RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 NOB1Q9ULX3 412 aaKnown RBP20.74■□□□□ 0.91
BRF1-208ENST00000546997 KIF16BQ96L93 1317 aa20.74■□□□□ 0.91
BRF1-208ENST00000546997 PRAMEF22A3QJZ6 481 aa20.74■□□□□ 0.91
BRF1-208ENST00000546997 BRPF1P55201 1214 aaPredicted RBP20.74■□□□□ 0.91
BRF1-208ENST00000546997 NECTIN2Q92692 538 aa20.74■□□□□ 0.91
BRF1-208ENST00000546997 ZNF496Q96IT1 587 aaPredicted RBP20.74■□□□□ 0.91
BRF1-208ENST00000546997 TMOD3Q9NYL9 352 aa20.74■□□□□ 0.91
BRF1-208ENST00000546997 KCPQ6ZWJ8 1503 aa20.73■□□□□ 0.91
BRF1-208ENST00000546997 GIGYF1O75420 1035 aaPredicted RBP20.73■□□□□ 0.91
BRF1-208ENST00000546997 RLBP1P12271 317 aa20.73■□□□□ 0.91
BRF1-208ENST00000546997 SOS1Q07889 1333 aaPredicted RBP20.72■□□□□ 0.91
BRF1-208ENST00000546997 TTC5Q8N0Z6 440 aa20.72■□□□□ 0.91
BRF1-208ENST00000546997 PIGBQ92521 554 aa20.72■□□□□ 0.91
BRF1-208ENST00000546997 CLUAP1Q96AJ1 413 aa20.72■□□□□ 0.91
BRF1-208ENST00000546997 BCL9O00512 1426 aa20.72■□□□□ 0.91
BRF1-208ENST00000546997 TRIM27P14373 513 aa20.72■□□□□ 0.91
BRF1-208ENST00000546997 C8orf34Q49A92 452 aa20.72■□□□□ 0.91
BRF1-208ENST00000546997 ZKSCAN2Q63HK3 967 aa20.72■□□□□ 0.91
BRF1-208ENST00000546997 ZNF772Q68DY9 489 aaPredicted RBP20.72■□□□□ 0.91
BRF1-208ENST00000546997 HOXB7P09629 217 aa20.71■□□□□ 0.91
BRF1-208ENST00000546997 AAMPQ13685 434 aa20.71■□□□□ 0.91
BRF1-208ENST00000546997 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.71■□□□□ 0.91
BRF1-208ENST00000546997 LAMB4A4D0S4 1761 aa20.71■□□□□ 0.91
BRF1-208ENST00000546997 ONECUT3O60422 494 aaPredicted RBP20.7■□□□□ 0.9
BRF1-208ENST00000546997 HDGFL1Q5TGJ6 251 aa20.7■□□□□ 0.9
BRF1-208ENST00000546997 SKAP1Q86WV1 359 aa20.7■□□□□ 0.9
BRF1-208ENST00000546997 SYTL4Q96C24 671 aaPredicted RBP20.7■□□□□ 0.9
BRF1-208ENST00000546997 BRWD3Q6RI45 1802 aa20.7■□□□□ 0.9
BRF1-208ENST00000546997 EIF2S2P20042 333 aaKnown RBP20.7■□□□□ 0.9
BRF1-208ENST00000546997 ILDR1Q86SU0 546 aaPredicted RBP20.7■□□□□ 0.9
BRF1-208ENST00000546997 SLC4A2P04920 1241 aa20.69■□□□□ 0.9
BRF1-208ENST00000546997 PRIM1P49642 420 aaKnown RBP20.69■□□□□ 0.9
BRF1-208ENST00000546997 CCDC30Q5VVM6 783 aa20.69■□□□□ 0.9
BRF1-208ENST00000546997 ATF7IPQ6VMQ6 1270 aa20.69■□□□□ 0.9
BRF1-208ENST00000546997 ACSBG1Q96GR2 724 aa20.68■□□□□ 0.9
BRF1-208ENST00000546997 ASAP1Q9ULH1 1129 aa20.68■□□□□ 0.9
BRF1-208ENST00000546997 FMNL2Q96PY5 1086 aa20.68■□□□□ 0.9
BRF1-208ENST00000546997 IGHDP01880 384 aa20.67■□□□□ 0.9
BRF1-208ENST00000546997 G2E3Q7L622 706 aa20.67■□□□□ 0.9
BRF1-208ENST00000546997 SEPT12Q8IYM1 358 aa20.67■□□□□ 0.9
BRF1-208ENST00000546997 STK31Q9BXU1 1019 aa20.67■□□□□ 0.9
BRF1-208ENST00000546997 FAM182BQ5T319 152 aa20.66■□□□□ 0.9
BRF1-208ENST00000546997 DZIP1LQ8IYY4 767 aaKnown RBP20.66■□□□□ 0.9
BRF1-208ENST00000546997 RGS17Q9UGC6 210 aaPredicted RBP20.66■□□□□ 0.9
BRF1-208ENST00000546997 RGS12O14924 1447 aa20.66■□□□□ 0.9
BRF1-208ENST00000546997 SBF2Q86WG5 1849 aa20.66■□□□□ 0.9
BRF1-208ENST00000546997 IPO8O15397 1037 aaKnown RBP20.66■□□□□ 0.9
BRF1-208ENST00000546997 PTCD1O75127 700 aaKnown RBP20.66■□□□□ 0.9
BRF1-208ENST00000546997 ATG3Q9NT62 314 aa20.66■□□□□ 0.9
BRF1-208ENST00000546997 CHPF2Q9P2E5 772 aa20.66■□□□□ 0.9
BRF1-208ENST00000546997 MVPQ14764 893 aaKnown RBP20.65■□□□□ 0.9
BRF1-208ENST00000546997 FTSJ3Q8IY81 847 aaKnown RBP20.65■□□□□ 0.9
BRF1-208ENST00000546997 SNRPA1P09661 255 aaKnown RBP20.65■□□□□ 0.9
BRF1-208ENST00000546997 ARHGAP45Q92619 1136 aa20.65■□□□□ 0.9
BRF1-208ENST00000546997 KCNQ2O43526 872 aa20.64■□□□□ 0.89
BRF1-208ENST00000546997 ANXA1P04083 346 aa20.64■□□□□ 0.89
BRF1-208ENST00000546997 USP16Q9Y5T5 823 aa20.63■□□□□ 0.89
BRF1-208ENST00000546997 NHSQ6T4R5 1651 aa20.63■□□□□ 0.89
BRF1-208ENST00000546997 RBM6P78332 1123 aaKnown RBP20.63■□□□□ 0.89
BRF1-208ENST00000546997 PROSER3Q2NL68 480 aa20.63■□□□□ 0.89
BRF1-208ENST00000546997 BTAF1O14981 1849 aa20.62■□□□□ 0.89
BRF1-208ENST00000546997 FRAT2O75474 233 aaPredicted RBP20.61■□□□□ 0.89
BRF1-208ENST00000546997 FLIIQ13045 1269 aa20.61■□□□□ 0.89
BRF1-208ENST00000546997 PHAXQ9H814 394 aaKnown RBP20.61■□□□□ 0.89
BRF1-208ENST00000546997 PCDHB15Q9Y5E8 787 aa20.61■□□□□ 0.89
BRF1-208ENST00000546997 ABCC4O15439 1325 aa20.61■□□□□ 0.89
BRF1-208ENST00000546997 PTPRCP08575 1304 aa20.61■□□□□ 0.89
BRF1-208ENST00000546997 L1TD1Q5T7N2 865 aaKnown RBP20.61■□□□□ 0.89
BRF1-208ENST00000546997 PTF1AQ7RTS3 328 aa20.61■□□□□ 0.89
BRF1-208ENST00000546997 TMEM57Q8N5G2 664 aa20.61■□□□□ 0.89
BRF1-208ENST00000546997 PDIA6Q15084 440 aa20.6■□□□□ 0.89
BRF1-208ENST00000546997 DBF4Q9UBU7 674 aaPredicted RBP20.6■□□□□ 0.89
BRF1-208ENST00000546997 TJP1Q07157 1748 aa20.6■□□□□ 0.89
BRF1-208ENST00000546997 API5Q9BZZ5 524 aaKnown RBP20.59■□□□□ 0.89
BRF1-208ENST00000546997 SLC4A3P48751 1232 aa20.59■□□□□ 0.89
BRF1-208ENST00000546997 HOMEZQ8IX15 550 aa20.59■□□□□ 0.89
BRF1-208ENST00000546997 SLC4A9Q96Q91 983 aa20.59■□□□□ 0.89
BRF1-208ENST00000546997 CHMP4AQ9BY43 222 aa20.59■□□□□ 0.89
BRF1-208ENST00000546997 PIP4K2AP48426 406 aaPredicted RBP20.58■□□□□ 0.89
BRF1-208ENST00000546997 POTEAQ6S8J7 498 aa20.58■□□□□ 0.89
BRF1-208ENST00000546997 RBM42Q9BTD8 480 aaKnown RBP20.58■□□□□ 0.89
BRF1-208ENST00000546997 N4BP2Q86UW6 1770 aaPredicted RBP20.58■□□□□ 0.89
BRF1-208ENST00000546997 FKBP5Q13451 457 aaPredicted RBP20.57■□□□□ 0.88
BRF1-208ENST00000546997 ITPRIPQ8IWB1 547 aa20.57■□□□□ 0.88
BRF1-208ENST00000546997 F6X3S4 739 aa20.57■□□□□ 0.88
BRF1-208ENST00000546997 CNKSR2Q8WXI2 1034 aa20.57■□□□□ 0.88
BRF1-208ENST00000546997 DDX21Q9NR30 783 aaKnown RBP eCLIP20.57■□□□□ 0.88
BRF1-208ENST00000546997 DDX19BQ9UMR2 479 aa20.57■□□□□ 0.88
BRF1-208ENST00000546997 RXRBP28702 533 aa20.56■□□□□ 0.88
BRF1-208ENST00000546997 BECN1Q14457 450 aa20.56■□□□□ 0.88
BRF1-208ENST00000546997 MYL6BP14649 208 aa20.55■□□□□ 0.88
BRF1-208ENST00000546997 LRP10Q7Z4F1 713 aa20.55■□□□□ 0.88
BRF1-208ENST00000546997 DNAJC10Q8IXB1 793 aa20.55■□□□□ 0.88
BRF1-208ENST00000546997 PALLDQ8WX93 1383 aa20.54■□□□□ 0.88
BRF1-208ENST00000546997 EIF5BO60841 1220 aaKnown RBP20.54■□□□□ 0.88
BRF1-208ENST00000546997 RGS3P49796 1198 aa20.54■□□□□ 0.88
BRF1-208ENST00000546997 KRT27Q7Z3Y8 459 aa20.54■□□□□ 0.88
BRF1-208ENST00000546997 NBPF26B4DH59 902 aa20.54■□□□□ 0.88
BRF1-208ENST00000546997 NBPF14Q5TI25 921 aa20.54■□□□□ 0.88
BRF1-208ENST00000546997 NBPF10Q6P3W6 841 aaKnown RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms