -1.07
USP25-209ENST00000547201 HSPA2P54652 639 aa8.36□□□□□ -1.07
USP25-209ENST00000547201 C6orf118Q5T5N4 469 aa8.36□□□□□ -1.07
USP25-209ENST00000547201 VASH1Q7L8A9 365 aaPredicted RBP8.36□□□□□ -1.07
USP25-209ENST00000547201 TRMT44Q8IYL2 757 aaKnown RBP8.36□□□□□ -1.07
USP25-209ENST00000547201 GPKOWQ92917 476 aaPredicted RBP eCLIP8.36□□□□□ -1.07
USP25-209ENST00000547201 NOS1P29475 1434 aa8.36□□□□□ -1.07
USP25-209ENST00000547201 NEURL4Q96JN8 1562 aa8.35□□□□□ -1.07
USP25-209ENST00000547201 ERBB4Q15303 1308 aa8.35□□□□□ -1.07
USP25-209ENST00000547201 FAM181BA6NEQ2 426 aa8.35□□□□□ -1.07
USP25-209ENST00000547201 MEIOBQ8N635 442 aa8.35□□□□□ -1.07
USP25-209ENST00000547201 CNTLNQ9NXG0 1405 aa8.35□□□□□ -1.07
USP25-209ENST00000547201 WASHC2CQ9Y4E1 1318 aa8.34□□□□□ -1.07
USP25-209ENST00000547201 TMEM131LA2VDJ0 1609 aa8.34□□□□□ -1.07
USP25-209ENST00000547201 MAN1A2O60476 641 aa8.34□□□□□ -1.07
USP25-209ENST00000547201 LINC00528Q8N1L1 170 aa8.34□□□□□ -1.07
USP25-209ENST00000547201 CARD14Q9BXL6 1004 aa8.34□□□□□ -1.07
USP25-209ENST00000547201 ARHGAP31Q2M1Z3 1444 aa8.34□□□□□ -1.07
USP25-209ENST00000547201 ADGRB3O60242 1522 aa8.34□□□□□ -1.08
USP25-209ENST00000547201 TRPM2O94759 1503 aa8.34□□□□□ -1.08
USP25-209ENST00000547201 BMP2P12643 396 aa8.33□□□□□ -1.08
USP25-209ENST00000547201 ZSCAN1Q8NBB4 408 aa8.33□□□□□ -1.08
USP25-209ENST00000547201 TNRQ92752 1358 aa8.33□□□□□ -1.08
USP25-209ENST00000547201 CTDSPL2Q05D32 466 aa8.32□□□□□ -1.08
USP25-209ENST00000547201 CCDC116Q8IYX3 515 aa8.32□□□□□ -1.08
USP25-209ENST00000547201 EMILIN1Q9Y6C2 1016 aa8.32□□□□□ -1.08
USP25-209ENST00000547201 POLR1AO95602 1720 aaPredicted RBP8.32□□□□□ -1.08
USP25-209ENST00000547201 PTPRTO14522 1441 aa8.31□□□□□ -1.08
USP25-209ENST00000547201 VSIG8P0DPA2 414 aa8.31□□□□□ -1.08
USP25-209ENST00000547201 PRKCSHP14314 528 aaPredicted RBP8.31□□□□□ -1.08
USP25-209ENST00000547201 ERFEQ4G0M1 354 aa8.31□□□□□ -1.08
USP25-209ENST00000547201 IFT172Q9UG01 1749 aa8.31□□□□□ -1.08
USP25-209ENST00000547201 A2ML1A8K2U0 1454 aa8.31□□□□□ -1.08
USP25-209ENST00000547201 IQGAP1P46940 1657 aa8.3□□□□□ -1.08
USP25-209ENST00000547201 NRXN3Q9Y4C0 1643 aa8.3□□□□□ -1.08
USP25-209ENST00000547201 LORP23490 312 aaPredicted RBP8.3□□□□□ -1.08
USP25-209ENST00000547201 SKIV2LQ15477 1246 aaKnown RBP8.3□□□□□ -1.08
USP25-209ENST00000547201 TRIM52Q96A61 297 aa8.3□□□□□ -1.08
USP25-209ENST00000547201 TSEN34Q9BSV6 310 aaKnown RBP8.3□□□□□ -1.08
USP25-209ENST00000547201 PCGF6Q9BYE7 350 aa8.3□□□□□ -1.08
USP25-209ENST00000547201 FKBPLQ9UIM3 349 aa8.3□□□□□ -1.08
USP25-209ENST00000547201 STRCP1A6NGW2 1772 aa8.3□□□□□ -1.08
USP25-209ENST00000547201 TRIM26Q12899 539 aaPredicted RBP8.29□□□□□ -1.08
USP25-209ENST00000547201 SH3D19Q5HYK7 790 aa8.29□□□□□ -1.08
USP25-209ENST00000547201 PDXDC2PQ6P474 469 aa8.29□□□□□ -1.08
USP25-209ENST00000547201 LRRN4Q8WUT4 740 aa8.29□□□□□ -1.08
USP25-209ENST00000547201 ARHGAP9Q9BRR9 750 aa8.29□□□□□ -1.08
USP25-209ENST00000547201 DHX57Q6P158 1386 aaKnown RBP8.29□□□□□ -1.08
USP25-209ENST00000547201 RPRD2Q5VT52 1461 aaKnown RBP8.29□□□□□ -1.08
USP25-209ENST00000547201 NEXMIFQ5QGS0 1516 aa8.29□□□□□ -1.08
USP25-209ENST00000547201 UHRF1BP1Q6BDS2 1440 aa8.29□□□□□ -1.08
USP25-209ENST00000547201 SOS2Q07890 1332 aaPredicted RBP8.29□□□□□ -1.08
USP25-209ENST00000547201 KANK1Q14678 1352 aa8.28□□□□□ -1.08
USP25-209ENST00000547201 SLC10A4Q96EP9 437 aa8.28□□□□□ -1.08
USP25-209ENST00000547201 DDRGK1Q96HY6 314 aa8.28□□□□□ -1.08
USP25-209ENST00000547201 SETD1AO15047 1707 aaKnown RBP8.28□□□□□ -1.08
USP25-209ENST00000547201 ZC3H4Q9UPT8 1303 aaKnown RBP8.28□□□□□ -1.08
USP25-209ENST00000547201 PPLO60437 1756 aa8.27□□□□□ -1.08
USP25-209ENST00000547201 ARHGAP23Q9P227 1491 aa8.27□□□□□ -1.09
USP25-209ENST00000547201 IDI1Q13907 227 aa8.27□□□□□ -1.09
USP25-209ENST00000547201 MPHOSPH9Q99550 1183 aa8.27□□□□□ -1.09
USP25-209ENST00000547201 KDM4CQ9H3R0 1056 aa8.27□□□□□ -1.09
USP25-209ENST00000547201 GPBP1L1Q9HC44 474 aaPredicted RBP8.27□□□□□ -1.09
USP25-209ENST00000547201 PGPEP1Q9NXJ5 209 aa8.27□□□□□ -1.09
USP25-209ENST00000547201 DNMT3LQ9UJW3 386 aa8.27□□□□□ -1.09
USP25-209ENST00000547201 CDV3Q9UKY7 258 aaKnown RBP8.27□□□□□ -1.09
USP25-209ENST00000547201 ZFYVE9O95405 1425 aa8.27□□□□□ -1.09
USP25-209ENST00000547201 NLRP1Q9C000 1473 aa8.26□□□□□ -1.09
USP25-209ENST00000547201 ASXL1Q8IXJ9 1541 aa8.26□□□□□ -1.09
USP25-209ENST00000547201 PPFIA3O75145 1194 aa8.26□□□□□ -1.09
USP25-209ENST00000547201 TPRNQ4KMQ1 711 aa8.26□□□□□ -1.09
USP25-209ENST00000547201 PPP1R26Q5T8A7 1209 aaPredicted RBP8.26□□□□□ -1.09
USP25-209ENST00000547201 PPP2R2DQ66LE6 453 aa8.26□□□□□ -1.09
USP25-209ENST00000547201 ZBTB33Q86T24 672 aa8.26□□□□□ -1.09
USP25-209ENST00000547201 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.26□□□□□ -1.09
USP25-209ENST00000547201 KIF1BO60333 1816 aa8.26□□□□□ -1.09
USP25-209ENST00000547201 ANKRD30BQ9BXX2 1392 aa8.25□□□□□ -1.09
USP25-209ENST00000547201 SLIT1O75093 1534 aa8.25□□□□□ -1.09
USP25-209ENST00000547201 KDM5AP29375 1690 aaKnown RBP8.25□□□□□ -1.09
USP25-209ENST00000547201 NR6A1Q15406 480 aa8.25□□□□□ -1.09
USP25-209ENST00000547201 PROCA1Q8NCQ7 364 aaPredicted RBP8.25□□□□□ -1.09
USP25-209ENST00000547201 KCTD15Q96SI1 283 aaPredicted RBP8.25□□□□□ -1.09
USP25-209ENST00000547201 FAM117AQ9C073 453 aa8.25□□□□□ -1.09
USP25-209ENST00000547201 ESF1Q9H501 851 aaKnown RBP8.25□□□□□ -1.09
USP25-209ENST00000547201 SPATA31E1Q6ZUB1 1445 aa8.25□□□□□ -1.09
USP25-209ENST00000547201 TTLL8A6PVC2 850 aa8.24□□□□□ -1.09
USP25-209ENST00000547201 LTKP29376 864 aa8.24□□□□□ -1.09
USP25-209ENST00000547201 DHX9Q08211 1270 aaKnown RBP8.24□□□□□ -1.09
USP25-209ENST00000547201 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.24□□□□□ -1.09
USP25-209ENST00000547201 Q6ZVU0 165 aa8.24□□□□□ -1.09
USP25-209ENST00000547201 SETD1BQ9UPS6 1966 aaKnown RBP8.24□□□□□ -1.09
USP25-209ENST00000547201 AP1G2O75843 785 aa8.23□□□□□ -1.09
USP25-209ENST00000547201 PTK2Q05397 1052 aa8.23□□□□□ -1.09
USP25-209ENST00000547201 CBLBQ13191 982 aa8.23□□□□□ -1.09
USP25-209ENST00000547201 RIMS2Q9UQ26 1411 aa8.22□□□□□ -1.09
USP25-209ENST00000547201 SIN3AQ96ST3 1273 aa8.22□□□□□ -1.09
USP25-209ENST00000547201 GPSM3Q9Y4H4 160 aa8.22□□□□□ -1.09
USP25-209ENST00000547201 XIRP1Q702N8 1843 aaKnown RBP8.22□□□□□ -1.09
USP25-209ENST00000547201 SCAF11Q99590 1463 aaKnown RBP8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms